RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 UNC5CLQ8IV45 518 aa28.44■■■□□ 2.14
GPN3-205ENST00000547323 NRAPQ86VF7 1730 aa28.43■■■□□ 2.14
GPN3-205ENST00000547323 ZNF772Q68DY9 489 aaPredicted RBP28.42■■■□□ 2.14
GPN3-205ENST00000547323 POTEAQ6S8J7 498 aa28.42■■■□□ 2.14
GPN3-205ENST00000547323 EMILIN1Q9Y6C2 1016 aa28.42■■■□□ 2.14
GPN3-205ENST00000547323 QTRT2Q9H974 415 aaKnown RBP28.41■■■□□ 2.14
GPN3-205ENST00000547323 STRN4Q9NRL3 753 aa28.4■■■□□ 2.14
GPN3-205ENST00000547323 POLKQ9UBT6 870 aa28.4■■■□□ 2.14
GPN3-205ENST00000547323 PEAK1Q9H792 1746 aa28.4■■■□□ 2.14
GPN3-205ENST00000547323 AMPHP49418 695 aa28.39■■■□□ 2.14
GPN3-205ENST00000547323 IP6K1Q92551 441 aa28.39■■■□□ 2.14
GPN3-205ENST00000547323 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.38■■■□□ 2.13
GPN3-205ENST00000547323 EVA1CP58658 441 aa28.38■■■□□ 2.13
GPN3-205ENST00000547323 ILDR2Q71H61 639 aa28.38■■■□□ 2.13
GPN3-205ENST00000547323 PPM1GO15355 546 aaPredicted RBP28.37■■■□□ 2.13
GPN3-205ENST00000547323 HOXC9P31274 260 aa28.37■■■□□ 2.13
GPN3-205ENST00000547323 COL5A2P05997 1499 aaPredicted RBP28.36■■■□□ 2.13
GPN3-205ENST00000547323 ATRNO75882 1429 aa28.35■■■□□ 2.13
GPN3-205ENST00000547323 LARP1Q6PKG0 1096 aaKnown RBP28.35■■■□□ 2.13
GPN3-205ENST00000547323 TRPC5Q9UL62 973 aaPredicted RBP28.35■■■□□ 2.13
GPN3-205ENST00000547323 VPS72Q15906 364 aa28.34■■■□□ 2.13
GPN3-205ENST00000547323 HSP90AB2PQ58FF8 381 aa28.34■■■□□ 2.13
GPN3-205ENST00000547323 ABCC6O95255 1503 aa28.33■■■□□ 2.13
GPN3-205ENST00000547323 LTV1Q96GA3 475 aaPredicted RBP28.33■■■□□ 2.13
GPN3-205ENST00000547323 CCDC9Q9Y3X0 531 aaKnown RBP28.33■■■□□ 2.13
GPN3-205ENST00000547323 ANKRD24Q8TF21 1146 aa28.31■■■□□ 2.12
GPN3-205ENST00000547323 RTL1A6NKG5 1358 aa28.3■■■□□ 2.12
GPN3-205ENST00000547323 FLT4P35916 1363 aa28.3■■■□□ 2.12
GPN3-205ENST00000547323 GJD4Q96KN9 370 aaPredicted RBP28.3■■■□□ 2.12
GPN3-205ENST00000547323 BLMP54132 1417 aaPredicted RBP28.29■■■□□ 2.12
GPN3-205ENST00000547323 CSB-PGBD3P0DP91 1061 aa28.29■■■□□ 2.12
GPN3-205ENST00000547323 KIF24Q5T7B8 1368 aa28.28■■■□□ 2.12
GPN3-205ENST00000547323 SPATA31A5Q5VU36 1347 aa28.28■■■□□ 2.12
GPN3-205ENST00000547323 SPATA31A7Q8IWB4 1347 aa28.28■■■□□ 2.12
GPN3-205ENST00000547323 WDR17Q8IZU2 1322 aa28.28■■■□□ 2.12
GPN3-205ENST00000547323 MTHFSP49914 203 aa28.28■■■□□ 2.12
GPN3-205ENST00000547323 ERBB3P21860 1342 aa28.27■■■□□ 2.12
GPN3-205ENST00000547323 USP35Q9P2H5 1018 aa28.27■■■□□ 2.12
GPN3-205ENST00000547323 GLI3P10071 1580 aa28.27■■■□□ 2.12
GPN3-205ENST00000547323 SMG6Q86US8 1419 aaKnown RBP28.26■■■□□ 2.12
GPN3-205ENST00000547323 INSRP06213 1382 aa28.26■■■□□ 2.12
GPN3-205ENST00000547323 PARD3Q8TEW0 1356 aa28.26■■■□□ 2.12
GPN3-205ENST00000547323 RXRBP28702 533 aa28.26■■■□□ 2.11
GPN3-205ENST00000547323 RBM6P78332 1123 aaKnown RBP28.26■■■□□ 2.11
GPN3-205ENST00000547323 TOM1L2Q6ZVM7 507 aa28.26■■■□□ 2.11
GPN3-205ENST00000547323 RGPD2P0DJD1 1756 aa28.26■■■□□ 2.11
GPN3-205ENST00000547323 SPATA31A1Q5TZJ5 1347 aa28.25■■■□□ 2.11
GPN3-205ENST00000547323 PPP2R1AP30153 589 aa28.25■■■□□ 2.11
GPN3-205ENST00000547323 CRB1P82279 1406 aa28.24■■■□□ 2.11
GPN3-205ENST00000547323 NLRP2Q9NX02 1062 aa28.23■■■□□ 2.11
GPN3-205ENST00000547323 RALBP1Q15311 655 aa28.2■■■□□ 2.1
GPN3-205ENST00000547323 CARD10Q9BWT7 1032 aa28.2■■■□□ 2.1
GPN3-205ENST00000547323 CDK12Q9NYV4 1490 aaPredicted RBP28.2■■■□□ 2.1
GPN3-205ENST00000547323 EIF4A2Q14240 407 aaKnown RBP28.19■■■□□ 2.1
GPN3-205ENST00000547323 FAM98CQ17RN3 349 aaKnown RBP28.19■■■□□ 2.1
GPN3-205ENST00000547323 NBPF6Q5VWK0 638 aa28.18■■■□□ 2.1
GPN3-205ENST00000547323 TCP11L2Q8N4U5 519 aa28.18■■■□□ 2.1
GPN3-205ENST00000547323 NBPF4Q96M43 638 aa28.18■■■□□ 2.1
GPN3-205ENST00000547323 PRKRIP1Q9H875 184 aaPredicted RBP28.18■■■□□ 2.1
GPN3-205ENST00000547323 USHBP1Q8N6Y0 703 aa28.16■■■□□ 2.1
GPN3-205ENST00000547323 FAM208AQ9UK61 1670 aaKnown RBP28.16■■■□□ 2.1
GPN3-205ENST00000547323 SOCS7O14512 581 aa28.15■■■□□ 2.1
GPN3-205ENST00000547323 ONECUT3O60422 494 aaPredicted RBP28.14■■■□□ 2.1
GPN3-205ENST00000547323 BARGINQ6ZT62 677 aa28.13■■■□□ 2.09
GPN3-205ENST00000547323 EYA1Q99502 592 aa28.13■■■□□ 2.09
GPN3-205ENST00000547323 IL13P35225 146 aa28.12■■■□□ 2.09
GPN3-205ENST00000547323 THRAP3Q9Y2W1 955 aaKnown RBP28.12■■■□□ 2.09
GPN3-205ENST00000547323 RGS12O14924 1447 aa28.11■■■□□ 2.09
GPN3-205ENST00000547323 SEPT12Q8IYM1 358 aa28.11■■■□□ 2.09
GPN3-205ENST00000547323 COL3A1P02461 1466 aaPredicted RBP28.1■■■□□ 2.09
GPN3-205ENST00000547323 A0A0G2JS52 829 aa28.1■■■□□ 2.09
GPN3-205ENST00000547323 MYT1Q01538 1121 aa28.1■■■□□ 2.09
GPN3-205ENST00000547323 DIAPH1O60610 1272 aaKnown RBP28.09■■■□□ 2.09
GPN3-205ENST00000547323 MYBBP1AQ9BQG0 1328 aaKnown RBP28.09■■■□□ 2.09
GPN3-205ENST00000547323 WNK3Q9BYP7 1800 aa28.08■■■□□ 2.09
GPN3-205ENST00000547323 THSD7AQ9UPZ6 1657 aa28.08■■■□□ 2.09
GPN3-205ENST00000547323 BRWD3Q6RI45 1802 aa28.08■■■□□ 2.09
GPN3-205ENST00000547323 CFAP53Q96M91 514 aa28.07■■■□□ 2.08
GPN3-205ENST00000547323 DISP2A7MBM2 1401 aa28.05■■■□□ 2.08
GPN3-205ENST00000547323 ANP32CO43423 234 aa28.05■■■□□ 2.08
GPN3-205ENST00000547323 IGSF1Q8N6C5 1336 aa28.04■■■□□ 2.08
GPN3-205ENST00000547323 RGPD1P0DJD0 1748 aa28.04■■■□□ 2.08
GPN3-205ENST00000547323 IL2RBP14784 551 aa28.03■■■□□ 2.08
GPN3-205ENST00000547323 NCAPD2Q15021 1401 aa28.02■■■□□ 2.08
GPN3-205ENST00000547323 AEBP1Q8IUX7 1158 aa28.02■■■□□ 2.08
GPN3-205ENST00000547323 PARP4Q9UKK3 1724 aaKnown RBP28.01■■■□□ 2.07
GPN3-205ENST00000547323 CDCA7Q9BWT1 371 aaPredicted RBP28.01■■■□□ 2.07
GPN3-205ENST00000547323 MEGF6O75095 1541 aa28.01■■■□□ 2.07
GPN3-205ENST00000547323 U2SURPO15042 1029 aaKnown RBP28■■■□□ 2.07
GPN3-205ENST00000547323 SULT6B1Q6IMI4 303 aa28■■■□□ 2.07
GPN3-205ENST00000547323 HMOX1P09601 288 aa27.98■■■□□ 2.07
GPN3-205ENST00000547323 DDB1Q16531 1140 aa27.98■■■□□ 2.07
GPN3-205ENST00000547323 RAPGEF4Q8WZA2 1011 aa27.98■■■□□ 2.07
GPN3-205ENST00000547323 LRRC37A3O60309 1634 aa27.98■■■□□ 2.07
GPN3-205ENST00000547323 FAM182BQ5T319 152 aa27.97■■■□□ 2.07
GPN3-205ENST00000547323 EXOC5O00471 708 aa27.96■■■□□ 2.07
GPN3-205ENST00000547323 CCDC184Q52MB2 194 aa27.96■■■□□ 2.07
GPN3-205ENST00000547323 KRT27Q7Z3Y8 459 aa27.96■■■□□ 2.07
GPN3-205ENST00000547323 TATP17735 454 aaPredicted RBP27.95■■■□□ 2.06
GPN3-205ENST00000547323 DIEXFQ68CQ4 756 aaKnown RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms