RNA–Protein interactions for RNA: ENST00000544050.1

DYRK4-215, Transcript of dual specificity tyrosine phosphorylation regulated kinase 4, human

TSL 2

Gene DYRK4, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DYRK4-215	ENST00000544050	USP35	Q9P2H5	1018 aa		14.36	□□□□□ -0.11
DYRK4-215	ENST00000544050	THRAP3	Q9Y2W1	955 aa	Known RBP	14.36	□□□□□ -0.11
DYRK4-215	ENST00000544050	USP19	O94966	1318 aa		14.36	□□□□□ -0.11
DYRK4-215	ENST00000544050	LMO7	Q8WWI1	1683 aa		14.36	□□□□□ -0.11
DYRK4-215	ENST00000544050	TRIM37	O94972	964 aa		14.35	□□□□□ -0.11
DYRK4-215	ENST00000544050	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	14.35	□□□□□ -0.11
DYRK4-215	ENST00000544050	TCP11L2	Q8N4U5	519 aa		14.35	□□□□□ -0.11
DYRK4-215	ENST00000544050	CAMTA1	Q9Y6Y1	1673 aa		14.35	□□□□□ -0.11
DYRK4-215	ENST00000544050		A0A1W2PP64	1363 aa		14.34	□□□□□ -0.11
DYRK4-215	ENST00000544050	CPSF1	Q10570	1443 aa	Known RBP	14.34	□□□□□ -0.11
DYRK4-215	ENST00000544050	CD163L1	Q9NR16	1453 aa		14.34	□□□□□ -0.11
DYRK4-215	ENST00000544050	GC	P02774	474 aa		14.34	□□□□□ -0.11
DYRK4-215	ENST00000544050	CABP1	Q9NZU7	370 aa		14.34	□□□□□ -0.11
DYRK4-215	ENST00000544050	NSD2	O96028	1365 aa		14.34	□□□□□ -0.11
DYRK4-215	ENST00000544050	NSD3	Q9BZ95	1437 aa		14.33	□□□□□ -0.11
DYRK4-215	ENST00000544050	APBA3	O96018	575 aa		14.33	□□□□□ -0.12
DYRK4-215	ENST00000544050	EZH2	Q15910	746 aa	Known RBP	14.33	□□□□□ -0.12
DYRK4-215	ENST00000544050	LARP1	Q6PKG0	1096 aa	Known RBP	14.33	□□□□□ -0.12
DYRK4-215	ENST00000544050	CAMKK2	Q96RR4	588 aa		14.33	□□□□□ -0.12
DYRK4-215	ENST00000544050	PRKRIP1	Q9H875	184 aa	Predicted RBP	14.33	□□□□□ -0.12
DYRK4-215	ENST00000544050	PARP4	Q9UKK3	1724 aa	Known RBP	14.32	□□□□□ -0.12
DYRK4-215	ENST00000544050	R3HDM1	Q15032	1099 aa	Known RBP	14.32	□□□□□ -0.12
DYRK4-215	ENST00000544050	RALBP1	Q15311	655 aa		14.32	□□□□□ -0.12
DYRK4-215	ENST00000544050	AMER1	Q5JTC6	1135 aa	Predicted RBP	14.32	□□□□□ -0.12
DYRK4-215	ENST00000544050	MIER1	Q8N108	512 aa		14.32	□□□□□ -0.12
DYRK4-215	ENST00000544050	ZNF692	Q9BU19	519 aa	Predicted RBP	14.32	□□□□□ -0.12
DYRK4-215	ENST00000544050	EDC4	Q6P2E9	1401 aa	Known RBP	14.32	□□□□□ -0.12
DYRK4-215	ENST00000544050	CARD14	Q9BXL6	1004 aa		14.31	□□□□□ -0.12
DYRK4-215	ENST00000544050	CGNL1	Q0VF96	1302 aa		14.31	□□□□□ -0.12
DYRK4-215	ENST00000544050	USP6	P35125	1406 aa		14.31	□□□□□ -0.12
DYRK4-215	ENST00000544050	RREB1	Q92766	1687 aa		14.3	□□□□□ -0.12
DYRK4-215	ENST00000544050	AKAP12	Q02952	1782 aa		14.3	□□□□□ -0.12
DYRK4-215	ENST00000544050	CCER2	I3L3R5	266 aa		14.3	□□□□□ -0.12
DYRK4-215	ENST00000544050	NLRP6	P59044	892 aa		14.3	□□□□□ -0.12
DYRK4-215	ENST00000544050	NBPF14	Q5TI25	921 aa		14.3	□□□□□ -0.12
DYRK4-215	ENST00000544050	COL5A2	P05997	1499 aa	Predicted RBP	14.3	□□□□□ -0.12
DYRK4-215	ENST00000544050	MON2	Q7Z3U7	1717 aa		14.29	□□□□□ -0.12
DYRK4-215	ENST00000544050	CRB1	P82279	1406 aa		14.29	□□□□□ -0.12
DYRK4-215	ENST00000544050	SBF2	Q86WG5	1849 aa		14.29	□□□□□ -0.12
DYRK4-215	ENST00000544050	SLIT3	O75094	1523 aa		14.28	□□□□□ -0.12
DYRK4-215	ENST00000544050	NUP188	Q5SRE5	1749 aa		14.28	□□□□□ -0.12
DYRK4-215	ENST00000544050	AATK	Q6ZMQ8	1374 aa		14.28	□□□□□ -0.12
DYRK4-215	ENST00000544050	KAT6B	Q8WYB5	2073 aa		14.28	□□□□□ -0.12
DYRK4-215	ENST00000544050	ZBTB7C	A1YPR0	619 aa		14.27	□□□□□ -0.13
DYRK4-215	ENST00000544050	PIAS4	Q8N2W9	510 aa	Predicted RBP	14.27	□□□□□ -0.13
DYRK4-215	ENST00000544050	COL18A1	P39060	1754 aa		14.27	□□□□□ -0.13
DYRK4-215	ENST00000544050	PIK3C2A	O00443	1686 aa		14.26	□□□□□ -0.13
DYRK4-215	ENST00000544050	MYBBP1A	Q9BQG0	1328 aa	Known RBP	14.26	□□□□□ -0.13
DYRK4-215	ENST00000544050	RGPD3	A6NKT7	1758 aa	Predicted RBP	14.26	□□□□□ -0.13
DYRK4-215	ENST00000544050	RGPD4	Q7Z3J3	1758 aa		14.26	□□□□□ -0.13
DYRK4-215	ENST00000544050	RGPD5	Q99666	1765 aa		14.26	□□□□□ -0.13
DYRK4-215	ENST00000544050	OVOS2	A0A0G2JMS6	1433 aa		14.25	□□□□□ -0.13
DYRK4-215	ENST00000544050	OVOS2	A0A0J9YW53	1432 aa		14.25	□□□□□ -0.13
DYRK4-215	ENST00000544050	OVOS2	Q6IE36	1432 aa		14.25	□□□□□ -0.13
DYRK4-215	ENST00000544050	WNK3	Q9BYP7	1800 aa		14.25	□□□□□ -0.13
DYRK4-215	ENST00000544050	TOM1L2	Q6ZVM7	507 aa		14.25	□□□□□ -0.13
DYRK4-215	ENST00000544050	KCNH5	Q8NCM2	988 aa		14.25	□□□□□ -0.13
DYRK4-215	ENST00000544050	CDCA7	Q9BWT1	371 aa	Predicted RBP	14.25	□□□□□ -0.13
DYRK4-215	ENST00000544050	TTC21A	Q8NDW8	1320 aa		14.24	□□□□□ -0.13
DYRK4-215	ENST00000544050	DDB1	Q16531	1140 aa		14.24	□□□□□ -0.13
DYRK4-215	ENST00000544050	CC2D1B	Q5T0F9	858 aa	Known RBP	14.24	□□□□□ -0.13
DYRK4-215	ENST00000544050	PEAK1	Q9H792	1746 aa		14.24	□□□□□ -0.13
DYRK4-215	ENST00000544050	WDR17	Q8IZU2	1322 aa		14.23	□□□□□ -0.13
DYRK4-215	ENST00000544050	KIF20B	Q96Q89	1820 aa		14.23	□□□□□ -0.13
DYRK4-215	ENST00000544050	ANKRD26	Q9UPS8	1709 aa		14.23	□□□□□ -0.13
DYRK4-215	ENST00000544050	LRRC37A3	O60309	1634 aa		14.23	□□□□□ -0.13
DYRK4-215	ENST00000544050	TTC21B	Q7Z4L5	1316 aa		14.22	□□□□□ -0.13
DYRK4-215	ENST00000544050	FYB1	O15117	783 aa		14.21	□□□□□ -0.13
DYRK4-215	ENST00000544050	PLSCR1	O15162	318 aa		14.21	□□□□□ -0.13
DYRK4-215	ENST00000544050	MORC1	Q86VD1	984 aa		14.21	□□□□□ -0.13
DYRK4-215	ENST00000544050	ARHGEF25	Q86VW2	580 aa		14.21	□□□□□ -0.13
DYRK4-215	ENST00000544050	CSB-PGBD3	P0DP91	1061 aa		14.2	□□□□□ -0.14
DYRK4-215	ENST00000544050	CARD10	Q9BWT7	1032 aa		14.2	□□□□□ -0.14
DYRK4-215	ENST00000544050	BCL11B	Q9C0K0	894 aa	Predicted RBP	14.2	□□□□□ -0.14
DYRK4-215	ENST00000544050	SPON1	Q9HCB6	807 aa		14.19	□□□□□ -0.14
DYRK4-215	ENST00000544050	AXIN2	Q9Y2T1	843 aa		14.19	□□□□□ -0.14
DYRK4-215	ENST00000544050	ABCC6	O95255	1503 aa		14.19	□□□□□ -0.14
DYRK4-215	ENST00000544050	BCL9	O00512	1426 aa		14.18	□□□□□ -0.14
DYRK4-215	ENST00000544050	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	14.18	□□□□□ -0.14
DYRK4-215	ENST00000544050	USP31	Q70CQ4	1352 aa		14.18	□□□□□ -0.14
DYRK4-215	ENST00000544050	USP54	Q70EL1	1684 aa		14.17	□□□□□ -0.14
DYRK4-215	ENST00000544050	KCNQ2	O43526	872 aa		14.17	□□□□□ -0.14
DYRK4-215	ENST00000544050	PPP2R1A	P30153	589 aa		14.17	□□□□□ -0.14
DYRK4-215	ENST00000544050	GGNBP2	Q9H3C7	697 aa		14.17	□□□□□ -0.14
DYRK4-215	ENST00000544050	PPP1R1B	Q9UD71	204 aa	Predicted RBP	14.17	□□□□□ -0.14
DYRK4-215	ENST00000544050	DCAF8L1	A6NGE4	600 aa		14.16	□□□□□ -0.14
DYRK4-215	ENST00000544050	EXOC5	O00471	708 aa		14.16	□□□□□ -0.14
DYRK4-215	ENST00000544050	SOX12	O15370	315 aa		14.16	□□□□□ -0.14
DYRK4-215	ENST00000544050	CNGB1	Q14028	1251 aa	Predicted RBP	14.16	□□□□□ -0.14
DYRK4-215	ENST00000544050	NME9	Q86XW9	330 aa		14.16	□□□□□ -0.14
DYRK4-215	ENST00000544050	MARCH10	Q8NA82	808 aa	Predicted RBP	14.16	□□□□□ -0.14
DYRK4-215	ENST00000544050	COG3	Q96JB2	828 aa		14.16	□□□□□ -0.14
DYRK4-215	ENST00000544050	MRS2	Q9HD23	443 aa		14.16	□□□□□ -0.14
DYRK4-215	ENST00000544050	LTN1	O94822	1766 aa		14.16	□□□□□ -0.14
DYRK4-215	ENST00000544050	NFAT5	O94916	1531 aa		14.15	□□□□□ -0.14
DYRK4-215	ENST00000544050	CASZ1	Q86V15	1759 aa		14.12	□□□□□ -0.15
DYRK4-215	ENST00000544050	SMG6	Q86US8	1419 aa	Known RBP	14.12	□□□□□ -0.15
DYRK4-215	ENST00000544050	TNS2	Q63HR2	1409 aa		14.11	□□□□□ -0.15
DYRK4-215	ENST00000544050	PTF1A	Q7RTS3	328 aa		14.1	□□□□□ -0.15
DYRK4-215	ENST00000544050	PROM2	Q8N271	834 aa		14.1	□□□□□ -0.15

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