RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-223ENST00000545605 FBLN1P23142 703 aa15.38■□□□□ 0.05
SCNN1A-223ENST00000545605 NGEFQ8N5V2 710 aa15.38■□□□□ 0.05
SCNN1A-223ENST00000545605 DDX17Q92841 729 aaKnown RBP15.38■□□□□ 0.05
SCNN1A-223ENST00000545605 VIRMAQ69YN4 1812 aaKnown RBP15.38■□□□□ 0.05
SCNN1A-223ENST00000545605 PARP4Q9UKK3 1724 aaKnown RBP15.37■□□□□ 0.05
SCNN1A-223ENST00000545605 PPM1GO15355 546 aaPredicted RBP15.37■□□□□ 0.05
SCNN1A-223ENST00000545605 IL13P35225 146 aa15.37■□□□□ 0.05
SCNN1A-223ENST00000545605 NRAPQ86VF7 1730 aa15.37■□□□□ 0.05
SCNN1A-223ENST00000545605 SOX12O15370 315 aa15.36■□□□□ 0.05
SCNN1A-223ENST00000545605 U2AF1L5P0DN76 240 aaPredicted RBP15.36■□□□□ 0.05
SCNN1A-223ENST00000545605 HOXC9P31274 260 aa15.36■□□□□ 0.05
SCNN1A-223ENST00000545605 U2AF1Q01081 240 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCNN1A-223ENST00000545605 RUNDC1Q96C34 613 aa15.36■□□□□ 0.05
SCNN1A-223ENST00000545605 PKD1L3Q7Z443 1732 aa15.36■□□□□ 0.05
SCNN1A-223ENST00000545605 IGSF1Q8N6C5 1336 aa15.36■□□□□ 0.05
SCNN1A-223ENST00000545605 NWD2Q9ULI1 1742 aa15.35■□□□□ 0.05
SCNN1A-223ENST00000545605 U2SURPO15042 1029 aaKnown RBP15.35■□□□□ 0.05
SCNN1A-223ENST00000545605 GCP02774 474 aa15.35■□□□□ 0.05
SCNN1A-223ENST00000545605 AMPHP49418 695 aa15.35■□□□□ 0.05
SCNN1A-223ENST00000545605 EIF4A2Q14240 407 aaKnown RBP15.35■□□□□ 0.05
SCNN1A-223ENST00000545605 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
SCNN1A-223ENST00000545605 LMOD2Q6P5Q4 547 aa15.34■□□□□ 0.05
SCNN1A-223ENST00000545605 ARHGEF25Q86VW2 580 aa15.34■□□□□ 0.05
SCNN1A-223ENST00000545605 PNNQ9H307 717 aaKnown RBP15.34■□□□□ 0.05
SCNN1A-223ENST00000545605 TOM1O60784 492 aa15.33■□□□□ 0.04
SCNN1A-223ENST00000545605 RSPH6AQ9H0K4 717 aa15.33■□□□□ 0.04
SCNN1A-223ENST00000545605 ZNF521Q96K83 1311 aa15.33■□□□□ 0.04
SCNN1A-223ENST00000545605 MAPK8IP3Q9UPT6 1336 aa15.33■□□□□ 0.04
SCNN1A-223ENST00000545605 PLEKHG2Q9H7P9 1386 aa15.33■□□□□ 0.04
SCNN1A-223ENST00000545605 FCHSD2O94868 740 aa15.32■□□□□ 0.04
SCNN1A-223ENST00000545605 HSP90AB2PQ58FF8 381 aa15.32■□□□□ 0.04
SCNN1A-223ENST00000545605 CCDC146Q8IYE0 955 aa15.32■□□□□ 0.04
SCNN1A-223ENST00000545605 IP6K1Q92551 441 aa15.32■□□□□ 0.04
SCNN1A-223ENST00000545605 PLEKHF1Q96S99 279 aa15.32■□□□□ 0.04
SCNN1A-223ENST00000545605 PDE3BQ13370 1112 aa15.31■□□□□ 0.04
SCNN1A-223ENST00000545605 COL5A2P05997 1499 aaPredicted RBP15.3■□□□□ 0.04
SCNN1A-223ENST00000545605 KIAA0232Q92628 1395 aa15.3■□□□□ 0.04
SCNN1A-223ENST00000545605 ADAMTS7Q9UKP4 1686 aa15.3■□□□□ 0.04
SCNN1A-223ENST00000545605 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.29■□□□□ 0.04
SCNN1A-223ENST00000545605 ERBB3P21860 1342 aa15.29■□□□□ 0.04
SCNN1A-223ENST00000545605 APAF1O14727 1248 aa15.29■□□□□ 0.04
SCNN1A-223ENST00000545605 CCDC27Q2M243 656 aa15.29■□□□□ 0.04
SCNN1A-223ENST00000545605 PHF23Q9BUL5 403 aaPredicted RBP15.29■□□□□ 0.04
SCNN1A-223ENST00000545605 SHANK3Q9BYB0 1731 aa15.29■□□□□ 0.04
SCNN1A-223ENST00000545605 PRKAR2BP31323 418 aa15.28■□□□□ 0.04
SCNN1A-223ENST00000545605 NEFMP07197 916 aa15.27■□□□□ 0.04
SCNN1A-223ENST00000545605 TCP11L2Q8N4U5 519 aa15.27■□□□□ 0.04
SCNN1A-223ENST00000545605 CERKQ8TCT0 537 aa15.27■□□□□ 0.04
SCNN1A-223ENST00000545605 LRRC59Q96AG4 307 aaKnown RBP15.27■□□□□ 0.04
SCNN1A-223ENST00000545605 HMOX1P09601 288 aa15.26■□□□□ 0.03
SCNN1A-223ENST00000545605 SIPA1L3O60292 1781 aaPredicted RBP15.26■□□□□ 0.03
SCNN1A-223ENST00000545605 UBAP1LF5GYI3 381 aa15.25■□□□□ 0.03
SCNN1A-223ENST00000545605 SCN11AQ9UI33 1791 aa15.24■□□□□ 0.03
SCNN1A-223ENST00000545605 SULT6B1Q6IMI4 303 aa15.24■□□□□ 0.03
SCNN1A-223ENST00000545605 AEBP1Q8IUX7 1158 aa15.24■□□□□ 0.03
SCNN1A-223ENST00000545605 CABLES1Q8TDN4 633 aa15.24■□□□□ 0.03
SCNN1A-223ENST00000545605 EYA1Q99502 592 aa15.24■□□□□ 0.03
SCNN1A-223ENST00000545605 TMPOP42166 694 aaKnown RBP15.23■□□□□ 0.03
SCNN1A-223ENST00000545605 ZC3H6P61129 1189 aaKnown RBP15.23■□□□□ 0.03
SCNN1A-223ENST00000545605 ANKRD24Q8TF21 1146 aa15.23■□□□□ 0.03
SCNN1A-223ENST00000545605 KDM3BQ7LBC6 1761 aa15.22■□□□□ 0.03
SCNN1A-223ENST00000545605 ZBTB7CA1YPR0 619 aa15.22■□□□□ 0.03
SCNN1A-223ENST00000545605 HAP1P54257 671 aaPredicted RBP15.22■□□□□ 0.03
SCNN1A-223ENST00000545605 NFE2L2Q16236 605 aa15.22■□□□□ 0.03
SCNN1A-223ENST00000545605 PRDM11Q9NQV5 511 aa15.22■□□□□ 0.03
SCNN1A-223ENST00000545605 OVOS2A0A0G2JMS6 1433 aa15.21■□□□□ 0.03
SCNN1A-223ENST00000545605 GOLGA2Q08379 1002 aa15.21■□□□□ 0.03
SCNN1A-223ENST00000545605 LMOD3Q0VAK6 560 aa15.21■□□□□ 0.03
SCNN1A-223ENST00000545605 WWC1Q8IX03 1113 aa15.21■□□□□ 0.03
SCNN1A-223ENST00000545605 MEGF6O75095 1541 aa15.21■□□□□ 0.03
SCNN1A-223ENST00000545605 JCADQ9P266 1359 aa15.21■□□□□ 0.02
SCNN1A-223ENST00000545605 SENP3-EIF4A1A0A087X0R7 540 aa15.2■□□□□ 0.02
SCNN1A-223ENST00000545605 PIP4K2BP78356 416 aa15.2■□□□□ 0.02
SCNN1A-223ENST00000545605 RRP7AQ9Y3A4 280 aaKnown RBP15.2■□□□□ 0.02
SCNN1A-223ENST00000545605 SALL2Q9Y467 1007 aaPredicted RBP15.2■□□□□ 0.02
SCNN1A-223ENST00000545605 IL16Q14005 1332 aa15.19■□□□□ 0.02
SCNN1A-223ENST00000545605 E9PSI1 815 aa15.19■□□□□ 0.02
SCNN1A-223ENST00000545605 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
SCNN1A-223ENST00000545605 WDR63Q8IWG1 891 aa15.19■□□□□ 0.02
SCNN1A-223ENST00000545605 LTV1Q96GA3 475 aaPredicted RBP15.19■□□□□ 0.02
SCNN1A-223ENST00000545605 AXIN2Q9Y2T1 843 aa15.19■□□□□ 0.02
SCNN1A-223ENST00000545605 WDR17Q8IZU2 1322 aa15.18■□□□□ 0.02
SCNN1A-223ENST00000545605 CRB1P82279 1406 aa15.18■□□□□ 0.02
SCNN1A-223ENST00000545605 PHACTR3Q96KR7 559 aa15.18■□□□□ 0.02
SCNN1A-223ENST00000545605 TRIM35Q9UPQ4 493 aa15.18■□□□□ 0.02
SCNN1A-223ENST00000545605 MRC1P22897 1456 aa15.17■□□□□ 0.02
SCNN1A-223ENST00000545605 MAP3K5Q99683 1374 aa15.17■□□□□ 0.02
SCNN1A-223ENST00000545605 CHRNA2Q15822 529 aa15.17■□□□□ 0.02
SCNN1A-223ENST00000545605 NBPF6Q5VWK0 638 aa15.17■□□□□ 0.02
SCNN1A-223ENST00000545605 GAS2L2Q8NHY3 880 aa15.17■□□□□ 0.02
SCNN1A-223ENST00000545605 NBPF4Q96M43 638 aa15.17■□□□□ 0.02
SCNN1A-223ENST00000545605 LRP6O75581 1613 aa15.17■□□□□ 0.02
SCNN1A-223ENST00000545605 SLIT2O94813 1529 aa15.17■□□□□ 0.02
SCNN1A-223ENST00000545605 RIPK4P57078 832 aa15.16■□□□□ 0.02
SCNN1A-223ENST00000545605 CALD1Q05682 793 aaKnown RBP15.16■□□□□ 0.02
SCNN1A-223ENST00000545605 SLFN5Q08AF3 891 aa15.16■□□□□ 0.02
SCNN1A-223ENST00000545605 DUSP27Q5VZP5 1158 aa15.16■□□□□ 0.02
SCNN1A-223ENST00000545605 TRMT2AQ8IZ69 625 aaKnown RBP15.16■□□□□ 0.02
SCNN1A-223ENST00000545605 PAPPAQ13219 1627 aa15.15■□□□□ 0.02
SCNN1A-223ENST00000545605 NEUROD2Q15784 382 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms