RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
PRPF40A-212ENST00000545856 KIAA0232Q92628 1395 aa21.42■■□□□ 1.02
PRPF40A-212ENST00000545856 PLEKHG2Q9H7P9 1386 aa21.41■■□□□ 1.02
PRPF40A-212ENST00000545856 RGPD5Q99666 1765 aa21.41■■□□□ 1.02
PRPF40A-212ENST00000545856 HSPA1LP34931 641 aa21.4■■□□□ 1.02
PRPF40A-212ENST00000545856 SOX12O15370 315 aa21.39■■□□□ 1.02
PRPF40A-212ENST00000545856 WDR43Q15061 677 aaKnown RBP eCLIP21.39■■□□□ 1.02
PRPF40A-212ENST00000545856 CABLES1Q8TDN4 633 aa21.39■■□□□ 1.02
PRPF40A-212ENST00000545856 PRDM11Q9NQV5 511 aa21.39■■□□□ 1.02
PRPF40A-212ENST00000545856 PLCH1Q4KWH8 1693 aa21.39■■□□□ 1.01
PRPF40A-212ENST00000545856 PPM1GO15355 546 aaPredicted RBP21.38■■□□□ 1.01
PRPF40A-212ENST00000545856 PNNQ9H307 717 aaKnown RBP21.38■■□□□ 1.01
PRPF40A-212ENST00000545856 IL13P35225 146 aa21.36■■□□□ 1.01
PRPF40A-212ENST00000545856 ZC3H6P61129 1189 aaKnown RBP21.36■■□□□ 1.01
PRPF40A-212ENST00000545856 NCAPD2Q15021 1401 aa21.36■■□□□ 1.01
PRPF40A-212ENST00000545856 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.36■■□□□ 1.01
PRPF40A-212ENST00000545856 FBLN1P23142 703 aa21.36■■□□□ 1.01
PRPF40A-212ENST00000545856 CCDC184Q52MB2 194 aa21.36■■□□□ 1.01
PRPF40A-212ENST00000545856 HSP90AB2PQ58FF8 381 aa21.36■■□□□ 1.01
PRPF40A-212ENST00000545856 ERBB3P21860 1342 aa21.35■■□□□ 1.01
PRPF40A-212ENST00000545856 KDRP35968 1356 aa21.34■■□□□ 1.01
PRPF40A-212ENST00000545856 COL5A2P05997 1499 aaPredicted RBP21.34■■□□□ 1.01
PRPF40A-212ENST00000545856 EIF4A2Q14240 407 aaKnown RBP21.34■■□□□ 1.01
PRPF40A-212ENST00000545856 NRAPQ86VF7 1730 aa21.34■■□□□ 1.01
PRPF40A-212ENST00000545856 IGSF1Q8N6C5 1336 aa21.33■■□□□ 1
PRPF40A-212ENST00000545856 SLIT2O94813 1529 aa21.31■■□□□ 1
PRPF40A-212ENST00000545856 FCHSD2O94868 740 aa21.31■■□□□ 1
PRPF40A-212ENST00000545856 NGEFQ8N5V2 710 aa21.3■■□□□ 1
PRPF40A-212ENST00000545856 WDR17Q8IZU2 1322 aa21.3■■□□□ 1
PRPF40A-212ENST00000545856 ANKRD24Q8TF21 1146 aa21.29■■□□□ 1
PRPF40A-212ENST00000545856 LRP6O75581 1613 aa21.29■■□□□ 1
PRPF40A-212ENST00000545856 RGPD2P0DJD1 1756 aa21.29■■□□□ 1
PRPF40A-212ENST00000545856 FAM83GA6ND36 823 aa21.28■■□□□ 1
PRPF40A-212ENST00000545856 U2AF1L5P0DN76 240 aaPredicted RBP21.28■■□□□ 1
PRPF40A-212ENST00000545856 U2AF1Q01081 240 aaKnown RBP eCLIP21.28■■□□□ 1
PRPF40A-212ENST00000545856 NCBP3Q53F19 620 aaKnown RBP21.28■■□□□ 1
PRPF40A-212ENST00000545856 AXIN2Q9Y2T1 843 aa21.28■■□□□ 1
PRPF40A-212ENST00000545856 U2SURPO15042 1029 aaKnown RBP21.27■■□□□ 1
PRPF40A-212ENST00000545856 ADAMTS8Q9UP79 889 aa21.27■■□□□ 1
PRPF40A-212ENST00000545856 ZBTB7CA1YPR0 619 aa21.26■□□□□ 0.99
PRPF40A-212ENST00000545856 NEFMP07197 916 aa21.26■□□□□ 0.99
PRPF40A-212ENST00000545856 FAM9BQ8IZU0 186 aa21.26■□□□□ 0.99
PRPF40A-212ENST00000545856 CRB1P82279 1406 aa21.26■□□□□ 0.99
PRPF40A-212ENST00000545856 PARP4Q9UKK3 1724 aaKnown RBP21.25■□□□□ 0.99
PRPF40A-212ENST00000545856 PLEKHG5O94827 1062 aa21.25■□□□□ 0.99
PRPF40A-212ENST00000545856 CHRNA2Q15822 529 aa21.25■□□□□ 0.99
PRPF40A-212ENST00000545856 EYA1Q99502 592 aa21.24■□□□□ 0.99
PRPF40A-212ENST00000545856 WNK3Q9BYP7 1800 aa21.24■□□□□ 0.99
PRPF40A-212ENST00000545856 FNBP4Q8N3X1 1017 aaPredicted RBP21.23■□□□□ 0.99
PRPF40A-212ENST00000545856 BTG4Q9NY30 223 aa21.23■□□□□ 0.99
PRPF40A-212ENST00000545856 NUTM2BA6NNL0 878 aaPredicted RBP21.23■□□□□ 0.99
PRPF40A-212ENST00000545856 NUTM2EB1AL46 878 aaPredicted RBP21.23■□□□□ 0.99
PRPF40A-212ENST00000545856 ADAMTS2O95450 1211 aa21.23■□□□□ 0.99
PRPF40A-212ENST00000545856 NUTM2AQ8IVF1 878 aaPredicted RBP21.23■□□□□ 0.99
PRPF40A-212ENST00000545856 RUNDC1Q96C34 613 aa21.23■□□□□ 0.99
PRPF40A-212ENST00000545856 CARD10Q9BWT7 1032 aa21.23■□□□□ 0.99
PRPF40A-212ENST00000545856 RSPH6AQ9H0K4 717 aa21.23■□□□□ 0.99
PRPF40A-212ENST00000545856 CSB-PGBD3P0DP91 1061 aa21.22■□□□□ 0.99
PRPF40A-212ENST00000545856 MAPK8IP3Q9UPT6 1336 aa21.21■□□□□ 0.99
PRPF40A-212ENST00000545856 EVA1CP58658 441 aa21.21■□□□□ 0.99
PRPF40A-212ENST00000545856 NBPF6Q5VWK0 638 aa21.2■□□□□ 0.98
PRPF40A-212ENST00000545856 SULT6B1Q6IMI4 303 aa21.2■□□□□ 0.98
PRPF40A-212ENST00000545856 LTV1Q96GA3 475 aaPredicted RBP21.2■□□□□ 0.98
PRPF40A-212ENST00000545856 NBPF4Q96M43 638 aa21.2■□□□□ 0.98
PRPF40A-212ENST00000545856 PKD1L3Q7Z443 1732 aa21.19■□□□□ 0.98
PRPF40A-212ENST00000545856 MEX3CQ5U5Q3 659 aaKnown RBP21.19■□□□□ 0.98
PRPF40A-212ENST00000545856 PLEKHF1Q96S99 279 aa21.19■□□□□ 0.98
PRPF40A-212ENST00000545856 THRAP3Q9Y2W1 955 aaKnown RBP21.19■□□□□ 0.98
PRPF40A-212ENST00000545856 UNC5CLQ8IV45 518 aa21.18■□□□□ 0.98
PRPF40A-212ENST00000545856 NGLY1Q96IV0 654 aa21.18■□□□□ 0.98
PRPF40A-212ENST00000545856 NLRP2Q9NX02 1062 aa21.18■□□□□ 0.98
PRPF40A-212ENST00000545856 BCL9LQ86UU0 1499 aa21.18■□□□□ 0.98
PRPF40A-212ENST00000545856 TOM1L2Q6ZVM7 507 aa21.17■□□□□ 0.98
PRPF40A-212ENST00000545856 CDCA7Q9BWT1 371 aaPredicted RBP21.17■□□□□ 0.98
PRPF40A-212ENST00000545856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.17■□□□□ 0.981e-8■■■■□ 25.3
PRPF40A-212ENST00000545856 PRKAR2BP31323 418 aa21.16■□□□□ 0.98
PRPF40A-212ENST00000545856 C8orf37Q96NL8 207 aa21.16■□□□□ 0.98
PRPF40A-212ENST00000545856 DLG5Q8TDM6 1919 aa21.15■□□□□ 0.98
PRPF40A-212ENST00000545856 AMOTQ4VCS5 1084 aa21.15■□□□□ 0.98
PRPF40A-212ENST00000545856 HMOX1P09601 288 aa21.14■□□□□ 0.98
PRPF40A-212ENST00000545856 VPS72Q15906 364 aa21.14■□□□□ 0.98
PRPF40A-212ENST00000545856 GAS2L2Q8NHY3 880 aa21.14■□□□□ 0.98
PRPF40A-212ENST00000545856 RAPGEF4Q8WZA2 1011 aa21.14■□□□□ 0.98
PRPF40A-212ENST00000545856 CCDC27Q2M243 656 aa21.13■□□□□ 0.97
PRPF40A-212ENST00000545856 STRN4Q9NRL3 753 aa21.13■□□□□ 0.97
PRPF40A-212ENST00000545856 OVOS2A0A0G2JMS6 1433 aa21.13■□□□□ 0.97
PRPF40A-212ENST00000545856 LARP1Q6PKG0 1096 aaKnown RBP21.12■□□□□ 0.97
PRPF40A-212ENST00000545856 AEBP1Q8IUX7 1158 aa21.12■□□□□ 0.97
PRPF40A-212ENST00000545856 SPATA31A5Q5VU36 1347 aa21.12■□□□□ 0.97
PRPF40A-212ENST00000545856 ZBED9Q6R2W3 1325 aa21.12■□□□□ 0.97
PRPF40A-212ENST00000545856 SPATA31A7Q8IWB4 1347 aa21.12■□□□□ 0.97
PRPF40A-212ENST00000545856 DISP2A7MBM2 1401 aa21.12■□□□□ 0.97
PRPF40A-212ENST00000545856 TATP17735 454 aaPredicted RBP21.11■□□□□ 0.97
PRPF40A-212ENST00000545856 LMOD3Q0VAK6 560 aa21.11■□□□□ 0.97
PRPF40A-212ENST00000545856 USP21Q9UK80 565 aa21.11■□□□□ 0.97
PRPF40A-212ENST00000545856 SPATA31A1Q5TZJ5 1347 aa21.11■□□□□ 0.97
PRPF40A-212ENST00000545856 ATRNO75882 1429 aa21.11■□□□□ 0.97
PRPF40A-212ENST00000545856 PLEKHO1Q53GL0 409 aaPredicted RBP21.1■□□□□ 0.97
PRPF40A-212ENST00000545856 TCP11L2Q8N4U5 519 aa21.1■□□□□ 0.97
PRPF40A-212ENST00000545856 IL2RBP14784 551 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms