RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 NINLQ9Y2I6 1382 aa18.34■□□□□ 0.53
CIT-214ENST00000544588 TRIM37O94972 964 aa18.34■□□□□ 0.53
CIT-214ENST00000544588 NRAPQ86VF7 1730 aa18.34■□□□□ 0.53
CIT-214ENST00000544588 SLIT3O75094 1523 aa18.33■□□□□ 0.53
CIT-214ENST00000544588 CRB1P82279 1406 aa18.33■□□□□ 0.53
CIT-214ENST00000544588 WDR17Q8IZU2 1322 aa18.33■□□□□ 0.53
CIT-214ENST00000544588 CRYBG1Q9Y4K1 1723 aa18.33■□□□□ 0.52
CIT-214ENST00000544588 EN1Q05925 392 aaPredicted RBP18.32■□□□□ 0.52
CIT-214ENST00000544588 DDB1Q16531 1140 aa18.31■□□□□ 0.52
CIT-214ENST00000544588 NLRP2Q9NX02 1062 aa18.31■□□□□ 0.52
CIT-214ENST00000544588 CARD10Q9BWT7 1032 aa18.3■□□□□ 0.52
CIT-214ENST00000544588 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
CIT-214ENST00000544588 PIK3C2AO00443 1686 aa18.29■□□□□ 0.52
CIT-214ENST00000544588 APBA3O96018 575 aa18.29■□□□□ 0.52
CIT-214ENST00000544588 EIF4G2P78344 907 aaKnown RBP eCLIP18.29■□□□□ 0.52
CIT-214ENST00000544588 LTV1Q96GA3 475 aaPredicted RBP18.29■□□□□ 0.52
CIT-214ENST00000544588 GGNBP2Q9H3C7 697 aa18.29■□□□□ 0.52
CIT-214ENST00000544588 FBLN1P23142 703 aa18.28■□□□□ 0.52
CIT-214ENST00000544588 AMPHP49418 695 aa18.28■□□□□ 0.52
CIT-214ENST00000544588 ANKRD24Q8TF21 1146 aa18.28■□□□□ 0.52
CIT-214ENST00000544588 CDCA7Q9BWT1 371 aaPredicted RBP18.28■□□□□ 0.52
CIT-214ENST00000544588 EXOC5O00471 708 aa18.26■□□□□ 0.51
CIT-214ENST00000544588 HSPA5P11021 654 aaKnown RBP18.26■□□□□ 0.51
CIT-214ENST00000544588 FYB1O15117 783 aa18.25■□□□□ 0.51
CIT-214ENST00000544588 EZH2Q15910 746 aaKnown RBP18.25■□□□□ 0.51
CIT-214ENST00000544588 IP6K1Q92551 441 aa18.25■□□□□ 0.51
CIT-214ENST00000544588 LMO7Q8WWI1 1683 aa18.25■□□□□ 0.51
CIT-214ENST00000544588 EP400Q96L91 3159 aa18.24■□□□□ 0.51
CIT-214ENST00000544588 ERBB3P21860 1342 aa18.23■□□□□ 0.51
CIT-214ENST00000544588 CCDC7Q96M83 1385 aa18.23■□□□□ 0.51
CIT-214ENST00000544588 C11orf95C9JLR9 678 aaPredicted RBP18.23■□□□□ 0.51
CIT-214ENST00000544588 BRWD3Q6RI45 1802 aa18.23■□□□□ 0.51
CIT-214ENST00000544588 NFAT5O94916 1531 aa18.23■□□□□ 0.51
CIT-214ENST00000544588 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
CIT-214ENST00000544588 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
CIT-214ENST00000544588 MAP3K19Q56UN5 1328 aa18.23■□□□□ 0.51
CIT-214ENST00000544588 THSD7AQ9UPZ6 1657 aa18.22■□□□□ 0.51
CIT-214ENST00000544588 PSDA5PKW4 1024 aaPredicted RBP18.22■□□□□ 0.51
CIT-214ENST00000544588 RRS1Q15050 365 aaKnown RBP18.22■□□□□ 0.51
CIT-214ENST00000544588 CARD14Q9BXL6 1004 aa18.22■□□□□ 0.51
CIT-214ENST00000544588 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
CIT-214ENST00000544588 MARCH10Q8NA82 808 aaPredicted RBP18.21■□□□□ 0.51
CIT-214ENST00000544588 IL2RBP14784 551 aa18.2■□□□□ 0.5
CIT-214ENST00000544588 HOXC9P31274 260 aa18.2■□□□□ 0.5
CIT-214ENST00000544588 CAMKK2Q96RR4 588 aa18.2■□□□□ 0.5
CIT-214ENST00000544588 MON2Q7Z3U7 1717 aa18.18■□□□□ 0.5
CIT-214ENST00000544588 OVOS2A0A0G2JMS6 1433 aa18.17■□□□□ 0.5
CIT-214ENST00000544588 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
CIT-214ENST00000544588 PPM1GO15355 546 aaPredicted RBP18.17■□□□□ 0.5
CIT-214ENST00000544588 R3HDM1Q15032 1099 aaKnown RBP18.16■□□□□ 0.5
CIT-214ENST00000544588 BCL11BQ9C0K0 894 aaPredicted RBP18.16■□□□□ 0.5
CIT-214ENST00000544588 ACSBG1Q96GR2 724 aa18.15■□□□□ 0.5
CIT-214ENST00000544588 NBPF14Q5TI25 921 aa18.14■□□□□ 0.49
CIT-214ENST00000544588 PTF1AQ7RTS3 328 aa18.14■□□□□ 0.49
CIT-214ENST00000544588 DDX54Q8TDD1 881 aaKnown RBP18.14■□□□□ 0.49
CIT-214ENST00000544588 PANK3Q9H999 370 aa18.14■□□□□ 0.49
CIT-214ENST00000544588 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
CIT-214ENST00000544588 COL18A1P39060 1754 aa18.14■□□□□ 0.49
CIT-214ENST00000544588 HSP90AB2PQ58FF8 381 aa18.13■□□□□ 0.49
CIT-214ENST00000544588 DISP2A7MBM2 1401 aa18.13■□□□□ 0.49
CIT-214ENST00000544588 TNNT2P45379 298 aaPredicted RBP18.12■□□□□ 0.49
CIT-214ENST00000544588 KCNQ2O43526 872 aa18.11■□□□□ 0.49
CIT-214ENST00000544588 USHBP1Q8N6Y0 703 aa18.11■□□□□ 0.49
CIT-214ENST00000544588 EMILIN1Q9Y6C2 1016 aa18.11■□□□□ 0.49
CIT-214ENST00000544588 ABCC6O95255 1503 aa18.11■□□□□ 0.49
CIT-214ENST00000544588 PARD3Q8TEW0 1356 aa18.1■□□□□ 0.49
CIT-214ENST00000544588 NBPF6Q5VWK0 638 aa18.1■□□□□ 0.49
CIT-214ENST00000544588 NBPF4Q96M43 638 aa18.1■□□□□ 0.49
CIT-214ENST00000544588 RTL1A6NKG5 1358 aa18.08■□□□□ 0.49
CIT-214ENST00000544588 PLSCR1O15162 318 aa18.08■□□□□ 0.48
CIT-214ENST00000544588 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.48
CIT-214ENST00000544588 RAPGEF4Q8WZA2 1011 aa18.08■□□□□ 0.48
CIT-214ENST00000544588 TNS2Q63HR2 1409 aa18.07■□□□□ 0.48
CIT-214ENST00000544588 SMG6Q86US8 1419 aaKnown RBP18.07■□□□□ 0.48
CIT-214ENST00000544588 TATP17735 454 aaPredicted RBP18.06■□□□□ 0.48
CIT-214ENST00000544588 SYTL4Q96C24 671 aaPredicted RBP18.06■□□□□ 0.48
CIT-214ENST00000544588 INSRP06213 1382 aa18.05■□□□□ 0.48
CIT-214ENST00000544588 FLT4P35916 1363 aa18.05■□□□□ 0.48
CIT-214ENST00000544588 KNSTRNQ9Y448 316 aa18.05■□□□□ 0.48
CIT-214ENST00000544588 PARP4Q9UKK3 1724 aaKnown RBP18.05■□□□□ 0.48
CIT-214ENST00000544588 RGPD1P0DJD0 1748 aa18.04■□□□□ 0.48
CIT-214ENST00000544588 USP54Q70EL1 1684 aa18.04■□□□□ 0.48
CIT-214ENST00000544588 TXNRD1Q16881 649 aa18.04■□□□□ 0.48
CIT-214ENST00000544588 MORC1Q86VD1 984 aa18.04■□□□□ 0.48
CIT-214ENST00000544588 POLKQ9UBT6 870 aa18.04■□□□□ 0.48
CIT-214ENST00000544588 LRRC37A3O60309 1634 aa18.04■□□□□ 0.48
CIT-214ENST00000544588 BCL9O00512 1426 aa18.04■□□□□ 0.48
CIT-214ENST00000544588 PROM2Q8N271 834 aa18.03■□□□□ 0.48
CIT-214ENST00000544588 KIF24Q5T7B8 1368 aa18.02■□□□□ 0.47
CIT-214ENST00000544588 RGPD5Q99666 1765 aa18.02■□□□□ 0.47
CIT-214ENST00000544588 PRIM1P49642 420 aaKnown RBP18.01■□□□□ 0.47
CIT-214ENST00000544588 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
CIT-214ENST00000544588 WASHC2AQ641Q2 1341 aa18■□□□□ 0.47
CIT-214ENST00000544588 STK32BQ9NY57 414 aa18■□□□□ 0.47
CIT-214ENST00000544588 ANO8Q9HCE9 1232 aaPredicted RBP17.99■□□□□ 0.47
CIT-214ENST00000544588 LTN1O94822 1766 aa17.99■□□□□ 0.47
CIT-214ENST00000544588 CNGB1Q14028 1251 aaPredicted RBP17.98■□□□□ 0.47
CIT-214ENST00000544588 EYA1Q99502 592 aa17.98■□□□□ 0.47
CIT-214ENST00000544588 TNS1Q9HBL0 1735 aaKnown RBP17.98■□□□□ 0.47
CIT-214ENST00000544588 MEGF6O75095 1541 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms