RNA–Protein interactions for RNA: ENST00000544241.6

TCF4-209, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-209ENST00000544241 MCM2P49736 904 aa12.59□□□□□ -0.39
TCF4-209ENST00000544241 EXOSC9Q06265 439 aaKnown RBP12.59□□□□□ -0.39
TCF4-209ENST00000544241 NOS1P29475 1434 aa12.59□□□□□ -0.39
TCF4-209ENST00000544241 UHRF1BP1LA0JNW5 1464 aa12.59□□□□□ -0.39
TCF4-209ENST00000544241 ERVK-7P63135 1459 aa12.59□□□□□ -0.39
TCF4-209ENST00000544241 SYCP1Q15431 976 aa12.58□□□□□ -0.4
TCF4-209ENST00000544241 CLTCL1P53675 1640 aa12.58□□□□□ -0.4
TCF4-209ENST00000544241 PDIA4P13667 645 aaKnown RBP12.58□□□□□ -0.4
TCF4-209ENST00000544241 ANKRD7Q92527 254 aa12.58□□□□□ -0.4
TCF4-209ENST00000544241 ADGRB2O60241 1585 aa12.57□□□□□ -0.4
TCF4-209ENST00000544241 TMEM51Q9NW97 253 aa12.57□□□□□ -0.4
TCF4-209ENST00000544241 ABCA8O94911 1581 aa12.57□□□□□ -0.4
TCF4-209ENST00000544241 SAMD9LQ8IVG5 1584 aa12.57□□□□□ -0.4
TCF4-209ENST00000544241 GOLGA6L6A8MZA4 724 aa12.57□□□□□ -0.4
TCF4-209ENST00000544241 REC8O95072 547 aa12.57□□□□□ -0.4
TCF4-209ENST00000544241 BRPF1P55201 1214 aaPredicted RBP12.57□□□□□ -0.4
TCF4-209ENST00000544241 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
TCF4-209ENST00000544241 ANKRD36BQ8N2N9 1353 aa12.56□□□□□ -0.4
TCF4-209ENST00000544241 U2AF1L5P0DN76 240 aaPredicted RBP12.56□□□□□ -0.4
TCF4-209ENST00000544241 FAM193AP78312 1265 aa12.56□□□□□ -0.4
TCF4-209ENST00000544241 U2AF1Q01081 240 aaKnown RBP eCLIP12.56□□□□□ -0.4
TCF4-209ENST00000544241 MED14O60244 1454 aa12.56□□□□□ -0.4
TCF4-209ENST00000544241 NSD2O96028 1365 aa12.56□□□□□ -0.4
TCF4-209ENST00000544241 PREX2Q70Z35 1606 aa12.55□□□□□ -0.4
TCF4-209ENST00000544241 MTHFSP49914 203 aa12.55□□□□□ -0.4
TCF4-209ENST00000544241 USP26Q9BXU7 913 aa12.55□□□□□ -0.4
TCF4-209ENST00000544241 TRPM2O94759 1503 aa12.55□□□□□ -0.4
TCF4-209ENST00000544241 CTIFO43310 598 aaKnown RBP12.55□□□□□ -0.4
TCF4-209ENST00000544241 PKP1Q13835 747 aa12.55□□□□□ -0.4
TCF4-209ENST00000544241 ARHGAP45Q92619 1136 aa12.55□□□□□ -0.4
TCF4-209ENST00000544241 TSR2Q969E8 191 aaKnown RBP12.55□□□□□ -0.4
TCF4-209ENST00000544241 CGNQ9P2M7 1197 aaKnown RBP12.55□□□□□ -0.4
TCF4-209ENST00000544241 SLC20A2Q08357 652 aa12.54□□□□□ -0.4
TCF4-209ENST00000544241 ATP10BO94823 1461 aa12.54□□□□□ -0.4
TCF4-209ENST00000544241 USP32Q8NFA0 1604 aa12.54□□□□□ -0.4
TCF4-209ENST00000544241 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
TCF4-209ENST00000544241 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
TCF4-209ENST00000544241 NEURL4Q96JN8 1562 aa12.54□□□□□ -0.4
TCF4-209ENST00000544241 TAF7LQ5H9L4 462 aa12.53□□□□□ -0.4
TCF4-209ENST00000544241 CREBRFQ8IUR6 639 aa12.53□□□□□ -0.4
TCF4-209ENST00000544241 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
TCF4-209ENST00000544241 ZDHHC9Q9Y397 364 aa12.53□□□□□ -0.4
TCF4-209ENST00000544241 AK9Q5TCS8 1911 aa12.53□□□□□ -0.4
TCF4-209ENST00000544241 ADCY5O95622 1261 aa12.53□□□□□ -0.4
TCF4-209ENST00000544241 PTPRTO14522 1441 aa12.52□□□□□ -0.41
TCF4-209ENST00000544241 ZBTB7BO15156 539 aaPredicted RBP12.52□□□□□ -0.41
TCF4-209ENST00000544241 U2AF2P26368 475 aaKnown RBP eCLIP12.52□□□□□ -0.41
TCF4-209ENST00000544241 INTS4Q96HW7 963 aaKnown RBP12.52□□□□□ -0.41
TCF4-209ENST00000544241 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
TCF4-209ENST00000544241 TSPYL1Q9H0U9 437 aa12.52□□□□□ -0.41
TCF4-209ENST00000544241 MYOM2P54296 1465 aa12.52□□□□□ -0.41
TCF4-209ENST00000544241 BRD1O95696 1058 aa12.51□□□□□ -0.41
TCF4-209ENST00000544241 CCDC183Q5T5S1 534 aa12.51□□□□□ -0.41
TCF4-209ENST00000544241 ZGPATQ8N5A5 531 aaKnown RBP12.51□□□□□ -0.41
TCF4-209ENST00000544241 TSC1Q92574 1164 aa12.51□□□□□ -0.41
TCF4-209ENST00000544241 TRAPPC8Q9Y2L5 1435 aa12.51□□□□□ -0.41
TCF4-209ENST00000544241 SYCP2Q9BX26 1530 aa12.51□□□□□ -0.41
TCF4-209ENST00000544241 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
TCF4-209ENST00000544241 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
TCF4-209ENST00000544241 TMPOP42166 694 aaKnown RBP12.51□□□□□ -0.41
TCF4-209ENST00000544241 TTC22Q5TAA0 569 aa12.51□□□□□ -0.41
TCF4-209ENST00000544241 KIAA1524Q8TCG1 905 aa12.51□□□□□ -0.41
TCF4-209ENST00000544241 TTC12Q9H892 705 aaPredicted RBP12.51□□□□□ -0.41
TCF4-209ENST00000544241 USP25Q9UHP3 1055 aa12.51□□□□□ -0.41
TCF4-209ENST00000544241 MYO3AQ8NEV4 1616 aa12.51□□□□□ -0.41
TCF4-209ENST00000544241 ATAD2Q6PL18 1390 aa12.5□□□□□ -0.41
TCF4-209ENST00000544241 PIK3R4Q99570 1358 aa12.5□□□□□ -0.41
TCF4-209ENST00000544241 TIGD1Q96MW7 591 aa12.5□□□□□ -0.41
TCF4-209ENST00000544241 KDM4AO75164 1064 aa12.5□□□□□ -0.41
TCF4-209ENST00000544241 CALCOCO1Q9P1Z2 691 aa12.5□□□□□ -0.41
TCF4-209ENST00000544241 NSFL1CQ9UNZ2 370 aaKnown RBP12.5□□□□□ -0.41
TCF4-209ENST00000544241 CDC42BPBQ9Y5S2 1711 aa12.49□□□□□ -0.41
TCF4-209ENST00000544241 GSPT1P15170 499 aaKnown RBP12.49□□□□□ -0.41
TCF4-209ENST00000544241 PLEKHM2Q8IWE5 1019 aa12.49□□□□□ -0.41
TCF4-209ENST00000544241 ZNF830Q96NB3 372 aaPredicted RBP12.49□□□□□ -0.41
TCF4-209ENST00000544241 PAXBP1Q9Y5B6 917 aa12.49□□□□□ -0.41
TCF4-209ENST00000544241 ZBTB7CA1YPR0 619 aa12.48□□□□□ -0.41
TCF4-209ENST00000544241 MCCP23508 829 aa12.48□□□□□ -0.41
TCF4-209ENST00000544241 WDR33Q9C0J8 1336 aaKnown RBP12.48□□□□□ -0.41
TCF4-209ENST00000544241 KIF24Q5T7B8 1368 aa12.48□□□□□ -0.41
TCF4-209ENST00000544241 JARID2Q92833 1246 aaPredicted RBP12.48□□□□□ -0.41
TCF4-209ENST00000544241 DNAJC5Q9H3Z4 198 aa12.48□□□□□ -0.41
TCF4-209ENST00000544241 DDX41Q9UJV9 622 aaKnown RBP12.48□□□□□ -0.41
TCF4-209ENST00000544241 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
TCF4-209ENST00000544241 SMTNL1A8MU46 457 aa12.47□□□□□ -0.41
TCF4-209ENST00000544241 ERC2O15083 957 aa12.47□□□□□ -0.41
TCF4-209ENST00000544241 MX1P20591 662 aa12.47□□□□□ -0.41
TCF4-209ENST00000544241 CYB5RLQ6IPT4 315 aa12.47□□□□□ -0.41
TCF4-209ENST00000544241 PUS7Q96PZ0 661 aaKnown RBP12.47□□□□□ -0.41
TCF4-209ENST00000544241 CTNNA3Q9UI47 895 aa12.47□□□□□ -0.41
TCF4-209ENST00000544241 MORC2Q9Y6X9 1032 aaPredicted RBP12.47□□□□□ -0.41
TCF4-209ENST00000544241 PPRC1Q5VV67 1664 aaKnown RBP12.47□□□□□ -0.41
TCF4-209ENST00000544241 ARHGAP5Q13017 1502 aa12.47□□□□□ -0.41
TCF4-209ENST00000544241 PTCH1Q13635 1447 aa12.47□□□□□ -0.41
TCF4-209ENST00000544241 CUL4AQ13619 759 aa12.46□□□□□ -0.41
TCF4-209ENST00000544241 KRT222Q8N1A0 295 aa12.46□□□□□ -0.41
TCF4-209ENST00000544241 TMEM87AQ8NBN3 555 aa12.46□□□□□ -0.41
TCF4-209ENST00000544241 TMX3Q96JJ7 454 aa12.46□□□□□ -0.41
TCF4-209ENST00000544241 PLEKHF1Q96S99 279 aa12.46□□□□□ -0.41
TCF4-209ENST00000544241 ATP6V1DQ9Y5K8 247 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms