RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 AXIN2Q9Y2T1 843 aa27.97■■■□□ 2.07
CHD4-213ENST00000545584 USP31Q70CQ4 1352 aa27.97■■■□□ 2.07
CHD4-213ENST00000545584 CSB-PGBD3P0DP91 1061 aa27.96■■■□□ 2.07
CHD4-213ENST00000545584 NME9Q86XW9 330 aa27.96■■■□□ 2.07
CHD4-213ENST00000545584 EDC4Q6P2E9 1401 aaKnown RBP27.95■■■□□ 2.07
CHD4-213ENST00000545584 NINLQ9Y2I6 1382 aa27.95■■■□□ 2.06
CHD4-213ENST00000545584 DISP2A7MBM2 1401 aa27.93■■■□□ 2.06
CHD4-213ENST00000545584 NFAT5O94916 1531 aa27.93■■■□□ 2.06
CHD4-213ENST00000545584 C11orf95C9JLR9 678 aaPredicted RBP27.93■■■□□ 2.06
CHD4-213ENST00000545584 PCGF6Q9BYE7 350 aa27.93■■■□□ 2.06
CHD4-213ENST00000545584 A0A1W2PP64 1363 aa27.93■■■□□ 2.06
CHD4-213ENST00000545584 PARP4Q9UKK3 1724 aaKnown RBP27.92■■■□□ 2.06
CHD4-213ENST00000545584 CDCA7Q9BWT1 371 aaPredicted RBP27.91■■■□□ 2.06
CHD4-213ENST00000545584 TIMELESSQ9UNS1 1208 aa27.91■■■□□ 2.06
CHD4-213ENST00000545584 TNS1Q9HBL0 1735 aaKnown RBP27.91■■■□□ 2.06
CHD4-213ENST00000545584 USP47Q96K76 1375 aa27.9■■■□□ 2.06
CHD4-213ENST00000545584 APBA3O96018 575 aa27.9■■■□□ 2.06
CHD4-213ENST00000545584 DDB1Q16531 1140 aa27.9■■■□□ 2.06
CHD4-213ENST00000545584 CLSPNQ9HAW4 1339 aa27.9■■■□□ 2.06
CHD4-213ENST00000545584 ABCC6O95255 1503 aa27.89■■■□□ 2.06
CHD4-213ENST00000545584 USP54Q70EL1 1684 aa27.89■■■□□ 2.06
CHD4-213ENST00000545584 TMF1P82094 1093 aa27.89■■■□□ 2.06
CHD4-213ENST00000545584 CARD10Q9BWT7 1032 aa27.89■■■□□ 2.06
CHD4-213ENST00000545584 RGPD5Q99666 1765 aa27.88■■■□□ 2.05
CHD4-213ENST00000545584 EZH2Q15910 746 aaKnown RBP27.87■■■□□ 2.05
CHD4-213ENST00000545584 OVOS2A0A0G2JMS6 1433 aa27.85■■■□□ 2.05
CHD4-213ENST00000545584 OVOS2A0A0J9YW53 1432 aa27.85■■■□□ 2.05
CHD4-213ENST00000545584 OVOS2Q6IE36 1432 aa27.85■■■□□ 2.05
CHD4-213ENST00000545584 PARD3Q8TEW0 1356 aa27.85■■■□□ 2.05
CHD4-213ENST00000545584 PSDA5PKW4 1024 aaPredicted RBP27.84■■■□□ 2.05
CHD4-213ENST00000545584 CAMKK2Q96RR4 588 aa27.84■■■□□ 2.05
CHD4-213ENST00000545584 CCDC7Q96M83 1385 aa27.84■■■□□ 2.05
CHD4-213ENST00000545584 CDCA8Q53HL2 280 aa27.83■■■□□ 2.05
CHD4-213ENST00000545584 LRRC37A3O60309 1634 aa27.82■■■□□ 2.04
CHD4-213ENST00000545584 WNK3Q9BYP7 1800 aa27.81■■■□□ 2.04
CHD4-213ENST00000545584 COG3Q96JB2 828 aa27.8■■■□□ 2.04
CHD4-213ENST00000545584 ANKRD36BQ8N2N9 1353 aa27.8■■■□□ 2.04
CHD4-213ENST00000545584 LTN1O94822 1766 aa27.8■■■□□ 2.04
CHD4-213ENST00000545584 ERBB3P21860 1342 aa27.79■■■□□ 2.04
CHD4-213ENST00000545584 EXOC5O00471 708 aa27.79■■■□□ 2.04
CHD4-213ENST00000545584 NLRP2Q9NX02 1062 aa27.79■■■□□ 2.04
CHD4-213ENST00000545584 R3HDM1Q15032 1099 aaKnown RBP27.77■■■□□ 2.04
CHD4-213ENST00000545584 ANKRD24Q8TF21 1146 aa27.76■■■□□ 2.03
CHD4-213ENST00000545584 PEAK1Q9H792 1746 aa27.75■■■□□ 2.03
CHD4-213ENST00000545584 MARCH10Q8NA82 808 aaPredicted RBP27.75■■■□□ 2.03
CHD4-213ENST00000545584 SRCAPQ6ZRS2 3230 aa27.73■■■□□ 2.03
CHD4-213ENST00000545584 NBPF14Q5TI25 921 aa27.73■■■□□ 2.03
CHD4-213ENST00000545584 IP6K1Q92551 441 aa27.73■■■□□ 2.03
CHD4-213ENST00000545584 BCL11BQ9C0K0 894 aaPredicted RBP27.72■■■□□ 2.03
CHD4-213ENST00000545584 BCL9O00512 1426 aa27.71■■■□□ 2.03
CHD4-213ENST00000545584 IL2RBP14784 551 aa27.7■■■□□ 2.02
CHD4-213ENST00000545584 SBF2Q86WG5 1849 aa27.69■■■□□ 2.02
CHD4-213ENST00000545584 RREB1Q92766 1687 aa27.69■■■□□ 2.02
CHD4-213ENST00000545584 TNS2Q63HR2 1409 aa27.69■■■□□ 2.02
CHD4-213ENST00000545584 AMPHP49418 695 aa27.69■■■□□ 2.02
CHD4-213ENST00000545584 CCER1Q8TC90 406 aaPredicted RBP27.69■■■□□ 2.02
CHD4-213ENST00000545584 LRP5O75197 1615 aa27.68■■■□□ 2.02
CHD4-213ENST00000545584 PLSCR1O15162 318 aa27.68■■■□□ 2.02
CHD4-213ENST00000545584 LTV1Q96GA3 475 aaPredicted RBP27.68■■■□□ 2.02
CHD4-213ENST00000545584 MAP3K19Q56UN5 1328 aa27.67■■■□□ 2.02
CHD4-213ENST00000545584 FYB1O15117 783 aa27.66■■■□□ 2.02
CHD4-213ENST00000545584 GGNBP2Q9H3C7 697 aa27.66■■■□□ 2.02
CHD4-213ENST00000545584 NUP188Q5SRE5 1749 aa27.65■■■□□ 2.02
CHD4-213ENST00000545584 HOXC9P31274 260 aa27.64■■■□□ 2.02
CHD4-213ENST00000545584 FBLN1P23142 703 aa27.63■■■□□ 2.01
CHD4-213ENST00000545584 FAM208AQ9UK61 1670 aaKnown RBP27.62■■■□□ 2.01
CHD4-213ENST00000545584 PTF1AQ7RTS3 328 aa27.62■■■□□ 2.01
CHD4-213ENST00000545584 RGPD3A6NKT7 1758 aaPredicted RBP27.62■■■□□ 2.01
CHD4-213ENST00000545584 RGPD4Q7Z3J3 1758 aa27.62■■■□□ 2.01
CHD4-213ENST00000545584 RTL1A6NKG5 1358 aa27.6■■■□□ 2.01
CHD4-213ENST00000545584 RRS1Q15050 365 aaKnown RBP27.59■■■□□ 2.01
CHD4-213ENST00000545584 KIF20BQ96Q89 1820 aa27.57■■■□□ 2
CHD4-213ENST00000545584 EIF4G2P78344 907 aaKnown RBP eCLIP27.56■■■□□ 2
CHD4-213ENST00000545584 ACSBG1Q96GR2 724 aa27.56■■■□□ 2
CHD4-213ENST00000545584 POLR3GLQ9BT43 218 aa27.56■■■□□ 2
CHD4-213ENST00000545584 NSD3Q9BZ95 1437 aa27.56■■■□□ 2
CHD4-213ENST00000545584 KCNQ2O43526 872 aa27.55■■■□□ 2
CHD4-213ENST00000545584 CARD14Q9BXL6 1004 aa27.55■■■□□ 2
CHD4-213ENST00000545584 MYOM1P52179 1685 aa27.55■■■□□ 2
CHD4-213ENST00000545584 SMG6Q86US8 1419 aaKnown RBP27.54■■■□□ 2
CHD4-213ENST00000545584 DDX54Q8TDD1 881 aaKnown RBP27.53■■■□□ 2
CHD4-213ENST00000545584 TXNRD1Q16881 649 aa27.52■■■□□ 2
CHD4-213ENST00000545584 NHSQ6T4R5 1651 aa27.52■■■□□ 2
CHD4-213ENST00000545584 PROM2Q8N271 834 aa27.51■■□□□ 1.99
CHD4-213ENST00000545584 KAT6BQ8WYB5 2073 aa27.5■■□□□ 1.99
CHD4-213ENST00000545584 KIF24Q5T7B8 1368 aa27.5■■□□□ 1.99
CHD4-213ENST00000545584 FLT4P35916 1363 aa27.49■■□□□ 1.99
CHD4-213ENST00000545584 CGNL1Q0VF96 1302 aa27.49■■□□□ 1.99
CHD4-213ENST00000545584 HSPA5P11021 654 aaKnown RBP27.48■■□□□ 1.99
CHD4-213ENST00000545584 INSRP06213 1382 aa27.48■■□□□ 1.99
CHD4-213ENST00000545584 HSP90AB2PQ58FF8 381 aa27.47■■□□□ 1.99
CHD4-213ENST00000545584 NBPF6Q5VWK0 638 aa27.47■■□□□ 1.99
CHD4-213ENST00000545584 ZCRB1Q8TBF4 217 aaKnown RBP27.47■■□□□ 1.99
CHD4-213ENST00000545584 NBPF4Q96M43 638 aa27.47■■□□□ 1.99
CHD4-213ENST00000545584 SPON1Q9HCB6 807 aa27.47■■□□□ 1.99
CHD4-213ENST00000545584 ANO8Q9HCE9 1232 aaPredicted RBP27.47■■□□□ 1.99
CHD4-213ENST00000545584 STK32BQ9NY57 414 aa27.47■■□□□ 1.99
CHD4-213ENST00000545584 RGPD2P0DJD1 1756 aa27.47■■□□□ 1.99
CHD4-213ENST00000545584 RAPGEF4Q8WZA2 1011 aa27.46■■□□□ 1.99
CHD4-213ENST00000545584 USHBP1Q8N6Y0 703 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms