RNA–Protein interactions for RNA: ENST00000545065.1

KNTC1-214, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-214ENST00000545065 AKT1S1Q96B36 256 aa12.73□□□□□ -0.37
KNTC1-214ENST00000545065 LRRC4BQ9NT99 713 aa12.73□□□□□ -0.37
KNTC1-214ENST00000545065 CUL9Q8IWT3 2517 aa12.72□□□□□ -0.37
KNTC1-214ENST00000545065 CCDC85CA6NKD9 419 aa12.72□□□□□ -0.37
KNTC1-214ENST00000545065 NHSQ6T4R5 1651 aa12.71□□□□□ -0.37
KNTC1-214ENST00000545065 CHIC2Q9UKJ5 165 aa12.71□□□□□ -0.37
KNTC1-214ENST00000545065 ANKRD30AQ9BXX3 1397 aa12.7□□□□□ -0.38
KNTC1-214ENST00000545065 THRAP3Q9Y2W1 955 aaKnown RBP12.7□□□□□ -0.38
KNTC1-214ENST00000545065 BTAF1O14981 1849 aa12.69□□□□□ -0.38
KNTC1-214ENST00000545065 KNDC1Q76NI1 1749 aa12.69□□□□□ -0.38
KNTC1-214ENST00000545065 C10orf71Q711Q0 1435 aa12.69□□□□□ -0.38
KNTC1-214ENST00000545065 LBX1P52954 281 aa12.67□□□□□ -0.38
KNTC1-214ENST00000545065 ZC3H6P61129 1189 aaKnown RBP12.67□□□□□ -0.38
KNTC1-214ENST00000545065 CD2APQ9Y5K6 639 aa12.67□□□□□ -0.38
KNTC1-214ENST00000545065 PXDNLA1KZ92 1463 aa12.66□□□□□ -0.38
KNTC1-214ENST00000545065 PKD1L3Q7Z443 1732 aa12.66□□□□□ -0.38
KNTC1-214ENST00000545065 ANKRD50Q9ULJ7 1429 aa12.66□□□□□ -0.38
KNTC1-214ENST00000545065 EVA1CP58658 441 aa12.66□□□□□ -0.38
KNTC1-214ENST00000545065 TNRC6CQ9HCJ0 1690 aaKnown RBP12.66□□□□□ -0.38
KNTC1-214ENST00000545065 KCPQ6ZWJ8 1503 aa12.66□□□□□ -0.38
KNTC1-214ENST00000545065 VIRMAQ69YN4 1812 aaKnown RBP12.65□□□□□ -0.38
KNTC1-214ENST00000545065 CTCFP49711 727 aaPredicted RBP12.65□□□□□ -0.38
KNTC1-214ENST00000545065 DDB1Q16531 1140 aa12.65□□□□□ -0.38
KNTC1-214ENST00000545065 C16orf71Q8IYS4 520 aaPredicted RBP12.65□□□□□ -0.38
KNTC1-214ENST00000545065 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
KNTC1-214ENST00000545065 IGSF1Q8N6C5 1336 aa12.64□□□□□ -0.39
KNTC1-214ENST00000545065 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
KNTC1-214ENST00000545065 SMC1BQ8NDV3 1235 aa12.63□□□□□ -0.39
KNTC1-214ENST00000545065 KIF1BO60333 1816 aa12.62□□□□□ -0.39
KNTC1-214ENST00000545065 PPLO60437 1756 aa12.62□□□□□ -0.39
KNTC1-214ENST00000545065 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
KNTC1-214ENST00000545065 ACIN1Q9UKV3 1341 aaKnown RBP12.62□□□□□ -0.39
KNTC1-214ENST00000545065 MSL1Q68DK7 614 aa12.61□□□□□ -0.39
KNTC1-214ENST00000545065 STK26Q9P289 416 aa12.61□□□□□ -0.39
KNTC1-214ENST00000545065 MKRN1Q9UHC7 482 aaKnown RBP12.61□□□□□ -0.39
KNTC1-214ENST00000545065 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
KNTC1-214ENST00000545065 CRB1P82279 1406 aa12.61□□□□□ -0.39
KNTC1-214ENST00000545065 HSPA8P11142 646 aaKnown RBP12.6□□□□□ -0.39
KNTC1-214ENST00000545065 PRPF38BQ5VTL8 546 aaKnown RBP12.6□□□□□ -0.39
KNTC1-214ENST00000545065 BRD4O60885 1362 aaPredicted RBP12.59□□□□□ -0.39
KNTC1-214ENST00000545065 RRAGCQ9HB90 399 aa12.59□□□□□ -0.39
KNTC1-214ENST00000545065 TRPM1Q7Z4N2 1603 aa12.59□□□□□ -0.39
KNTC1-214ENST00000545065 A0A0C4DFX4 3053 aa12.58□□□□□ -0.39
KNTC1-214ENST00000545065 ABCC11Q96J66 1382 aa12.58□□□□□ -0.4
KNTC1-214ENST00000545065 PIK3C2AO00443 1686 aa12.58□□□□□ -0.4
KNTC1-214ENST00000545065 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
KNTC1-214ENST00000545065 WBP1LQ9NX94 342 aa12.57□□□□□ -0.4
KNTC1-214ENST00000545065 DLL1O00548 723 aa12.56□□□□□ -0.4
KNTC1-214ENST00000545065 KCNQ4P56696 695 aa12.56□□□□□ -0.4
KNTC1-214ENST00000545065 TFCP2L1Q9NZI6 479 aa12.56□□□□□ -0.4
KNTC1-214ENST00000545065 CPDO75976 1380 aa12.56□□□□□ -0.4
KNTC1-214ENST00000545065 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
KNTC1-214ENST00000545065 ANKARQ7Z5J8 1434 aa12.55□□□□□ -0.4
KNTC1-214ENST00000545065 VGFO15240 615 aaPredicted RBP12.55□□□□□ -0.4
KNTC1-214ENST00000545065 ACSBG1Q96GR2 724 aa12.55□□□□□ -0.4
KNTC1-214ENST00000545065 COL18A1P39060 1754 aa12.54□□□□□ -0.4
KNTC1-214ENST00000545065 N4BP2Q86UW6 1770 aaPredicted RBP12.54□□□□□ -0.4
KNTC1-214ENST00000545065 KANK4Q5T7N3 995 aaPredicted RBP12.54□□□□□ -0.4
KNTC1-214ENST00000545065 NUTM2GQ5VZR2 741 aa12.54□□□□□ -0.4
KNTC1-214ENST00000545065 SBF1O95248 1867 aa12.54□□□□□ -0.4
KNTC1-214ENST00000545065 PRR36Q9H6K5 1346 aa12.54□□□□□ -0.4
KNTC1-214ENST00000545065 CNTNAP1P78357 1384 aa12.54□□□□□ -0.4
KNTC1-214ENST00000545065 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
KNTC1-214ENST00000545065 LY75O60449 1722 aa12.53□□□□□ -0.4
KNTC1-214ENST00000545065 USP6P35125 1406 aa12.53□□□□□ -0.4
KNTC1-214ENST00000545065 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
KNTC1-214ENST00000545065 AIDAQ96BJ3 306 aa12.52□□□□□ -0.41
KNTC1-214ENST00000545065 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.41
KNTC1-214ENST00000545065 USP54Q70EL1 1684 aa12.51□□□□□ -0.41
KNTC1-214ENST00000545065 C9orf131Q5VYM1 1079 aa12.51□□□□□ -0.41
KNTC1-214ENST00000545065 TMEM132EQ6IEE7 984 aa12.51□□□□□ -0.41
KNTC1-214ENST00000545065 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
KNTC1-214ENST00000545065 PLEKHG2Q9H7P9 1386 aa12.51□□□□□ -0.41
KNTC1-214ENST00000545065 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
KNTC1-214ENST00000545065 SZT2Q5T011 3432 aa12.5□□□□□ -0.41
KNTC1-214ENST00000545065 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
KNTC1-214ENST00000545065 ANKRD30BQ9BXX2 1392 aa12.5□□□□□ -0.41
KNTC1-214ENST00000545065 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
KNTC1-214ENST00000545065 KDM2BQ8NHM5 1336 aa12.49□□□□□ -0.41
KNTC1-214ENST00000545065 YTHDC2Q9H6S0 1430 aaKnown RBP12.48□□□□□ -0.41
KNTC1-214ENST00000545065 VEGFBP49765 207 aa12.48□□□□□ -0.41
KNTC1-214ENST00000545065 ARFGEF1Q9Y6D6 1849 aa12.48□□□□□ -0.41
KNTC1-214ENST00000545065 SLC27A3Q5K4L6 730 aa12.47□□□□□ -0.41
KNTC1-214ENST00000545065 RGPD5Q99666 1765 aa12.47□□□□□ -0.41
KNTC1-214ENST00000545065 CASP8AP2Q9UKL3 1982 aa12.47□□□□□ -0.41
KNTC1-214ENST00000545065 NUP155O75694 1391 aa12.46□□□□□ -0.41
KNTC1-214ENST00000545065 ADGRF5Q8IZF2 1346 aa12.46□□□□□ -0.41
KNTC1-214ENST00000545065 ARHGAP27Q6ZUM4 889 aa12.46□□□□□ -0.41
KNTC1-214ENST00000545065 ABCC6O95255 1503 aa12.46□□□□□ -0.42
KNTC1-214ENST00000545065 MSH5O43196 834 aa12.45□□□□□ -0.42
KNTC1-214ENST00000545065 MCOLN1Q9GZU1 580 aa12.45□□□□□ -0.42
KNTC1-214ENST00000545065 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
KNTC1-214ENST00000545065 PITPNM2Q9BZ72 1349 aa12.44□□□□□ -0.42
KNTC1-214ENST00000545065 HABP4Q5JVS0 413 aaKnown RBP12.44□□□□□ -0.42
KNTC1-214ENST00000545065 TOM1L2Q6ZVM7 507 aa12.44□□□□□ -0.42
KNTC1-214ENST00000545065 SMIM5Q71RC9 77 aa12.44□□□□□ -0.42
KNTC1-214ENST00000545065 ADAMTS7Q9UKP4 1686 aa12.43□□□□□ -0.42
KNTC1-214ENST00000545065 SAFB2Q14151 953 aaKnown RBP eCLIP12.43□□□□□ -0.42
KNTC1-214ENST00000545065 SIRT1Q96EB6 747 aa12.43□□□□□ -0.42
KNTC1-214ENST00000545065 CDCA7Q9BWT1 371 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms