RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 TWISTNBQ3B726 338 aaPredicted RBP21.2■□□□□ 0.98
SEC23A-203ENST00000545328 RBM42Q9BTD8 480 aaKnown RBP21.2■□□□□ 0.98
SEC23A-203ENST00000545328 KIF20BQ96Q89 1820 aa21.2■□□□□ 0.98
SEC23A-203ENST00000545328 HSP90AB1P08238 724 aaKnown RBP21.2■□□□□ 0.98
SEC23A-203ENST00000545328 APBB1O00213 710 aa21.19■□□□□ 0.98
SEC23A-203ENST00000545328 TRAK2O60296 914 aa21.19■□□□□ 0.98
SEC23A-203ENST00000545328 HSP90AA1P07900 732 aaKnown RBP21.19■□□□□ 0.98
SEC23A-203ENST00000545328 KRT24Q2M2I5 525 aa21.19■□□□□ 0.98
SEC23A-203ENST00000545328 SIRT2Q8IXJ6 389 aa21.18■□□□□ 0.98
SEC23A-203ENST00000545328 GOLGA6L3A6NEY3 463 aa21.18■□□□□ 0.98
SEC23A-203ENST00000545328 CD2BP2O95400 341 aaKnown RBP21.18■□□□□ 0.98
SEC23A-203ENST00000545328 MED14O60244 1454 aa21.17■□□□□ 0.98
SEC23A-203ENST00000545328 GNAI1P63096 354 aa21.17■□□□□ 0.98
SEC23A-203ENST00000545328 XRCC6P12956 609 aaKnown RBP eCLIP21.16■□□□□ 0.98
SEC23A-203ENST00000545328 IL13P35225 146 aa21.16■□□□□ 0.98
SEC23A-203ENST00000545328 L1TD1Q5T7N2 865 aaKnown RBP21.16■□□□□ 0.98
SEC23A-203ENST00000545328 FAM69CQ0P6D2 419 aa21.15■□□□□ 0.98
SEC23A-203ENST00000545328 TBC1D9Q6ZT07 1266 aa21.15■□□□□ 0.98
SEC23A-203ENST00000545328 AEBP1Q8IUX7 1158 aa21.15■□□□□ 0.98
SEC23A-203ENST00000545328 CLTCQ00610 1675 aaKnown RBP21.15■□□□□ 0.98
SEC23A-203ENST00000545328 COG3Q96JB2 828 aa21.14■□□□□ 0.97
SEC23A-203ENST00000545328 RRAGDQ9NQL2 400 aaPredicted RBP21.14■□□□□ 0.97
SEC23A-203ENST00000545328 BMP2KLQ5H9B9 411 aa21.13■□□□□ 0.97
SEC23A-203ENST00000545328 ZNF692Q9BU19 519 aaPredicted RBP21.13■□□□□ 0.97
SEC23A-203ENST00000545328 IFT57Q9NWB7 429 aa21.13■□□□□ 0.97
SEC23A-203ENST00000545328 WASLO00401 505 aaPredicted RBP21.13■□□□□ 0.97
SEC23A-203ENST00000545328 RBM25P49756 843 aaKnown RBP21.13■□□□□ 0.97
SEC23A-203ENST00000545328 FAM43AQ8N2R8 423 aa21.13■□□□□ 0.97
SEC23A-203ENST00000545328 NUDT16Q96DE0 195 aaKnown RBP21.12■□□□□ 0.97
SEC23A-203ENST00000545328 C16orf71Q8IYS4 520 aaPredicted RBP21.12■□□□□ 0.97
SEC23A-203ENST00000545328 TNPO1Q92973 898 aaKnown RBP21.11■□□□□ 0.97
SEC23A-203ENST00000545328 GCC1Q96CN9 775 aa21.11■□□□□ 0.97
SEC23A-203ENST00000545328 RIMS2Q9UQ26 1411 aa21.11■□□□□ 0.97
SEC23A-203ENST00000545328 CALD1Q05682 793 aaKnown RBP21.11■□□□□ 0.97
SEC23A-203ENST00000545328 KIF2CQ99661 725 aa21.11■□□□□ 0.97
SEC23A-203ENST00000545328 TSPOAP1O95153 1857 aa21.1■□□□□ 0.97
SEC23A-203ENST00000545328 MCM10Q7L590 875 aa21.1■□□□□ 0.97
SEC23A-203ENST00000545328 METP08581 1390 aa21.09■□□□□ 0.97
SEC23A-203ENST00000545328 SULT6B1Q6IMI4 303 aa21.09■□□□□ 0.97
SEC23A-203ENST00000545328 CFAP44Q96MT7 982 aa21.09■□□□□ 0.97
SEC23A-203ENST00000545328 ABCC4O15439 1325 aa21.08■□□□□ 0.97
SEC23A-203ENST00000545328 ZNF853P0CG23 659 aa21.08■□□□□ 0.96
SEC23A-203ENST00000545328 OTUD7AQ8TE49 926 aaPredicted RBP21.08■□□□□ 0.96
SEC23A-203ENST00000545328 MIS18AQ9NYP9 233 aa21.07■□□□□ 0.96
SEC23A-203ENST00000545328 PODXL2Q9NZ53 605 aa21.07■□□□□ 0.96
SEC23A-203ENST00000545328 GSPT1P15170 499 aaKnown RBP21.07■□□□□ 0.96
SEC23A-203ENST00000545328 ZNF428Q96B54 188 aa21.07■□□□□ 0.96
SEC23A-203ENST00000545328 PTCH1Q13635 1447 aa21.07■□□□□ 0.96
SEC23A-203ENST00000545328 SMARCA5O60264 1052 aaPredicted RBP21.06■□□□□ 0.96
SEC23A-203ENST00000545328 DLG5Q8TDM6 1919 aa21.06■□□□□ 0.96
SEC23A-203ENST00000545328 ATP7BP35670 1465 aa21.06■□□□□ 0.96
SEC23A-203ENST00000545328 CPS1P31327 1500 aa21.06■□□□□ 0.96
SEC23A-203ENST00000545328 ARHGAP45Q92619 1136 aa21.06■□□□□ 0.96
SEC23A-203ENST00000545328 A2ML1A8K2U0 1454 aa21.06■□□□□ 0.96
SEC23A-203ENST00000545328 EDC4Q6P2E9 1401 aaKnown RBP21.05■□□□□ 0.96
SEC23A-203ENST00000545328 CDC42BPGQ6DT37 1551 aa21.05■□□□□ 0.96
SEC23A-203ENST00000545328 FSD2A1L4K1 749 aa21.05■□□□□ 0.96
SEC23A-203ENST00000545328 DDX11L8A8MPP1 907 aa21.05■□□□□ 0.96
SEC23A-203ENST00000545328 BRPF1P55201 1214 aaPredicted RBP21.05■□□□□ 0.96
SEC23A-203ENST00000545328 API5Q9BZZ5 524 aaKnown RBP21.05■□□□□ 0.96
SEC23A-203ENST00000545328 GAS2L2Q8NHY3 880 aa21.04■□□□□ 0.96
SEC23A-203ENST00000545328 SNX21Q969T3 373 aa21.04■□□□□ 0.96
SEC23A-203ENST00000545328 CCDC61Q9Y6R9 512 aa21.04■□□□□ 0.96
SEC23A-203ENST00000545328 AK9Q5TCS8 1911 aa21.04■□□□□ 0.96
SEC23A-203ENST00000545328 LMOD3Q0VAK6 560 aa21.03■□□□□ 0.96
SEC23A-203ENST00000545328 CHMP4BQ9H444 224 aaKnown RBP21.03■□□□□ 0.96
SEC23A-203ENST00000545328 SSFA2P28290 1259 aa21.03■□□□□ 0.96
SEC23A-203ENST00000545328 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
SEC23A-203ENST00000545328 K7ELQ4 463 aaPredicted RBP21.02■□□□□ 0.96
SEC23A-203ENST00000545328 CDC45O75419 566 aa21.02■□□□□ 0.96
SEC23A-203ENST00000545328 DDIT3P35638 169 aa21.02■□□□□ 0.96
SEC23A-203ENST00000545328 PLEKHM2Q8IWE5 1019 aa21.02■□□□□ 0.96
SEC23A-203ENST00000545328 EIF4A2Q14240 407 aaKnown RBP21.02■□□□□ 0.96
SEC23A-203ENST00000545328 CPSF1Q10570 1443 aaKnown RBP21.02■□□□□ 0.95
SEC23A-203ENST00000545328 PRR36Q9H6K5 1346 aa21.01■□□□□ 0.95
SEC23A-203ENST00000545328 ESF1Q9H501 851 aaKnown RBP21.01■□□□□ 0.95
SEC23A-203ENST00000545328 PIK3R4Q99570 1358 aa21.01■□□□□ 0.95
SEC23A-203ENST00000545328 HSP90AB2PQ58FF8 381 aa21■□□□□ 0.95
SEC23A-203ENST00000545328 SLC4A10Q6U841 1118 aa21■□□□□ 0.95
SEC23A-203ENST00000545328 NCOA3Q9Y6Q9 1424 aa21■□□□□ 0.95
SEC23A-203ENST00000545328 CDK12Q9NYV4 1490 aaPredicted RBP21■□□□□ 0.95
SEC23A-203ENST00000545328 GBP4Q96PP9 640 aa20.99■□□□□ 0.95
SEC23A-203ENST00000545328 GRPEL1Q9HAV7 217 aa20.99■□□□□ 0.95
SEC23A-203ENST00000545328 MEIS3Q99687 375 aa20.99■□□□□ 0.95
SEC23A-203ENST00000545328 RAB3GAP1Q15042 981 aa20.98■□□□□ 0.95
SEC23A-203ENST00000545328 GAS2L3Q86XJ1 694 aa20.98■□□□□ 0.95
SEC23A-203ENST00000545328 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
SEC23A-203ENST00000545328 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
SEC23A-203ENST00000545328 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
SEC23A-203ENST00000545328 KNDC1Q76NI1 1749 aa20.98■□□□□ 0.95
SEC23A-203ENST00000545328 FOXO3O43524 673 aa20.98■□□□□ 0.95
SEC23A-203ENST00000545328 MSH6P52701 1360 aa20.97■□□□□ 0.95
SEC23A-203ENST00000545328 F6X3S4 739 aa20.97■□□□□ 0.95
SEC23A-203ENST00000545328 MRE11P49959 708 aa20.96■□□□□ 0.95
SEC23A-203ENST00000545328 DCTPP1Q9H773 170 aa20.96■□□□□ 0.95
SEC23A-203ENST00000545328 TTC22Q5TAA0 569 aa20.96■□□□□ 0.95
SEC23A-203ENST00000545328 SLC4A2P04920 1241 aa20.95■□□□□ 0.94
SEC23A-203ENST00000545328 NECTIN2Q92692 538 aa20.95■□□□□ 0.94
SEC23A-203ENST00000545328 TSHZ3Q63HK5 1081 aa20.95■□□□□ 0.94
SEC23A-203ENST00000545328 DLC1Q96QB1 1528 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms