RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 SF3B2Q13435 895 aaKnown RBP14.04□□□□□ -0.16
GABRB3-205ENST00000545868 NUTM2GQ5VZR2 741 aa14.04□□□□□ -0.16
GABRB3-205ENST00000545868 PRDM11Q9NQV5 511 aa14.04□□□□□ -0.16
GABRB3-205ENST00000545868 CIZ1Q9ULV3 898 aaPredicted RBP14.04□□□□□ -0.16
GABRB3-205ENST00000545868 ACEP12821 1306 aa14.04□□□□□ -0.16
GABRB3-205ENST00000545868 SPATA31A1Q5TZJ5 1347 aa14.04□□□□□ -0.16
GABRB3-205ENST00000545868 PEAK1Q9H792 1746 aa14.04□□□□□ -0.16
GABRB3-205ENST00000545868 SSH2Q76I76 1423 aa14.03□□□□□ -0.16
GABRB3-205ENST00000545868 LRRC37A3O60309 1634 aa14.02□□□□□ -0.16
GABRB3-205ENST00000545868 USP19O94966 1318 aa14.02□□□□□ -0.17
GABRB3-205ENST00000545868 PSDA5PKW4 1024 aaPredicted RBP14.02□□□□□ -0.17
GABRB3-205ENST00000545868 RGL2O15211 777 aa14.02□□□□□ -0.17
GABRB3-205ENST00000545868 MNX1P50219 401 aaPredicted RBP14.02□□□□□ -0.17
GABRB3-205ENST00000545868 NUBP1P53384 320 aa14.02□□□□□ -0.17
GABRB3-205ENST00000545868 ZC3H6P61129 1189 aaKnown RBP14.02□□□□□ -0.17
GABRB3-205ENST00000545868 EN1Q05925 392 aaPredicted RBP14.02□□□□□ -0.17
GABRB3-205ENST00000545868 NBPF8Q3BBV2 869 aa14.02□□□□□ -0.17
GABRB3-205ENST00000545868 PPIP5K1Q6PFW1 1433 aa14.01□□□□□ -0.17
GABRB3-205ENST00000545868 PLEKHG3A1L390 1219 aa14.01□□□□□ -0.17
GABRB3-205ENST00000545868 BAG6P46379 1132 aa14.01□□□□□ -0.17
GABRB3-205ENST00000545868 SLIT3O75094 1523 aa14□□□□□ -0.17
GABRB3-205ENST00000545868 STRN4Q9NRL3 753 aa14□□□□□ -0.17
GABRB3-205ENST00000545868 CCDC61Q9Y6R9 512 aa14□□□□□ -0.17
GABRB3-205ENST00000545868 RGPD3A6NKT7 1758 aaPredicted RBP14□□□□□ -0.17
GABRB3-205ENST00000545868 RGPD4Q7Z3J3 1758 aa14□□□□□ -0.17
GABRB3-205ENST00000545868 MON2Q7Z3U7 1717 aa14□□□□□ -0.17
GABRB3-205ENST00000545868 CPDO75976 1380 aa13.99□□□□□ -0.17
GABRB3-205ENST00000545868 COL5A2P05997 1499 aaPredicted RBP13.99□□□□□ -0.17
GABRB3-205ENST00000545868 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
GABRB3-205ENST00000545868 CENPJQ9HC77 1338 aaPredicted RBP13.97□□□□□ -0.17
GABRB3-205ENST00000545868 EZH2Q15910 746 aaKnown RBP13.97□□□□□ -0.17
GABRB3-205ENST00000545868 CABP2Q9NPB3 220 aa13.97□□□□□ -0.17
GABRB3-205ENST00000545868 USP6P35125 1406 aa13.97□□□□□ -0.17
GABRB3-205ENST00000545868 LTN1O94822 1766 aa13.96□□□□□ -0.17
GABRB3-205ENST00000545868 USP54Q70EL1 1684 aa13.96□□□□□ -0.17
GABRB3-205ENST00000545868 LARP1Q6PKG0 1096 aaKnown RBP13.96□□□□□ -0.17
GABRB3-205ENST00000545868 ABTB2Q8N961 1025 aa13.96□□□□□ -0.17
GABRB3-205ENST00000545868 USP35Q9P2H5 1018 aa13.96□□□□□ -0.17
GABRB3-205ENST00000545868 TRIM37O94972 964 aa13.95□□□□□ -0.18
GABRB3-205ENST00000545868 BARGINQ6ZT62 677 aa13.95□□□□□ -0.18
GABRB3-205ENST00000545868 CAMKK2Q96RR4 588 aa13.95□□□□□ -0.18
GABRB3-205ENST00000545868 SRPK2P78362 688 aaKnown RBP13.94□□□□□ -0.18
GABRB3-205ENST00000545868 R3HDM1Q15032 1099 aaKnown RBP13.94□□□□□ -0.18
GABRB3-205ENST00000545868 GCP02774 474 aa13.93□□□□□ -0.18
GABRB3-205ENST00000545868 GSE1Q14687 1217 aa13.93□□□□□ -0.18
GABRB3-205ENST00000545868 KAT6BQ8WYB5 2073 aa13.93□□□□□ -0.18
GABRB3-205ENST00000545868 CASZ1Q86V15 1759 aa13.93□□□□□ -0.18
GABRB3-205ENST00000545868 NFAT5O94916 1531 aa13.92□□□□□ -0.18
GABRB3-205ENST00000545868 FAM196AQ6ZSG2 479 aa13.92□□□□□ -0.18
GABRB3-205ENST00000545868 L3MBTL2Q969R5 705 aa13.92□□□□□ -0.18
GABRB3-205ENST00000545868 BRD4O60885 1362 aaPredicted RBP13.92□□□□□ -0.18
GABRB3-205ENST00000545868 CRB1P82279 1406 aa13.91□□□□□ -0.18
GABRB3-205ENST00000545868 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
GABRB3-205ENST00000545868 CABP1Q9NZU7 370 aa13.91□□□□□ -0.18
GABRB3-205ENST00000545868 EVA1CP58658 441 aa13.9□□□□□ -0.18
GABRB3-205ENST00000545868 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
GABRB3-205ENST00000545868 SIN3AQ96ST3 1273 aa13.9□□□□□ -0.18
GABRB3-205ENST00000545868 PARD3Q8TEW0 1356 aa13.9□□□□□ -0.18
GABRB3-205ENST00000545868 AATKQ6ZMQ8 1374 aa13.89□□□□□ -0.19
GABRB3-205ENST00000545868 APBA3O96018 575 aa13.89□□□□□ -0.19
GABRB3-205ENST00000545868 CPSF1Q10570 1443 aaKnown RBP13.89□□□□□ -0.19
GABRB3-205ENST00000545868 PDE3BQ13370 1112 aa13.87□□□□□ -0.19
GABRB3-205ENST00000545868 AXIN2Q9Y2T1 843 aa13.87□□□□□ -0.19
GABRB3-205ENST00000545868 THRAP3Q9Y2W1 955 aaKnown RBP13.87□□□□□ -0.19
GABRB3-205ENST00000545868 OVOS2A0A0G2JMS6 1433 aa13.87□□□□□ -0.19
GABRB3-205ENST00000545868 OVOS2A0A0J9YW53 1432 aa13.87□□□□□ -0.19
GABRB3-205ENST00000545868 OVOS2Q6IE36 1432 aa13.87□□□□□ -0.19
GABRB3-205ENST00000545868 RGPD2P0DJD1 1756 aa13.86□□□□□ -0.19
GABRB3-205ENST00000545868 NLRP6P59044 892 aa13.86□□□□□ -0.19
GABRB3-205ENST00000545868 DCAF8Q5TAQ9 597 aa13.86□□□□□ -0.19
GABRB3-205ENST00000545868 NHSQ6T4R5 1651 aa13.85□□□□□ -0.19
GABRB3-205ENST00000545868 ABCC6O95255 1503 aa13.85□□□□□ -0.19
GABRB3-205ENST00000545868 ZBTB7CA1YPR0 619 aa13.85□□□□□ -0.19
GABRB3-205ENST00000545868 BBXQ8WY36 941 aaPredicted RBP13.85□□□□□ -0.19
GABRB3-205ENST00000545868 CD163L1Q9NR16 1453 aa13.85□□□□□ -0.19
GABRB3-205ENST00000545868 EVC2Q86UK5 1308 aa13.85□□□□□ -0.19
GABRB3-205ENST00000545868 BTAF1O14981 1849 aa13.85□□□□□ -0.19
GABRB3-205ENST00000545868 ROCK2O75116 1388 aaKnown RBP13.84□□□□□ -0.19
GABRB3-205ENST00000545868 PTF1AQ7RTS3 328 aa13.84□□□□□ -0.19
GABRB3-205ENST00000545868 RASEFQ8IZ41 740 aa13.84□□□□□ -0.19
GABRB3-205ENST00000545868 FAM212AQ96EL1 285 aa13.84□□□□□ -0.19
GABRB3-205ENST00000545868 TTC21BQ7Z4L5 1316 aa13.84□□□□□ -0.19
GABRB3-205ENST00000545868 WDR17Q8IZU2 1322 aa13.83□□□□□ -0.2
GABRB3-205ENST00000545868 MYOM1P52179 1685 aa13.82□□□□□ -0.2
GABRB3-205ENST00000545868 SHANK3Q9BYB0 1731 aa13.82□□□□□ -0.2
GABRB3-205ENST00000545868 ARHGEF25Q86VW2 580 aa13.82□□□□□ -0.2
GABRB3-205ENST00000545868 RNF25Q96BH1 459 aaPredicted RBP13.82□□□□□ -0.2
GABRB3-205ENST00000545868 TUBGCP6Q96RT7 1819 aa13.82□□□□□ -0.2
GABRB3-205ENST00000545868 NEUROD1Q13562 356 aa13.81□□□□□ -0.2
GABRB3-205ENST00000545868 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
GABRB3-205ENST00000545868 SBNO2Q9Y2G9 1366 aa13.81□□□□□ -0.2
GABRB3-205ENST00000545868 BCL9O00512 1426 aa13.81□□□□□ -0.2
GABRB3-205ENST00000545868 PAPPAQ13219 1627 aa13.8□□□□□ -0.2
GABRB3-205ENST00000545868 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
GABRB3-205ENST00000545868 TOM1L2Q6ZVM7 507 aa13.8□□□□□ -0.2
GABRB3-205ENST00000545868 MARCH10Q8NA82 808 aaPredicted RBP13.8□□□□□ -0.2
GABRB3-205ENST00000545868 ANO8Q9HCE9 1232 aaPredicted RBP13.8□□□□□ -0.2
GABRB3-205ENST00000545868 UTRNP46939 3433 aa13.8□□□□□ -0.2
GABRB3-205ENST00000545868 KTN1Q86UP2 1357 aaKnown RBP13.8□□□□□ -0.2
GABRB3-205ENST00000545868 SOX12O15370 315 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms