RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 CLTCL1P53675 1640 aa9.75□□□□□ -0.85
LDHC-209ENST00000545848 PLA2R1Q13018 1463 aa9.75□□□□□ -0.85
LDHC-209ENST00000545848 A0A0G2JS52 829 aa9.75□□□□□ -0.85
LDHC-209ENST00000545848 ITGAEP38570 1179 aa9.75□□□□□ -0.85
LDHC-209ENST00000545848 HDGFP51858 240 aaKnown RBP9.75□□□□□ -0.85
LDHC-209ENST00000545848 RSPH4AQ5TD94 716 aa9.75□□□□□ -0.85
LDHC-209ENST00000545848 NOS1P29475 1434 aa9.74□□□□□ -0.85
LDHC-209ENST00000545848 NAIPQ13075 1403 aa9.74□□□□□ -0.85
LDHC-209ENST00000545848 ADGRB3O60242 1522 aa9.74□□□□□ -0.85
LDHC-209ENST00000545848 NUTM2FA1L443 756 aa9.74□□□□□ -0.85
LDHC-209ENST00000545848 RNF40O75150 1001 aa9.74□□□□□ -0.85
LDHC-209ENST00000545848 WASHC2CQ9Y4E1 1318 aa9.74□□□□□ -0.85
LDHC-209ENST00000545848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.74□□□□□ -0.85
LDHC-209ENST00000545848 KDM5AP29375 1690 aaKnown RBP9.74□□□□□ -0.85
LDHC-209ENST00000545848 ARHGAP31Q2M1Z3 1444 aa9.73□□□□□ -0.85
LDHC-209ENST00000545848 ARHGAP23Q9P227 1491 aa9.73□□□□□ -0.85
LDHC-209ENST00000545848 ROCK1Q13464 1354 aa9.73□□□□□ -0.85
LDHC-209ENST00000545848 NRXN3Q9Y4C0 1643 aa9.72□□□□□ -0.85
LDHC-209ENST00000545848 KCNC4Q03721 635 aa9.72□□□□□ -0.85
LDHC-209ENST00000545848 NLRP1Q9C000 1473 aa9.72□□□□□ -0.85
LDHC-209ENST00000545848 SLIT1O75093 1534 aa9.72□□□□□ -0.85
LDHC-209ENST00000545848 EYA1Q99502 592 aa9.71□□□□□ -0.86
LDHC-209ENST00000545848 ZNF335Q9H4Z2 1342 aaPredicted RBP9.71□□□□□ -0.86
LDHC-209ENST00000545848 PTPRTO14522 1441 aa9.71□□□□□ -0.86
LDHC-209ENST00000545848 TESPA1A2RU30 521 aaPredicted RBP9.7□□□□□ -0.86
LDHC-209ENST00000545848 SWT1Q5T5J6 900 aaKnown RBP9.7□□□□□ -0.86
LDHC-209ENST00000545848 SETD1AO15047 1707 aaKnown RBP9.7□□□□□ -0.86
LDHC-209ENST00000545848 RGS20O76081 388 aa9.69□□□□□ -0.86
LDHC-209ENST00000545848 ESF1Q9H501 851 aaKnown RBP9.69□□□□□ -0.86
LDHC-209ENST00000545848 MED14O60244 1454 aa9.68□□□□□ -0.86
LDHC-209ENST00000545848 FCHSD2O94868 740 aa9.68□□□□□ -0.86
LDHC-209ENST00000545848 SLF2Q8IX21 1173 aa9.68□□□□□ -0.86
LDHC-209ENST00000545848 KDM2AQ9Y2K7 1162 aa9.68□□□□□ -0.86
LDHC-209ENST00000545848 IFT172Q9UG01 1749 aa9.68□□□□□ -0.86
LDHC-209ENST00000545848 HFM1A2PYH4 1435 aa9.67□□□□□ -0.86
LDHC-209ENST00000545848 ZFYVE9O95405 1425 aa9.67□□□□□ -0.86
LDHC-209ENST00000545848 LTKP29376 864 aa9.67□□□□□ -0.86
LDHC-209ENST00000545848 ADGRG1Q9Y653 693 aa9.67□□□□□ -0.86
LDHC-209ENST00000545848 APLP1P51693 650 aa9.66□□□□□ -0.86
LDHC-209ENST00000545848 RBM26Q5T8P6 1007 aaKnown RBP9.66□□□□□ -0.86
LDHC-209ENST00000545848 SMYD5Q6GMV2 418 aa9.66□□□□□ -0.86
LDHC-209ENST00000545848 RBM46Q8TBY0 533 aaKnown RBP9.66□□□□□ -0.86
LDHC-209ENST00000545848 NECTIN2Q92692 538 aa9.66□□□□□ -0.86
LDHC-209ENST00000545848 SCAF11Q99590 1463 aaKnown RBP9.66□□□□□ -0.86
LDHC-209ENST00000545848 CHD2O14647 1828 aaKnown RBP9.66□□□□□ -0.86
LDHC-209ENST00000545848 NPHP4O75161 1426 aaPredicted RBP9.65□□□□□ -0.86
LDHC-209ENST00000545848 PPLO60437 1756 aa9.65□□□□□ -0.86
LDHC-209ENST00000545848 SLC4A3P48751 1232 aa9.65□□□□□ -0.86
LDHC-209ENST00000545848 IDI1Q13907 227 aa9.65□□□□□ -0.86
LDHC-209ENST00000545848 FAM161AQ3B820 660 aa9.65□□□□□ -0.86
LDHC-209ENST00000545848 TJAP1Q5JTD0 557 aa9.65□□□□□ -0.86
LDHC-209ENST00000545848 TRPM2O94759 1503 aa9.65□□□□□ -0.86
LDHC-209ENST00000545848 KIF1BO60333 1816 aa9.65□□□□□ -0.86
LDHC-209ENST00000545848 RPRD2Q5VT52 1461 aaKnown RBP9.65□□□□□ -0.87
LDHC-209ENST00000545848 NWD1Q149M9 1564 aa9.64□□□□□ -0.87
LDHC-209ENST00000545848 DNAJB2P25686 324 aa9.64□□□□□ -0.87
LDHC-209ENST00000545848 MTRQ99707 1265 aa9.64□□□□□ -0.87
LDHC-209ENST00000545848 NEXMIFQ5QGS0 1516 aa9.64□□□□□ -0.87
LDHC-209ENST00000545848 NUP155O75694 1391 aa9.63□□□□□ -0.87
LDHC-209ENST00000545848 LRRC7Q96NW7 1537 aa9.62□□□□□ -0.87
LDHC-209ENST00000545848 IL21Q9HBE4 155 aa9.62□□□□□ -0.87
LDHC-209ENST00000545848 XRN1Q8IZH2 1706 aaKnown RBP9.62□□□□□ -0.87
LDHC-209ENST00000545848 TMEM2Q9UHN6 1383 aa9.62□□□□□ -0.87
LDHC-209ENST00000545848 RCCD1A6NED2 376 aa9.61□□□□□ -0.87
LDHC-209ENST00000545848 HIC1Q14526 733 aa9.61□□□□□ -0.87
LDHC-209ENST00000545848 TMEM134Q9H6X4 195 aa9.61□□□□□ -0.87
LDHC-209ENST00000545848 KANK1Q14678 1352 aa9.61□□□□□ -0.87
LDHC-209ENST00000545848 ADAMTS13Q76LX8 1427 aa9.6□□□□□ -0.87
LDHC-209ENST00000545848 NUTM2DQ5VT03 806 aaPredicted RBP9.6□□□□□ -0.87
LDHC-209ENST00000545848 VSIG10Q8N0Z9 540 aa9.6□□□□□ -0.87
LDHC-209ENST00000545848 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
LDHC-209ENST00000545848 ASXL1Q8IXJ9 1541 aa9.59□□□□□ -0.87
LDHC-209ENST00000545848 NALCNQ8IZF0 1738 aa9.59□□□□□ -0.87
LDHC-209ENST00000545848 PTPRUQ92729 1446 aa9.58□□□□□ -0.88
LDHC-209ENST00000545848 RIMS2Q9UQ26 1411 aa9.58□□□□□ -0.88
LDHC-209ENST00000545848 GPR37O15354 613 aa9.57□□□□□ -0.88
LDHC-209ENST00000545848 OATP04181 439 aa9.57□□□□□ -0.88
LDHC-209ENST00000545848 COPS2P61201 443 aa9.57□□□□□ -0.88
LDHC-209ENST00000545848 PXYLP1Q8TE99 480 aa9.57□□□□□ -0.88
LDHC-209ENST00000545848 FBXO41Q8TF61 875 aa9.57□□□□□ -0.88
LDHC-209ENST00000545848 PRR14Q9BWN1 585 aa9.57□□□□□ -0.88
LDHC-209ENST00000545848 CPS1P31327 1500 aa9.56□□□□□ -0.88
LDHC-209ENST00000545848 SETBP1Q9Y6X0 1596 aa9.56□□□□□ -0.88
LDHC-209ENST00000545848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.56□□□□□ -0.88
LDHC-209ENST00000545848 GNPATO15228 680 aa9.56□□□□□ -0.88
LDHC-209ENST00000545848 FECHP22830 423 aa9.56□□□□□ -0.88
LDHC-209ENST00000545848 IQSEC2Q5JU85 1478 aa9.55□□□□□ -0.88
LDHC-209ENST00000545848 RAB3GAP2Q9H2M9 1393 aa9.55□□□□□ -0.88
LDHC-209ENST00000545848 METTL3Q86U44 580 aaKnown RBP9.55□□□□□ -0.88
LDHC-209ENST00000545848 IRX2Q9BZI1 471 aaPredicted RBP9.55□□□□□ -0.88
LDHC-209ENST00000545848 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.54□□□□□ -0.88
LDHC-209ENST00000545848 THEMISQ8N1K5 641 aaPredicted RBP9.54□□□□□ -0.88
LDHC-209ENST00000545848 SLC26A8Q96RN1 970 aa9.54□□□□□ -0.88
LDHC-209ENST00000545848 PCDHB3Q9Y5E6 796 aa9.54□□□□□ -0.88
LDHC-209ENST00000545848 ROBO1Q9Y6N7 1651 aa9.53□□□□□ -0.88
LDHC-209ENST00000545848 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
LDHC-209ENST00000545848 TXNDC2Q86VQ3 553 aa9.53□□□□□ -0.88
LDHC-209ENST00000545848 ANKLE2Q86XL3 938 aa9.53□□□□□ -0.88
LDHC-209ENST00000545848 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
LDHC-209ENST00000545848 NKX2-3Q8TAU0 364 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms