RNA–Protein interactions for RNA: ENST00000544154.1

NPIPB3-213, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-213ENST00000544154 SPTLC1O15269 473 aa4.69□□□□□ -1.66
NPIPB3-213ENST00000544154 SPINT1O43278 529 aa4.69□□□□□ -1.66
NPIPB3-213ENST00000544154 DCAF8L2P0C7V8 631 aa4.69□□□□□ -1.66
NPIPB3-213ENST00000544154 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
NPIPB3-213ENST00000544154 GPR25O00155 361 aa4.68□□□□□ -1.66
NPIPB3-213ENST00000544154 HLA-CQ95604 372 aa4.68□□□□□ -1.66
NPIPB3-213ENST00000544154 UNC93B1Q9H1C4 597 aa4.68□□□□□ -1.66
NPIPB3-213ENST00000544154 GATA4P43694 442 aa4.67□□□□□ -1.66
NPIPB3-213ENST00000544154 JAG1P78504 1218 aa4.67□□□□□ -1.66
NPIPB3-213ENST00000544154 E2F4Q16254 413 aa4.66□□□□□ -1.66
NPIPB3-213ENST00000544154 FAM174AQ8TBP5 190 aa4.66□□□□□ -1.66
NPIPB3-213ENST00000544154 ZNF837Q96EG3 531 aaPredicted RBP4.66□□□□□ -1.66
NPIPB3-213ENST00000544154 TPSG1Q9NRR2 321 aa4.66□□□□□ -1.66
NPIPB3-213ENST00000544154 CTSOP43234 321 aaPredicted RBP4.65□□□□□ -1.67
NPIPB3-213ENST00000544154 ARID5BQ14865 1188 aa4.65□□□□□ -1.67
NPIPB3-213ENST00000544154 NLRP7Q8WX94 980 aa4.65□□□□□ -1.67
NPIPB3-213ENST00000544154 SYMPKQ92797 1274 aaKnown RBP4.64□□□□□ -1.67
NPIPB3-213ENST00000544154 CCNYL3P0C7X3 344 aa4.63□□□□□ -1.67
NPIPB3-213ENST00000544154 RRAGCQ9HB90 399 aa4.63□□□□□ -1.67
NPIPB3-213ENST00000544154 EVA1BQ9NVM1 165 aa4.63□□□□□ -1.67
NPIPB3-213ENST00000544154 MLLT3P42568 568 aaPredicted RBP4.62□□□□□ -1.67
NPIPB3-213ENST00000544154 RIC3Q7Z5B4 369 aa4.62□□□□□ -1.67
NPIPB3-213ENST00000544154 OXCT2Q9BYC2 517 aaPredicted RBP4.62□□□□□ -1.67
NPIPB3-213ENST00000544154 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
NPIPB3-213ENST00000544154 CBLBQ13191 982 aa4.61□□□□□ -1.67
NPIPB3-213ENST00000544154 DBN1Q16643 649 aa4.61□□□□□ -1.67
NPIPB3-213ENST00000544154 Q6ZVU0 165 aa4.61□□□□□ -1.67
NPIPB3-213ENST00000544154 SULF1Q8IWU6 871 aa4.61□□□□□ -1.67
NPIPB3-213ENST00000544154 RNF217Q8TC41 542 aa4.61□□□□□ -1.67
NPIPB3-213ENST00000544154 FOXJ1Q92949 421 aa4.61□□□□□ -1.67
NPIPB3-213ENST00000544154 GNB5O14775 395 aa4.6□□□□□ -1.67
NPIPB3-213ENST00000544154 KCNH2Q12809 1159 aa4.59□□□□□ -1.67
NPIPB3-213ENST00000544154 C4orf48Q5BLP8 95 aa4.59□□□□□ -1.67
NPIPB3-213ENST00000544154 TRIM22Q8IYM9 498 aa4.59□□□□□ -1.67
NPIPB3-213ENST00000544154 BBXQ8WY36 941 aaPredicted RBP4.59□□□□□ -1.67
NPIPB3-213ENST00000544154 GUCA2AQ02747 115 aa4.58□□□□□ -1.68
NPIPB3-213ENST00000544154 EDARADDQ8WWZ3 215 aa4.58□□□□□ -1.68
NPIPB3-213ENST00000544154 GMCL1Q96IK5 515 aa4.58□□□□□ -1.68
NPIPB3-213ENST00000544154 INSM2Q96T92 566 aaPredicted RBP4.58□□□□□ -1.68
NPIPB3-213ENST00000544154 MS4A1P11836 297 aa4.57□□□□□ -1.68
NPIPB3-213ENST00000544154 MX2P20592 715 aa4.57□□□□□ -1.68
NPIPB3-213ENST00000544154 PHOX2BQ99453 314 aa4.57□□□□□ -1.68
NPIPB3-213ENST00000544154 NUTM2FA1L443 756 aa4.56□□□□□ -1.68
NPIPB3-213ENST00000544154 KDM4AO75164 1064 aa4.56□□□□□ -1.68
NPIPB3-213ENST00000544154 FCHSD2O94868 740 aa4.56□□□□□ -1.68
NPIPB3-213ENST00000544154 PTPRNQ16849 979 aa4.56□□□□□ -1.68
NPIPB3-213ENST00000544154 GIGYF2Q6Y7W6 1299 aaKnown RBP4.56□□□□□ -1.68
NPIPB3-213ENST00000544154 RETREG3Q86VR2 466 aa4.56□□□□□ -1.68
NPIPB3-213ENST00000544154 SPRYD3Q8NCJ5 442 aa4.56□□□□□ -1.68
NPIPB3-213ENST00000544154 GTPBP3Q969Y2 492 aaKnown RBP4.56□□□□□ -1.68
NPIPB3-213ENST00000544154 WDR70Q9NW82 654 aa4.56□□□□□ -1.68
NPIPB3-213ENST00000544154 RNF114Q9Y508 228 aa4.56□□□□□ -1.68
NPIPB3-213ENST00000544154 EMILIN1Q9Y6C2 1016 aa4.56□□□□□ -1.68
NPIPB3-213ENST00000544154 FOXR1Q6PIV2 292 aa4.55□□□□□ -1.68
NPIPB3-213ENST00000544154 CD46P15529 392 aa4.54□□□□□ -1.68
NPIPB3-213ENST00000544154 FSHRP23945 695 aa4.54□□□□□ -1.68
NPIPB3-213ENST00000544154 DGKGP49619 791 aa4.54□□□□□ -1.68
NPIPB3-213ENST00000544154 FOXD4L5Q5VV16 416 aaPredicted RBP4.54□□□□□ -1.68
NPIPB3-213ENST00000544154 KLRG1Q96E93 195 aa4.54□□□□□ -1.68
NPIPB3-213ENST00000544154 AGBL1Q96MI9 1066 aa4.54□□□□□ -1.68
NPIPB3-213ENST00000544154 HOXA2O43364 376 aa4.53□□□□□ -1.68
NPIPB3-213ENST00000544154 NOP53Q9NZM5 478 aaKnown RBP4.53□□□□□ -1.68
NPIPB3-213ENST00000544154 TAL1P17542 331 aaPredicted RBP4.52□□□□□ -1.69
NPIPB3-213ENST00000544154 MAP2K3P46734 347 aa4.52□□□□□ -1.69
NPIPB3-213ENST00000544154 CCDC116Q8IYX3 515 aa4.52□□□□□ -1.69
NPIPB3-213ENST00000544154 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.52□□□□□ -1.69
NPIPB3-213ENST00000544154 NSFL1CQ9UNZ2 370 aaKnown RBP4.52□□□□□ -1.69
NPIPB3-213ENST00000544154 PIK3R2O00459 728 aa4.51□□□□□ -1.69
NPIPB3-213ENST00000544154 ELNP15502 786 aa4.51□□□□□ -1.69
NPIPB3-213ENST00000544154 BTBD6Q96KE9 485 aa4.51□□□□□ -1.69
NPIPB3-213ENST00000544154 POLMQ9NP87 494 aaPredicted RBP4.51□□□□□ -1.69
NPIPB3-213ENST00000544154 H2AFB1P0C5Y9 115 aa4.49□□□□□ -1.69
NPIPB3-213ENST00000544154 H2AFB2P0C5Z0 115 aa4.49□□□□□ -1.69
NPIPB3-213ENST00000544154 USP46P62068 366 aa4.49□□□□□ -1.69
NPIPB3-213ENST00000544154 RELBQ01201 579 aa4.49□□□□□ -1.69
NPIPB3-213ENST00000544154 PPP1R26Q5T8A7 1209 aaPredicted RBP4.49□□□□□ -1.69
NPIPB3-213ENST00000544154 TRERF1Q96PN7 1200 aa4.49□□□□□ -1.69
NPIPB3-213ENST00000544154 C1QTNF2Q9BXJ5 285 aa4.49□□□□□ -1.69
NPIPB3-213ENST00000544154 GDF2Q9UK05 429 aaPredicted RBP4.49□□□□□ -1.69
NPIPB3-213ENST00000544154 MAP4K5Q9Y4K4 846 aa4.49□□□□□ -1.69
NPIPB3-213ENST00000544154 AMPD1P23109 780 aa4.48□□□□□ -1.69
NPIPB3-213ENST00000544154 PRPF38BQ5VTL8 546 aaKnown RBP4.48□□□□□ -1.69
NPIPB3-213ENST00000544154 PAXIP1Q6ZW49 1069 aaPredicted RBP4.48□□□□□ -1.69
NPIPB3-213ENST00000544154 TRIM11Q96F44 468 aa4.48□□□□□ -1.69
NPIPB3-213ENST00000544154 CFAP44Q96MT7 982 aa4.48□□□□□ -1.69
NPIPB3-213ENST00000544154 ZNF395Q9H8N7 513 aaPredicted RBP4.48□□□□□ -1.69
NPIPB3-213ENST00000544154 SPATA31C1P0DKV0 1188 aa4.47□□□□□ -1.69
NPIPB3-213ENST00000544154 IRAK1P51617 712 aa4.47□□□□□ -1.69
NPIPB3-213ENST00000544154 LYSMD3Q7Z3D4 306 aa4.47□□□□□ -1.69
NPIPB3-213ENST00000544154 TRIM52Q96A61 297 aa4.47□□□□□ -1.69
NPIPB3-213ENST00000544154 RHOQP17081 205 aa4.46□□□□□ -1.7
NPIPB3-213ENST00000544154 RIPOR1Q6ZS17 1223 aa4.46□□□□□ -1.7
NPIPB3-213ENST00000544154 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
NPIPB3-213ENST00000544154 PCDHGC3Q9UN70 934 aa4.46□□□□□ -1.7
NPIPB3-213ENST00000544154 THBS1P07996 1170 aa4.45□□□□□ -1.7
NPIPB3-213ENST00000544154 HIC1Q14526 733 aa4.45□□□□□ -1.7
NPIPB3-213ENST00000544154 VASH1Q7L8A9 365 aaPredicted RBP4.45□□□□□ -1.7
NPIPB3-213ENST00000544154 GOLGA6L1Q8N7Z2 621 aa4.45□□□□□ -1.7
NPIPB3-213ENST00000544154 RNF112Q9ULX5 631 aa4.45□□□□□ -1.7
NPIPB3-213ENST00000544154 SLCO4C1Q6ZQN7 724 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms