RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 SBF2Q86WG5 1849 aa14.6□□□□□ -0.07
BEST3-208ENST00000547208 BARGINQ6ZT62 677 aa14.6□□□□□ -0.07
BEST3-208ENST00000547208 SLC12A5Q9H2X9 1139 aa14.6□□□□□ -0.07
BEST3-208ENST00000547208 PEAK1Q9H792 1746 aa14.6□□□□□ -0.07
BEST3-208ENST00000547208 A0A1W2PP64 1363 aa14.6□□□□□ -0.07
BEST3-208ENST00000547208 USP31Q70CQ4 1352 aa14.6□□□□□ -0.07
BEST3-208ENST00000547208 CRB1P82279 1406 aa14.59□□□□□ -0.07
BEST3-208ENST00000547208 EVA1CP58658 441 aa14.59□□□□□ -0.07
BEST3-208ENST00000547208 MYOM1P52179 1685 aa14.58□□□□□ -0.07
BEST3-208ENST00000547208 EDC4Q6P2E9 1401 aaKnown RBP14.58□□□□□ -0.07
BEST3-208ENST00000547208 ARHGEF25Q86VW2 580 aa14.58□□□□□ -0.08
BEST3-208ENST00000547208 USP35Q9P2H5 1018 aa14.58□□□□□ -0.08
BEST3-208ENST00000547208 CLSPNQ9HAW4 1339 aa14.58□□□□□ -0.08
BEST3-208ENST00000547208 USP47Q96K76 1375 aa14.58□□□□□ -0.08
BEST3-208ENST00000547208 R3HDM1Q15032 1099 aaKnown RBP14.57□□□□□ -0.08
BEST3-208ENST00000547208 TCP11L2Q8N4U5 519 aa14.57□□□□□ -0.08
BEST3-208ENST00000547208 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
BEST3-208ENST00000547208 AXIN2Q9Y2T1 843 aa14.57□□□□□ -0.08
BEST3-208ENST00000547208 NME9Q86XW9 330 aa14.56□□□□□ -0.08
BEST3-208ENST00000547208 TMC1Q8TDI8 760 aa14.56□□□□□ -0.08
BEST3-208ENST00000547208 NINLQ9Y2I6 1382 aa14.56□□□□□ -0.08
BEST3-208ENST00000547208 OVOS2A0A0J9YW53 1432 aa14.56□□□□□ -0.08
BEST3-208ENST00000547208 OVOS2Q6IE36 1432 aa14.56□□□□□ -0.08
BEST3-208ENST00000547208 ZBTB7CA1YPR0 619 aa14.55□□□□□ -0.08
BEST3-208ENST00000547208 HOXD11P31277 338 aaPredicted RBP14.55□□□□□ -0.08
BEST3-208ENST00000547208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.55□□□□□ -0.08
BEST3-208ENST00000547208 TIMELESSQ9UNS1 1208 aa14.55□□□□□ -0.08
BEST3-208ENST00000547208 THRAP3Q9Y2W1 955 aaKnown RBP14.55□□□□□ -0.08
BEST3-208ENST00000547208 DISP2A7MBM2 1401 aa14.55□□□□□ -0.08
BEST3-208ENST00000547208 RREB1Q92766 1687 aa14.55□□□□□ -0.08
BEST3-208ENST00000547208 KIF20BQ96Q89 1820 aa14.55□□□□□ -0.08
BEST3-208ENST00000547208 EZH2Q15910 746 aaKnown RBP14.54□□□□□ -0.08
BEST3-208ENST00000547208 PCGF6Q9BYE7 350 aa14.54□□□□□ -0.08
BEST3-208ENST00000547208 WDR17Q8IZU2 1322 aa14.54□□□□□ -0.08
BEST3-208ENST00000547208 SOX12O15370 315 aa14.53□□□□□ -0.08
BEST3-208ENST00000547208 SF3B2Q13435 895 aaKnown RBP14.53□□□□□ -0.08
BEST3-208ENST00000547208 HDGFL2Q7Z4V5 671 aaPredicted RBP14.53□□□□□ -0.08
BEST3-208ENST00000547208 TERF2IPQ9NYB0 399 aa14.53□□□□□ -0.08
BEST3-208ENST00000547208 NUP188Q5SRE5 1749 aa14.52□□□□□ -0.08
BEST3-208ENST00000547208 FAM208AQ9UK61 1670 aaKnown RBP14.52□□□□□ -0.09
BEST3-208ENST00000547208 SLC24A1O60721 1099 aa14.51□□□□□ -0.09
BEST3-208ENST00000547208 FAM196AQ6ZSG2 479 aa14.51□□□□□ -0.09
BEST3-208ENST00000547208 RGPD3A6NKT7 1758 aaPredicted RBP14.51□□□□□ -0.09
BEST3-208ENST00000547208 RGPD2P0DJD1 1756 aa14.51□□□□□ -0.09
BEST3-208ENST00000547208 RGPD4Q7Z3J3 1758 aa14.51□□□□□ -0.09
BEST3-208ENST00000547208 ANKRD36BQ8N2N9 1353 aa14.5□□□□□ -0.09
BEST3-208ENST00000547208 TOM1L2Q6ZVM7 507 aa14.5□□□□□ -0.09
BEST3-208ENST00000547208 BAG6P46379 1132 aa14.49□□□□□ -0.09
BEST3-208ENST00000547208 PDE3BQ13370 1112 aa14.49□□□□□ -0.09
BEST3-208ENST00000547208 TRIM37O94972 964 aa14.48□□□□□ -0.09
BEST3-208ENST00000547208 TMF1P82094 1093 aa14.48□□□□□ -0.09
BEST3-208ENST00000547208 CARD10Q9BWT7 1032 aa14.48□□□□□ -0.09
BEST3-208ENST00000547208 ERBB3P21860 1342 aa14.47□□□□□ -0.09
BEST3-208ENST00000547208 OVOS2A0A0G2JMS6 1433 aa14.47□□□□□ -0.09
BEST3-208ENST00000547208 CAMKK2Q96RR4 588 aa14.46□□□□□ -0.09
BEST3-208ENST00000547208 CCDC7Q96M83 1385 aa14.46□□□□□ -0.1
BEST3-208ENST00000547208 SHANK3Q9BYB0 1731 aa14.45□□□□□ -0.1
BEST3-208ENST00000547208 BCL9O00512 1426 aa14.44□□□□□ -0.1
BEST3-208ENST00000547208 CSB-PGBD3P0DP91 1061 aa14.44□□□□□ -0.1
BEST3-208ENST00000547208 DDB1Q16531 1140 aa14.44□□□□□ -0.1
BEST3-208ENST00000547208 CDCA7Q9BWT1 371 aaPredicted RBP14.44□□□□□ -0.1
BEST3-208ENST00000547208 NHSQ6T4R5 1651 aa14.44□□□□□ -0.1
BEST3-208ENST00000547208 PARD3Q8TEW0 1356 aa14.44□□□□□ -0.1
BEST3-208ENST00000547208 ANKRD26Q9UPS8 1709 aa14.44□□□□□ -0.1
BEST3-208ENST00000547208 TNS2Q63HR2 1409 aa14.43□□□□□ -0.1
BEST3-208ENST00000547208 MARCH10Q8NA82 808 aaPredicted RBP14.43□□□□□ -0.1
BEST3-208ENST00000547208 FYB1O15117 783 aa14.42□□□□□ -0.1
BEST3-208ENST00000547208 APBA3O96018 575 aa14.42□□□□□ -0.1
BEST3-208ENST00000547208 CDCA8Q53HL2 280 aa14.42□□□□□ -0.1
BEST3-208ENST00000547208 IP6K1Q92551 441 aa14.42□□□□□ -0.1
BEST3-208ENST00000547208 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
BEST3-208ENST00000547208 MAP2P11137 1827 aaKnown RBP14.41□□□□□ -0.1
BEST3-208ENST00000547208 C11orf95C9JLR9 678 aaPredicted RBP14.41□□□□□ -0.1
BEST3-208ENST00000547208 FBLN1P23142 703 aa14.41□□□□□ -0.1
BEST3-208ENST00000547208 CCER1Q8TC90 406 aaPredicted RBP14.41□□□□□ -0.1
BEST3-208ENST00000547208 ANKRD24Q8TF21 1146 aa14.41□□□□□ -0.1
BEST3-208ENST00000547208 COG3Q96JB2 828 aa14.41□□□□□ -0.1
BEST3-208ENST00000547208 PTF1AQ7RTS3 328 aa14.4□□□□□ -0.1
BEST3-208ENST00000547208 CARD14Q9BXL6 1004 aa14.4□□□□□ -0.1
BEST3-208ENST00000547208 BTAF1O14981 1849 aa14.4□□□□□ -0.1
BEST3-208ENST00000547208 PDGFDQ9GZP0 370 aaPredicted RBP14.39□□□□□ -0.11
BEST3-208ENST00000547208 GGNBP2Q9H3C7 697 aa14.39□□□□□ -0.11
BEST3-208ENST00000547208 NLRP2Q9NX02 1062 aa14.39□□□□□ -0.11
BEST3-208ENST00000547208 NSD3Q9BZ95 1437 aa14.39□□□□□ -0.11
BEST3-208ENST00000547208 RTL1A6NKG5 1358 aa14.38□□□□□ -0.11
BEST3-208ENST00000547208 HOXC9P31274 260 aa14.38□□□□□ -0.11
BEST3-208ENST00000547208 KAT6BQ8WYB5 2073 aa14.37□□□□□ -0.11
BEST3-208ENST00000547208 EXOC5O00471 708 aa14.37□□□□□ -0.11
BEST3-208ENST00000547208 IL2RBP14784 551 aa14.37□□□□□ -0.11
BEST3-208ENST00000547208 YY1P25490 414 aa14.37□□□□□ -0.11
BEST3-208ENST00000547208 DOT1LQ8TEK3 1739 aa14.37□□□□□ -0.11
BEST3-208ENST00000547208 RRS1Q15050 365 aaKnown RBP14.36□□□□□ -0.11
BEST3-208ENST00000547208 BCL11BQ9C0K0 894 aaPredicted RBP14.36□□□□□ -0.11
BEST3-208ENST00000547208 CASZ1Q86V15 1759 aa14.36□□□□□ -0.11
BEST3-208ENST00000547208 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
BEST3-208ENST00000547208 PLSCR1O15162 318 aa14.35□□□□□ -0.11
BEST3-208ENST00000547208 HSPA5P11021 654 aaKnown RBP14.35□□□□□ -0.11
BEST3-208ENST00000547208 LTV1Q96GA3 475 aaPredicted RBP14.35□□□□□ -0.11
BEST3-208ENST00000547208 MEGF6O75095 1541 aa14.35□□□□□ -0.11
BEST3-208ENST00000547208 AMPHP49418 695 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms