RNA–Protein interactions for RNA: ENST00000546842.5

NR4A1-207, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-207ENST00000546842 WDR17Q8IZU2 1322 aa41.14■■■■■ 4.18
NR4A1-207ENST00000546842 TTC21AQ8NDW8 1320 aa41.14■■■■■ 4.18
NR4A1-207ENST00000546842 RGPD5Q99666 1765 aa41.13■■■■■ 4.17
NR4A1-207ENST00000546842 C11orf95C9JLR9 678 aaPredicted RBP41.12■■■■■ 4.17
NR4A1-207ENST00000546842 SOX12O15370 315 aa41.12■■■■■ 4.17
NR4A1-207ENST00000546842 KCNH5Q8NCM2 988 aa41.12■■■■■ 4.17
NR4A1-207ENST00000546842 KTN1Q86UP2 1357 aaKnown RBP41.11■■■■■ 4.17
NR4A1-207ENST00000546842 SBF2Q86WG5 1849 aa41.1■■■■■ 4.17
NR4A1-207ENST00000546842 DDB1Q16531 1140 aa41.1■■■■■ 4.17
NR4A1-207ENST00000546842 NFAT5O94916 1531 aa41.09■■■■■ 4.17
NR4A1-207ENST00000546842 MON2Q7Z3U7 1717 aa41.08■■■■■ 4.17
NR4A1-207ENST00000546842 SBNO2Q9Y2G9 1366 aa41.08■■■■■ 4.17
NR4A1-207ENST00000546842 NBPF14Q5TI25 921 aa41.06■■■■■ 4.16
NR4A1-207ENST00000546842 CARD11Q9BXL7 1154 aa41.02■■■■■ 4.16
NR4A1-207ENST00000546842 CSB-PGBD3P0DP91 1061 aa41.01■■■■■ 4.16
NR4A1-207ENST00000546842 CDCA7Q9BWT1 371 aaPredicted RBP41.01■■■■■ 4.16
NR4A1-207ENST00000546842 RGPD3A6NKT7 1758 aaPredicted RBP41.01■■■■■ 4.16
NR4A1-207ENST00000546842 RGPD4Q7Z3J3 1758 aa41.01■■■■■ 4.16
NR4A1-207ENST00000546842 CARD10Q9BWT7 1032 aa41■■■■■ 4.15
NR4A1-207ENST00000546842 MARCH10Q8NA82 808 aaPredicted RBP40.99■■■■■ 4.15
NR4A1-207ENST00000546842 ABCC6O95255 1503 aa40.98■■■■■ 4.15
NR4A1-207ENST00000546842 CD163L1Q9NR16 1453 aa40.98■■■■■ 4.15
NR4A1-207ENST00000546842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP40.98■■■■■ 4.15
NR4A1-207ENST00000546842 PTF1AQ7RTS3 328 aa40.96■■■■■ 4.15
NR4A1-207ENST00000546842 USP54Q70EL1 1684 aa40.96■■■■■ 4.15
NR4A1-207ENST00000546842 BCL11BQ9C0K0 894 aaPredicted RBP40.95■■■■■ 4.15
NR4A1-207ENST00000546842 USP31Q70CQ4 1352 aa40.95■■■■■ 4.15
NR4A1-207ENST00000546842 PLSCR1O15162 318 aa40.94■■■■■ 4.14
NR4A1-207ENST00000546842 BCL9O00512 1426 aa40.93■■■■■ 4.14
NR4A1-207ENST00000546842 NME9Q86XW9 330 aa40.92■■■■■ 4.14
NR4A1-207ENST00000546842 CCDC7Q96M83 1385 aa40.9■■■■■ 4.14
NR4A1-207ENST00000546842 TMC1Q8TDI8 760 aa40.9■■■■■ 4.14
NR4A1-207ENST00000546842 TONSLQ96HA7 1378 aa40.89■■■■■ 4.14
NR4A1-207ENST00000546842 LTN1O94822 1766 aa40.86■■■■■ 4.13
NR4A1-207ENST00000546842 SLC12A5Q9H2X9 1139 aa40.86■■■■■ 4.13
NR4A1-207ENST00000546842 EXOC5O00471 708 aa40.85■■■■■ 4.13
NR4A1-207ENST00000546842 HDGFL2Q7Z4V5 671 aaPredicted RBP40.85■■■■■ 4.13
NR4A1-207ENST00000546842 ANO8Q9HCE9 1232 aaPredicted RBP40.85■■■■■ 4.13
NR4A1-207ENST00000546842 TNS2Q63HR2 1409 aa40.84■■■■■ 4.13
NR4A1-207ENST00000546842 EDC4Q6P2E9 1401 aaKnown RBP40.84■■■■■ 4.13
NR4A1-207ENST00000546842 ERBB3P21860 1342 aa40.83■■■■■ 4.13
NR4A1-207ENST00000546842 SPON1Q9HCB6 807 aa40.82■■■■■ 4.13
NR4A1-207ENST00000546842 A0A1W2PP64 1363 aa40.8■■■■■ 4.12
NR4A1-207ENST00000546842 KCNQ2O43526 872 aa40.8■■■■■ 4.12
NR4A1-207ENST00000546842 PROM2Q8N271 834 aa40.8■■■■■ 4.12
NR4A1-207ENST00000546842 NLRP2Q9NX02 1062 aa40.78■■■■■ 4.12
NR4A1-207ENST00000546842 TERF2IPQ9NYB0 399 aa40.77■■■■■ 4.12
NR4A1-207ENST00000546842 CASZ1Q86V15 1759 aa40.76■■■■■ 4.12
NR4A1-207ENST00000546842 PUS7Q96PZ0 661 aaKnown RBP40.75■■■■■ 4.11
NR4A1-207ENST00000546842 PPP1R1BQ9UD71 204 aaPredicted RBP40.74■■■■■ 4.11
NR4A1-207ENST00000546842 ANKRD24Q8TF21 1146 aa40.72■■■■■ 4.11
NR4A1-207ENST00000546842 NHSQ6T4R5 1651 aa40.72■■■■■ 4.11
NR4A1-207ENST00000546842 TXNRD1Q16881 649 aa40.7■■■■■ 4.11
NR4A1-207ENST00000546842 IL2RBP14784 551 aa40.69■■■■■ 4.1
NR4A1-207ENST00000546842 TESK2Q96S53 571 aa40.69■■■■■ 4.1
NR4A1-207ENST00000546842 PDGFDQ9GZP0 370 aaPredicted RBP40.68■■■■■ 4.1
NR4A1-207ENST00000546842 ST20-MTHFSA0A0A6YYL1 179 aa40.65■■■■■ 4.1
NR4A1-207ENST00000546842 ACSBG1Q96GR2 724 aa40.65■■■■■ 4.1
NR4A1-207ENST00000546842 NINLQ9Y2I6 1382 aa40.64■■■■■ 4.1
NR4A1-207ENST00000546842 STK32BQ9NY57 414 aa40.62■■■■■ 4.09
NR4A1-207ENST00000546842 KAT6BQ8WYB5 2073 aa40.6■■■■■ 4.09
NR4A1-207ENST00000546842 IP6K1Q92551 441 aa40.6■■■■■ 4.09
NR4A1-207ENST00000546842 ZBTB7AO95365 584 aa40.59■■■■■ 4.09
NR4A1-207ENST00000546842 SLC15A2Q16348 729 aa40.58■■■■■ 4.09
NR4A1-207ENST00000546842 BTAF1O14981 1849 aa40.58■■■■■ 4.09
NR4A1-207ENST00000546842 FAM208AQ9UK61 1670 aaKnown RBP40.57■■■■■ 4.09
NR4A1-207ENST00000546842 LTV1Q96GA3 475 aaPredicted RBP40.54■■■■■ 4.08
NR4A1-207ENST00000546842 COG3Q96JB2 828 aa40.54■■■■■ 4.08
NR4A1-207ENST00000546842 MYOM1P52179 1685 aa40.53■■■■■ 4.08
NR4A1-207ENST00000546842 MAP3K19Q56UN5 1328 aa40.51■■■■■ 4.08
NR4A1-207ENST00000546842 PTGER2P43116 358 aa40.51■■■■■ 4.08
NR4A1-207ENST00000546842 ATF5Q9Y2D1 282 aaPredicted RBP40.51■■■■■ 4.08
NR4A1-207ENST00000546842 PAPPAQ13219 1627 aa40.51■■■■■ 4.08
NR4A1-207ENST00000546842 SLC24A1O60721 1099 aa40.5■■■■■ 4.07
NR4A1-207ENST00000546842 ANKRD36BQ8N2N9 1353 aa40.49■■■■■ 4.07
NR4A1-207ENST00000546842 FBLN1P23142 703 aa40.48■■■■■ 4.07
NR4A1-207ENST00000546842 YY1P25490 414 aa40.47■■■■■ 4.07
NR4A1-207ENST00000546842 HOXC9P31274 260 aa40.47■■■■■ 4.07
NR4A1-207ENST00000546842 DDX54Q8TDD1 881 aaKnown RBP40.45■■■■■ 4.07
NR4A1-207ENST00000546842 DCAF8L1A6NGE4 600 aa40.44■■■■■ 4.06
NR4A1-207ENST00000546842 AMPHP49418 695 aa40.44■■■■■ 4.06
NR4A1-207ENST00000546842 RGPD2P0DJD1 1756 aa40.43■■■■■ 4.06
NR4A1-207ENST00000546842 MTFR1LQ9H019 292 aa40.42■■■■■ 4.06
NR4A1-207ENST00000546842 USP47Q96K76 1375 aa40.42■■■■■ 4.06
NR4A1-207ENST00000546842 LRRC4BQ9NT99 713 aa40.4■■■■■ 4.06
NR4A1-207ENST00000546842 TMF1P82094 1093 aa40.38■■■■■ 4.05
NR4A1-207ENST00000546842 ZNF827Q17R98 1081 aa40.38■■■■■ 4.05
NR4A1-207ENST00000546842 RTL1A6NKG5 1358 aa40.37■■■■■ 4.05
NR4A1-207ENST00000546842 SGIP1Q9BQI5 828 aa40.37■■■■■ 4.05
NR4A1-207ENST00000546842 SHANK3Q9BYB0 1731 aa40.36■■■■■ 4.05
NR4A1-207ENST00000546842 FYB1O15117 783 aa40.35■■■■■ 4.05
NR4A1-207ENST00000546842 TRIM26Q12899 539 aaPredicted RBP40.35■■■■■ 4.05
NR4A1-207ENST00000546842 RRS1Q15050 365 aaKnown RBP40.35■■■■■ 4.05
NR4A1-207ENST00000546842 MEGF6O75095 1541 aa40.35■■■■■ 4.05
NR4A1-207ENST00000546842 DOT1LQ8TEK3 1739 aa40.34■■■■■ 4.05
NR4A1-207ENST00000546842 GGNBP2Q9H3C7 697 aa40.34■■■■■ 4.05
NR4A1-207ENST00000546842 FHDC1Q9C0D6 1143 aaPredicted RBP40.33■■■■■ 4.05
NR4A1-207ENST00000546842 ZCRB1Q8TBF4 217 aaKnown RBP40.3■■■■■ 4.04
NR4A1-207ENST00000546842 PRIM1P49642 420 aaKnown RBP40.29■■■■■ 4.04
NR4A1-207ENST00000546842 SLC27A3Q5K4L6 730 aa40.29■■■■■ 4.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms