RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 CARD14Q9BXL6 1004 aa11.28□□□□□ -0.6
SMCO2-206ENST00000543991 GZF1Q9H116 711 aaPredicted RBP11.28□□□□□ -0.6
SMCO2-206ENST00000543991 FCF1Q9Y324 198 aaKnown RBP11.28□□□□□ -0.6
SMCO2-206ENST00000543991 UNC13AQ9UPW8 1703 aa11.28□□□□□ -0.6
SMCO2-206ENST00000543991 MAGEB6P1A0A0J9YX57 407 aa11.27□□□□□ -0.61
SMCO2-206ENST00000543991 FAM196BA6NMK8 535 aa11.27□□□□□ -0.61
SMCO2-206ENST00000543991 NCOA4Q13772 614 aa11.27□□□□□ -0.61
SMCO2-206ENST00000543991 NOVA2Q9UNW9 492 aaKnown RBP11.27□□□□□ -0.61
SMCO2-206ENST00000543991 ATP5J2-PTCD1G3V325 749 aa11.26□□□□□ -0.61
SMCO2-206ENST00000543991 AGERQ15109 404 aa11.26□□□□□ -0.61
SMCO2-206ENST00000543991 ZNF511Q8NB15 262 aa11.26□□□□□ -0.61
SMCO2-206ENST00000543991 ZMIZ1Q9ULJ6 1067 aa11.26□□□□□ -0.61
SMCO2-206ENST00000543991 LINC01559Q495D7 138 aa11.25□□□□□ -0.61
SMCO2-206ENST00000543991 LARP1Q6PKG0 1096 aaKnown RBP11.25□□□□□ -0.61
SMCO2-206ENST00000543991 FOXJ1Q92949 421 aa11.25□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L15C9J2P7 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L10C9JJH3 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L13C9JLJ4 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L12C9JPN9 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L11C9JVI0 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L21D6R901 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L18D6R9N7 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L22D6RA61 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L17D6RBQ6 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L19D6RCP7 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L20D6RJB6 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 RASA1P20936 1047 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 USP17L24Q0WX57 530 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 EML3Q32P44 896 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 ERFEQ4G0M1 354 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 TMEM164Q5U3C3 297 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 TRAF7Q6Q0C0 670 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 STK32AQ8WU08 396 aa11.24□□□□□ -0.61
SMCO2-206ENST00000543991 CRTC2Q53ET0 693 aaPredicted RBP11.23□□□□□ -0.61
SMCO2-206ENST00000543991 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
SMCO2-206ENST00000543991 SHROOM4Q9ULL8 1493 aa11.23□□□□□ -0.61
SMCO2-206ENST00000543991 PTK7Q13308 1070 aa11.22□□□□□ -0.61
SMCO2-206ENST00000543991 TSGA10IPQ3SY00 556 aa11.22□□□□□ -0.61
SMCO2-206ENST00000543991 C4orf48Q5BLP8 95 aa11.22□□□□□ -0.61
SMCO2-206ENST00000543991 TMCO4Q5TGY1 634 aa11.22□□□□□ -0.61
SMCO2-206ENST00000543991 B4GALNT3Q6L9W6 998 aa11.22□□□□□ -0.61
SMCO2-206ENST00000543991 GIGYF1O75420 1035 aaPredicted RBP11.21□□□□□ -0.61
SMCO2-206ENST00000543991 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
SMCO2-206ENST00000543991 TRIM50Q86XT4 487 aa11.21□□□□□ -0.61
SMCO2-206ENST00000543991 SLC10A4Q96EP9 437 aa11.21□□□□□ -0.61
SMCO2-206ENST00000543991 CCDC85AQ96PX6 553 aaPredicted RBP11.21□□□□□ -0.61
SMCO2-206ENST00000543991 C1QTNF2Q9BXJ5 285 aa11.21□□□□□ -0.61
SMCO2-206ENST00000543991 DOLKQ9UPQ8 538 aa11.21□□□□□ -0.61
SMCO2-206ENST00000543991 FAM200AQ8TCP9 573 aa11.2□□□□□ -0.62
SMCO2-206ENST00000543991 CDCA7Q9BWT1 371 aaPredicted RBP11.2□□□□□ -0.62
SMCO2-206ENST00000543991 NOD1Q9Y239 953 aa11.2□□□□□ -0.62
SMCO2-206ENST00000543991 SH3BP2P78314 561 aa11.19□□□□□ -0.62
SMCO2-206ENST00000543991 OGFOD1Q8N543 542 aa11.19□□□□□ -0.62
SMCO2-206ENST00000543991 ATP1A2P50993 1020 aa11.18□□□□□ -0.62
SMCO2-206ENST00000543991 KCNC4Q03721 635 aa11.18□□□□□ -0.62
SMCO2-206ENST00000543991 NBPF20Q3BBV1 942 aa11.18□□□□□ -0.62
SMCO2-206ENST00000543991 ANKMY2Q8IV38 441 aa11.18□□□□□ -0.62
SMCO2-206ENST00000543991 TRMT44Q8IYL2 757 aaKnown RBP11.18□□□□□ -0.62
SMCO2-206ENST00000543991 CDV3Q9UKY7 258 aaKnown RBP11.18□□□□□ -0.62
SMCO2-206ENST00000543991 PPEF1O14829 653 aaPredicted RBP11.17□□□□□ -0.62
SMCO2-206ENST00000543991 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
SMCO2-206ENST00000543991 CCDC125Q86Z20 511 aa11.17□□□□□ -0.62
SMCO2-206ENST00000543991 DNAAF2Q9NVR5 837 aaKnown RBP11.17□□□□□ -0.62
SMCO2-206ENST00000543991 HCSTQ9UBK5 93 aa11.17□□□□□ -0.62
SMCO2-206ENST00000543991 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
SMCO2-206ENST00000543991 CUX2O14529 1486 aa11.17□□□□□ -0.62
SMCO2-206ENST00000543991 ESPNB1AK53 854 aa11.16□□□□□ -0.62
SMCO2-206ENST00000543991 ITGBL1O95965 494 aaPredicted RBP11.16□□□□□ -0.62
SMCO2-206ENST00000543991 CLDN10P78369 228 aa11.16□□□□□ -0.62
SMCO2-206ENST00000543991 OXLD1Q5BKU9 147 aa11.16□□□□□ -0.62
SMCO2-206ENST00000543991 FAM69CQ0P6D2 419 aa11.15□□□□□ -0.62
SMCO2-206ENST00000543991 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
SMCO2-206ENST00000543991 SEPT12Q8IYM1 358 aa11.15□□□□□ -0.62
SMCO2-206ENST00000543991 LARGE2Q8N3Y3 721 aa11.15□□□□□ -0.62
SMCO2-206ENST00000543991 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
SMCO2-206ENST00000543991 RNF223E7ERA6 249 aa11.14□□□□□ -0.63
SMCO2-206ENST00000543991 GGCXP38435 758 aa11.14□□□□□ -0.63
SMCO2-206ENST00000543991 MFAP1P55081 439 aaKnown RBP11.14□□□□□ -0.63
SMCO2-206ENST00000543991 DPYDQ12882 1025 aa11.14□□□□□ -0.63
SMCO2-206ENST00000543991 ANKLE1Q8NAG6 615 aa11.14□□□□□ -0.63
SMCO2-206ENST00000543991 CLP1Q92989 425 aaKnown RBP11.14□□□□□ -0.63
SMCO2-206ENST00000543991 ZNF594Q96JF6 807 aaPredicted RBP11.14□□□□□ -0.63
SMCO2-206ENST00000543991 GNEQ9Y223 722 aaKnown RBP11.14□□□□□ -0.63
SMCO2-206ENST00000543991 MYO15BQ96JP2 1530 aa11.14□□□□□ -0.63
SMCO2-206ENST00000543991 EIF4G1Q04637 1599 aaKnown RBP11.13□□□□□ -0.63
SMCO2-206ENST00000543991 TRIM32Q13049 653 aa11.13□□□□□ -0.63
SMCO2-206ENST00000543991 SIRT1Q96EB6 747 aa11.13□□□□□ -0.63
SMCO2-206ENST00000543991 ZBTB7BO15156 539 aaPredicted RBP11.12□□□□□ -0.63
SMCO2-206ENST00000543991 WNT7BP56706 349 aa11.12□□□□□ -0.63
SMCO2-206ENST00000543991 GTF2IP78347 998 aa11.12□□□□□ -0.63
SMCO2-206ENST00000543991 SWI5Q1ZZU3 235 aa11.12□□□□□ -0.63
SMCO2-206ENST00000543991 PHLDB3Q6NSJ2 640 aa11.12□□□□□ -0.63
SMCO2-206ENST00000543991 SIX5Q8N196 739 aa11.12□□□□□ -0.63
SMCO2-206ENST00000543991 PCDHB11Q9Y5F2 797 aa11.12□□□□□ -0.63
SMCO2-206ENST00000543991 VARSP26640 1264 aaKnown RBP11.11□□□□□ -0.63
SMCO2-206ENST00000543991 SSFA2P28290 1259 aa11.11□□□□□ -0.63
SMCO2-206ENST00000543991 USP4Q13107 963 aa11.11□□□□□ -0.63
SMCO2-206ENST00000543991 SLAIN2Q9P270 581 aa11.11□□□□□ -0.63
SMCO2-206ENST00000543991 DKK1O94907 266 aa11.1□□□□□ -0.63
SMCO2-206ENST00000543991 RANGAP1P46060 587 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms