RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 VPS37DQ86XT2 251 aa12.61□□□□□ -0.39
SSH1-203ENST00000546433 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
SSH1-203ENST00000546433 MYO5CQ9NQX4 1742 aa12.61□□□□□ -0.39
SSH1-203ENST00000546433 CPLX1O14810 134 aa12.6□□□□□ -0.39
SSH1-203ENST00000546433 MCTP1Q6DN14 999 aa12.6□□□□□ -0.39
SSH1-203ENST00000546433 CCDC70Q6NSX1 233 aa12.6□□□□□ -0.39
SSH1-203ENST00000546433 ANKRD20A12PQ8NF67 263 aa12.6□□□□□ -0.39
SSH1-203ENST00000546433 SLAIN2Q9P270 581 aa12.6□□□□□ -0.39
SSH1-203ENST00000546433 NLRP1Q9C000 1473 aa12.6□□□□□ -0.39
SSH1-203ENST00000546433 VPS53Q5VIR6 699 aa12.6□□□□□ -0.39
SSH1-203ENST00000546433 TRPC5Q9UL62 973 aaPredicted RBP12.6□□□□□ -0.39
SSH1-203ENST00000546433 SHANK2Q9UPX8 1470 aa12.6□□□□□ -0.39
SSH1-203ENST00000546433 NINLQ9Y2I6 1382 aa12.59□□□□□ -0.39
SSH1-203ENST00000546433 SMARCC1Q92922 1105 aaPredicted RBP12.59□□□□□ -0.39
SSH1-203ENST00000546433 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
SSH1-203ENST00000546433 CDC45O75419 566 aa12.59□□□□□ -0.39
SSH1-203ENST00000546433 GPS2Q13227 327 aa12.59□□□□□ -0.39
SSH1-203ENST00000546433 A0A087WZG4 1122 aa12.58□□□□□ -0.39
SSH1-203ENST00000546433 PES1O00541 588 aaKnown RBP12.58□□□□□ -0.39
SSH1-203ENST00000546433 TNNT3P45378 269 aaPredicted RBP12.58□□□□□ -0.4
SSH1-203ENST00000546433 STARD3NLO95772 234 aa12.58□□□□□ -0.4
SSH1-203ENST00000546433 SMC3Q9UQE7 1217 aa12.58□□□□□ -0.4
SSH1-203ENST00000546433 YEATS2Q9ULM3 1422 aa12.58□□□□□ -0.4
SSH1-203ENST00000546433 SLC4A3P48751 1232 aa12.58□□□□□ -0.4
SSH1-203ENST00000546433 NOS1P29475 1434 aa12.57□□□□□ -0.4
SSH1-203ENST00000546433 C22orf23Q9BZE7 217 aa12.57□□□□□ -0.4
SSH1-203ENST00000546433 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.57□□□□□ -0.4
SSH1-203ENST00000546433 HECW2Q9P2P5 1572 aa12.57□□□□□ -0.4
SSH1-203ENST00000546433 ERICH2A1L162 156 aa12.57□□□□□ -0.4
SSH1-203ENST00000546433 WAPLQ7Z5K2 1190 aa12.57□□□□□ -0.4
SSH1-203ENST00000546433 DDB1Q16531 1140 aa12.57□□□□□ -0.4
SSH1-203ENST00000546433 KDM5DQ9BY66 1539 aa12.57□□□□□ -0.4
SSH1-203ENST00000546433 CFAP43Q8NDM7 1665 aa12.56□□□□□ -0.4
SSH1-203ENST00000546433 IPO7O95373 1038 aaKnown RBP12.56□□□□□ -0.4
SSH1-203ENST00000546433 BICD2Q8TD16 824 aa12.56□□□□□ -0.4
SSH1-203ENST00000546433 TRPM2O94759 1503 aa12.56□□□□□ -0.4
SSH1-203ENST00000546433 MTHFSP49914 203 aa12.56□□□□□ -0.4
SSH1-203ENST00000546433 ZNF530Q6P9A1 599 aaPredicted RBP12.56□□□□□ -0.4
SSH1-203ENST00000546433 APPP05067 770 aa12.55□□□□□ -0.4
SSH1-203ENST00000546433 GNAI3P08754 354 aa12.55□□□□□ -0.4
SSH1-203ENST00000546433 GGNBP2Q9H3C7 697 aa12.55□□□□□ -0.4
SSH1-203ENST00000546433 UBTFL1P0CB47 393 aaPredicted RBP12.55□□□□□ -0.4
SSH1-203ENST00000546433 AMOTQ4VCS5 1084 aa12.55□□□□□ -0.4
SSH1-203ENST00000546433 FBXO41Q8TF61 875 aa12.55□□□□□ -0.4
SSH1-203ENST00000546433 ARID3AQ99856 593 aa12.55□□□□□ -0.4
SSH1-203ENST00000546433 TTC21AQ8NDW8 1320 aa12.55□□□□□ -0.4
SSH1-203ENST00000546433 PSMA5P28066 241 aa12.54□□□□□ -0.4
SSH1-203ENST00000546433 HSP90AA2PQ14568 343 aaPredicted RBP12.54□□□□□ -0.4
SSH1-203ENST00000546433 SAFBQ15424 915 aaKnown RBP eCLIP12.54□□□□□ -0.4
SSH1-203ENST00000546433 NCBP3Q53F19 620 aaKnown RBP12.54□□□□□ -0.4
SSH1-203ENST00000546433 CCDC30Q5VVM6 783 aa12.54□□□□□ -0.4
SSH1-203ENST00000546433 LNPKQ9C0E8 428 aa12.54□□□□□ -0.4
SSH1-203ENST00000546433 CT47B1P0C2W7 299 aaPredicted RBP12.53□□□□□ -0.4
SSH1-203ENST00000546433 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 TMEM2Q9UHN6 1383 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 UGGT1Q9NYU2 1555 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 HMOX1P09601 288 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 SASS6Q6UVJ0 657 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 NFXL1Q6ZNB6 911 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.53□□□□□ -0.4
SSH1-203ENST00000546433 MLH3Q9UHC1 1453 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 PPP2R1AP30153 589 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 CCDC73Q6ZRK6 1079 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 CNTROBQ8N137 903 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 NECTIN2Q92692 538 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 ADAMTS8Q9UP79 889 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 PDE3AQ14432 1141 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 TCEAL9Q9UHQ7 104 aa12.53□□□□□ -0.4
SSH1-203ENST00000546433 HIP1O00291 1037 aa12.52□□□□□ -0.4
SSH1-203ENST00000546433 MCM2P49736 904 aa12.52□□□□□ -0.41
SSH1-203ENST00000546433 FOXD4L6Q3SYB3 417 aaPredicted RBP12.52□□□□□ -0.41
SSH1-203ENST00000546433 FOXD4L3Q6VB84 417 aaPredicted RBP12.52□□□□□ -0.41
SSH1-203ENST00000546433 PAXIP1Q6ZW49 1069 aaPredicted RBP12.52□□□□□ -0.41
SSH1-203ENST00000546433 RALYLQ86SE5 291 aaKnown RBP12.52□□□□□ -0.41
SSH1-203ENST00000546433 QTRT2Q9H974 415 aaKnown RBP12.52□□□□□ -0.41
SSH1-203ENST00000546433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.52□□□□□ -0.41
SSH1-203ENST00000546433 VPS37CA5D8V6 355 aaPredicted RBP12.52□□□□□ -0.41
SSH1-203ENST00000546433 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.52□□□□□ -0.41
SSH1-203ENST00000546433 TCP11L2Q8N4U5 519 aa12.51□□□□□ -0.41
SSH1-203ENST00000546433 PANK1Q8TE04 598 aa12.51□□□□□ -0.41
SSH1-203ENST00000546433 GCC1Q96CN9 775 aa12.51□□□□□ -0.41
SSH1-203ENST00000546433 TEX13AQ9BXU3 409 aaPredicted RBP12.51□□□□□ -0.41
SSH1-203ENST00000546433 C14orf93Q9H972 538 aaKnown RBP12.51□□□□□ -0.41
SSH1-203ENST00000546433 SCAF11Q99590 1463 aaKnown RBP12.51□□□□□ -0.41
SSH1-203ENST00000546433 LETM1O95202 739 aaPredicted RBP12.51□□□□□ -0.41
SSH1-203ENST00000546433 SAMD9Q5K651 1589 aa12.51□□□□□ -0.41
SSH1-203ENST00000546433 CCAR1Q8IX12 1150 aaKnown RBP12.51□□□□□ -0.41
SSH1-203ENST00000546433 ERC1Q8IUD2 1116 aa12.5□□□□□ -0.41
SSH1-203ENST00000546433 NPATQ14207 1427 aa12.5□□□□□ -0.41
SSH1-203ENST00000546433 SETQ01105 290 aaPredicted RBP12.5□□□□□ -0.41
SSH1-203ENST00000546433 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
SSH1-203ENST00000546433 NAT10Q9H0A0 1025 aaKnown RBP12.5□□□□□ -0.41
SSH1-203ENST00000546433 BRMS1Q9HCU9 246 aa12.5□□□□□ -0.41
SSH1-203ENST00000546433 RFC4P35249 363 aa12.49□□□□□ -0.41
SSH1-203ENST00000546433 CCAR2Q8N163 923 aaKnown RBP12.49□□□□□ -0.41
SSH1-203ENST00000546433 CLASRPQ8N2M8 674 aaKnown RBP12.49□□□□□ -0.41
SSH1-203ENST00000546433 XBP1P17861 261 aa12.49□□□□□ -0.41
SSH1-203ENST00000546433 ST5P78524 1137 aa12.49□□□□□ -0.41
SSH1-203ENST00000546433 DHX16O60231 1041 aaKnown RBP12.48□□□□□ -0.41
SSH1-203ENST00000546433 MRE11P49959 708 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms