RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 CLCN6P51797 869 aa6.33□□□□□ -1.4
CNGA1-209ENST00000544810 FAM98CQ17RN3 349 aaKnown RBP6.33□□□□□ -1.4
CNGA1-209ENST00000544810 BARGINQ6ZT62 677 aa6.33□□□□□ -1.4
CNGA1-209ENST00000544810 PLCH1Q4KWH8 1693 aa6.33□□□□□ -1.4
CNGA1-209ENST00000544810 NWD2Q9ULI1 1742 aa6.32□□□□□ -1.4
CNGA1-209ENST00000544810 CAMTA1Q9Y6Y1 1673 aa6.32□□□□□ -1.4
CNGA1-209ENST00000544810 HFM1A2PYH4 1435 aa6.32□□□□□ -1.4
CNGA1-209ENST00000544810 APBB1O00213 710 aa6.32□□□□□ -1.4
CNGA1-209ENST00000544810 MLLT3P42568 568 aaPredicted RBP6.32□□□□□ -1.4
CNGA1-209ENST00000544810 FAM182BQ5T319 152 aa6.32□□□□□ -1.4
CNGA1-209ENST00000544810 SPDYE1Q8NFV5 336 aaPredicted RBP6.32□□□□□ -1.4
CNGA1-209ENST00000544810 LARP6Q9BRS8 491 aaKnown RBP6.32□□□□□ -1.4
CNGA1-209ENST00000544810 ANO8Q9HCE9 1232 aaPredicted RBP6.32□□□□□ -1.4
CNGA1-209ENST00000544810 KCNQ2O43526 872 aa6.32□□□□□ -1.4
CNGA1-209ENST00000544810 CCDC144AA2RUR9 1427 aa6.31□□□□□ -1.4
CNGA1-209ENST00000544810 DHX57Q6P158 1386 aaKnown RBP6.31□□□□□ -1.4
CNGA1-209ENST00000544810 PDAP1Q13442 181 aaKnown RBP6.31□□□□□ -1.4
CNGA1-209ENST00000544810 NEXMIFQ5QGS0 1516 aa6.31□□□□□ -1.4
CNGA1-209ENST00000544810 AK7Q96M32 723 aa6.3□□□□□ -1.4
CNGA1-209ENST00000544810 PHF8Q9UPP1 1060 aa6.3□□□□□ -1.4
CNGA1-209ENST00000544810 VPS8Q8N3P4 1428 aa6.3□□□□□ -1.4
CNGA1-209ENST00000544810 RREB1Q92766 1687 aa6.3□□□□□ -1.4
CNGA1-209ENST00000544810 THSD7AQ9UPZ6 1657 aa6.3□□□□□ -1.4
CNGA1-209ENST00000544810 NBPF8Q3BBV2 869 aa6.3□□□□□ -1.4
CNGA1-209ENST00000544810 ZNF326Q5BKZ1 582 aaKnown RBP6.3□□□□□ -1.4
CNGA1-209ENST00000544810 NBPF14Q5TI25 921 aa6.3□□□□□ -1.4
CNGA1-209ENST00000544810 EFCAB3Q8N7B9 438 aa6.3□□□□□ -1.4
CNGA1-209ENST00000544810 TNS3Q68CZ2 1445 aa6.3□□□□□ -1.4
CNGA1-209ENST00000544810 NUP188Q5SRE5 1749 aa6.29□□□□□ -1.4
CNGA1-209ENST00000544810 NRAPQ86VF7 1730 aa6.29□□□□□ -1.4
CNGA1-209ENST00000544810 CCER2I3L3R5 266 aa6.29□□□□□ -1.4
CNGA1-209ENST00000544810 TRIM37O94972 964 aa6.29□□□□□ -1.4
CNGA1-209ENST00000544810 FXR2P51116 673 aaKnown RBP eCLIP6.29□□□□□ -1.4
CNGA1-209ENST00000544810 GPIHBP1Q8IV16 184 aa6.29□□□□□ -1.4
CNGA1-209ENST00000544810 CABLES1Q8TDN4 633 aa6.29□□□□□ -1.4
CNGA1-209ENST00000544810 FAM117AQ9C073 453 aa6.29□□□□□ -1.4
CNGA1-209ENST00000544810 FAM83GA6ND36 823 aa6.29□□□□□ -1.4
CNGA1-209ENST00000544810 APBA3O96018 575 aa6.29□□□□□ -1.4
CNGA1-209ENST00000544810 PSEN1P49768 467 aa6.29□□□□□ -1.4
CNGA1-209ENST00000544810 NAIPQ13075 1403 aa6.29□□□□□ -1.4
CNGA1-209ENST00000544810 ZNF467Q7Z7K2 595 aaPredicted RBP6.28□□□□□ -1.4
CNGA1-209ENST00000544810 SPATA31A5Q5VU36 1347 aa6.28□□□□□ -1.4
CNGA1-209ENST00000544810 SPATA31A7Q8IWB4 1347 aa6.28□□□□□ -1.4
CNGA1-209ENST00000544810 NRKQ7Z2Y5 1582 aa6.28□□□□□ -1.4
CNGA1-209ENST00000544810 FAM196AQ6ZSG2 479 aa6.28□□□□□ -1.4
CNGA1-209ENST00000544810 KRT28Q7Z3Y7 464 aa6.28□□□□□ -1.4
CNGA1-209ENST00000544810 ABCA3Q99758 1704 aa6.28□□□□□ -1.4
CNGA1-209ENST00000544810 KIF1AQ12756 1690 aa6.28□□□□□ -1.4
CNGA1-209ENST00000544810 GIGYF1O75420 1035 aaPredicted RBP6.27□□□□□ -1.41
CNGA1-209ENST00000544810 PDE4DQ08499 809 aa6.27□□□□□ -1.41
CNGA1-209ENST00000544810 SMYD5Q6GMV2 418 aa6.27□□□□□ -1.41
CNGA1-209ENST00000544810 CABP2Q9NPB3 220 aa6.27□□□□□ -1.41
CNGA1-209ENST00000544810 FBXO22Q8NEZ5 403 aa6.27□□□□□ -1.41
CNGA1-209ENST00000544810 RRBP1Q9P2E9 1410 aaKnown RBP6.27□□□□□ -1.41
CNGA1-209ENST00000544810 NUTM2FA1L443 756 aa6.27□□□□□ -1.41
CNGA1-209ENST00000544810 TRIM66O15016 1216 aa6.27□□□□□ -1.41
CNGA1-209ENST00000544810 BTG4Q9NY30 223 aa6.27□□□□□ -1.41
CNGA1-209ENST00000544810 SBNO1A3KN83 1393 aa6.26□□□□□ -1.41
CNGA1-209ENST00000544810 ARHGEF10O15013 1369 aa6.26□□□□□ -1.41
CNGA1-209ENST00000544810 CHADLQ6NUI6 762 aa6.26□□□□□ -1.41
CNGA1-209ENST00000544810 REM2Q8IYK8 340 aaPredicted RBP6.26□□□□□ -1.41
CNGA1-209ENST00000544810 SALL2Q9Y467 1007 aaPredicted RBP6.26□□□□□ -1.41
CNGA1-209ENST00000544810 PSME1Q06323 249 aa6.25□□□□□ -1.41
CNGA1-209ENST00000544810 NECTIN2Q92692 538 aa6.25□□□□□ -1.41
CNGA1-209ENST00000544810 MYOM1P52179 1685 aa6.25□□□□□ -1.41
CNGA1-209ENST00000544810 NUP155O75694 1391 aa6.25□□□□□ -1.41
CNGA1-209ENST00000544810 COL14A1Q05707 1796 aaKnown RBP6.24□□□□□ -1.41
CNGA1-209ENST00000544810 CASZ1Q86V15 1759 aa6.24□□□□□ -1.41
CNGA1-209ENST00000544810 FMN2Q9NZ56 1722 aa6.24□□□□□ -1.41
CNGA1-209ENST00000544810 TECPR2O15040 1411 aa6.24□□□□□ -1.41
CNGA1-209ENST00000544810 PTGER2P43116 358 aa6.24□□□□□ -1.41
CNGA1-209ENST00000544810 CLTCL1P53675 1640 aa6.24□□□□□ -1.41
CNGA1-209ENST00000544810 C11orf95C9JLR9 678 aaPredicted RBP6.24□□□□□ -1.41
CNGA1-209ENST00000544810 PIP4P2Q8N4L2 257 aa6.24□□□□□ -1.41
CNGA1-209ENST00000544810 NOP58Q9Y2X3 529 aaKnown RBP6.24□□□□□ -1.41
CNGA1-209ENST00000544810 SPATA31A1Q5TZJ5 1347 aa6.24□□□□□ -1.41
CNGA1-209ENST00000544810 NRXN1Q9ULB1 1477 aa6.23□□□□□ -1.41
CNGA1-209ENST00000544810 CLUAP1Q96AJ1 413 aa6.23□□□□□ -1.41
CNGA1-209ENST00000544810 DDX27Q96GQ7 796 aaKnown RBP6.23□□□□□ -1.41
CNGA1-209ENST00000544810 SYT17Q9BSW7 474 aa6.23□□□□□ -1.41
CNGA1-209ENST00000544810 FHDC1Q9C0D6 1143 aaPredicted RBP6.23□□□□□ -1.41
CNGA1-209ENST00000544810 DLC1Q96QB1 1528 aa6.23□□□□□ -1.41
CNGA1-209ENST00000544810 PLEKHH1Q9ULM0 1364 aa6.23□□□□□ -1.41
CNGA1-209ENST00000544810 ZBTB7AO95365 584 aa6.22□□□□□ -1.41
CNGA1-209ENST00000544810 WAPLQ7Z5K2 1190 aa6.22□□□□□ -1.41
CNGA1-209ENST00000544810 CCDC82Q8N4S0 544 aa6.22□□□□□ -1.41
CNGA1-209ENST00000544810 PDGFDQ9GZP0 370 aaPredicted RBP6.22□□□□□ -1.41
CNGA1-209ENST00000544810 PLEKHG3A1L390 1219 aa6.22□□□□□ -1.41
CNGA1-209ENST00000544810 PDIA4P13667 645 aaKnown RBP6.22□□□□□ -1.41
CNGA1-209ENST00000544810 NLRP6P59044 892 aa6.21□□□□□ -1.41
CNGA1-209ENST00000544810 FAM50AQ14320 339 aaKnown RBP6.21□□□□□ -1.41
CNGA1-209ENST00000544810 ROCK1Q13464 1354 aa6.21□□□□□ -1.41
CNGA1-209ENST00000544810 IFNL1Q8IU54 200 aa6.21□□□□□ -1.42
CNGA1-209ENST00000544810 PDE3BQ13370 1112 aa6.2□□□□□ -1.42
CNGA1-209ENST00000544810 WASHC2AQ641Q2 1341 aa6.2□□□□□ -1.42
CNGA1-209ENST00000544810 RPGRIP1LQ68CZ1 1315 aa6.2□□□□□ -1.42
CNGA1-209ENST00000544810 MAP3K5Q99683 1374 aa6.2□□□□□ -1.42
CNGA1-209ENST00000544810 SHANK3Q9BYB0 1731 aa6.2□□□□□ -1.42
CNGA1-209ENST00000544810 PPP4R2Q9NY27 417 aa6.2□□□□□ -1.42
CNGA1-209ENST00000544810 USP35Q9P2H5 1018 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms