RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 CRB1P82279 1406 aa15.73■□□□□ 0.11
COPS7A-217ENST00000543537 EDC4Q6P2E9 1401 aaKnown RBP15.73■□□□□ 0.11
COPS7A-217ENST00000543537 A0A0G2JS52 829 aa15.72■□□□□ 0.11
COPS7A-217ENST00000543537 MYT1Q01538 1121 aa15.72■□□□□ 0.11
COPS7A-217ENST00000543537 SF3B2Q13435 895 aaKnown RBP15.72■□□□□ 0.11
COPS7A-217ENST00000543537 SLC12A5Q9H2X9 1139 aa15.72■□□□□ 0.11
COPS7A-217ENST00000543537 WASHC2AQ641Q2 1341 aa15.71■□□□□ 0.11
COPS7A-217ENST00000543537 HDGFL2Q7Z4V5 671 aaPredicted RBP15.71■□□□□ 0.11
COPS7A-217ENST00000543537 TERF2IPQ9NYB0 399 aa15.71■□□□□ 0.11
COPS7A-217ENST00000543537 TMF1P82094 1093 aa15.7■□□□□ 0.1
COPS7A-217ENST00000543537 FAM196AQ6ZSG2 479 aa15.7■□□□□ 0.1
COPS7A-217ENST00000543537 DEFB132Q7Z7B7 95 aa15.7■□□□□ 0.1
COPS7A-217ENST00000543537 ZRANB1Q9UGI0 708 aa15.7■□□□□ 0.1
COPS7A-217ENST00000543537 AXIN2Q9Y2T1 843 aa15.7■□□□□ 0.1
COPS7A-217ENST00000543537 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
COPS7A-217ENST00000543537 A0A1W2PP64 1363 aa15.7■□□□□ 0.1
COPS7A-217ENST00000543537 WDR17Q8IZU2 1322 aa15.69■□□□□ 0.1
COPS7A-217ENST00000543537 OVOS2A0A0J9YW53 1432 aa15.68■□□□□ 0.1
COPS7A-217ENST00000543537 OVOS2Q6IE36 1432 aa15.68■□□□□ 0.1
COPS7A-217ENST00000543537 RGPD1P0DJD0 1748 aa15.68■□□□□ 0.1
COPS7A-217ENST00000543537 PARP4Q9UKK3 1724 aaKnown RBP15.68■□□□□ 0.1
COPS7A-217ENST00000543537 C11orf95C9JLR9 678 aaPredicted RBP15.68■□□□□ 0.1
COPS7A-217ENST00000543537 BAG6P46379 1132 aa15.68■□□□□ 0.1
COPS7A-217ENST00000543537 TMC1Q8TDI8 760 aa15.68■□□□□ 0.1
COPS7A-217ENST00000543537 USP35Q9P2H5 1018 aa15.68■□□□□ 0.1
COPS7A-217ENST00000543537 KIF7Q2M1P5 1343 aa15.67■□□□□ 0.1
COPS7A-217ENST00000543537 NME9Q86XW9 330 aa15.66■□□□□ 0.1
COPS7A-217ENST00000543537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.66■□□□□ 0.1
COPS7A-217ENST00000543537 CDCA7Q9BWT1 371 aaPredicted RBP15.66■□□□□ 0.1
COPS7A-217ENST00000543537 CARD10Q9BWT7 1032 aa15.66■□□□□ 0.1
COPS7A-217ENST00000543537 TNS1Q9HBL0 1735 aaKnown RBP15.65■□□□□ 0.1
COPS7A-217ENST00000543537 ANKRD36BQ8N2N9 1353 aa15.65■□□□□ 0.1
COPS7A-217ENST00000543537 PDE3BQ13370 1112 aa15.65■□□□□ 0.1
COPS7A-217ENST00000543537 FAM182BQ5T319 152 aa15.65■□□□□ 0.1
COPS7A-217ENST00000543537 BCL9O00512 1426 aa15.65■□□□□ 0.1
COPS7A-217ENST00000543537 PARD3Q8TEW0 1356 aa15.64■□□□□ 0.09
COPS7A-217ENST00000543537 TOM1L2Q6ZVM7 507 aa15.64■□□□□ 0.09
COPS7A-217ENST00000543537 PEAK1Q9H792 1746 aa15.63■□□□□ 0.09
COPS7A-217ENST00000543537 ERBB3P21860 1342 aa15.62■□□□□ 0.09
COPS7A-217ENST00000543537 LRRC37A3O60309 1634 aa15.61■□□□□ 0.09
COPS7A-217ENST00000543537 ZBTB7CA1YPR0 619 aa15.61■□□□□ 0.09
COPS7A-217ENST00000543537 CAMKK2Q96RR4 588 aa15.61■□□□□ 0.09
COPS7A-217ENST00000543537 RGPD5Q99666 1765 aa15.61■□□□□ 0.09
COPS7A-217ENST00000543537 WNK3Q9BYP7 1800 aa15.61■□□□□ 0.09
COPS7A-217ENST00000543537 OVOS2A0A0G2JMS6 1433 aa15.6■□□□□ 0.09
COPS7A-217ENST00000543537 SOX12O15370 315 aa15.6■□□□□ 0.09
COPS7A-217ENST00000543537 TRIM37O94972 964 aa15.6■□□□□ 0.09
COPS7A-217ENST00000543537 EN1Q05925 392 aaPredicted RBP15.6■□□□□ 0.09
COPS7A-217ENST00000543537 DDB1Q16531 1140 aa15.6■□□□□ 0.09
COPS7A-217ENST00000543537 LTN1O94822 1766 aa15.58■□□□□ 0.08
COPS7A-217ENST00000543537 IP6K1Q92551 441 aa15.58■□□□□ 0.08
COPS7A-217ENST00000543537 CSB-PGBD3P0DP91 1061 aa15.57■□□□□ 0.08
COPS7A-217ENST00000543537 COG3Q96JB2 828 aa15.57■□□□□ 0.08
COPS7A-217ENST00000543537 FYB1O15117 783 aa15.56■□□□□ 0.08
COPS7A-217ENST00000543537 APBA3O96018 575 aa15.56■□□□□ 0.08
COPS7A-217ENST00000543537 RALBP1Q15311 655 aa15.56■□□□□ 0.08
COPS7A-217ENST00000543537 EZH2Q15910 746 aaKnown RBP15.56■□□□□ 0.08
COPS7A-217ENST00000543537 TNS2Q63HR2 1409 aa15.56■□□□□ 0.08
COPS7A-217ENST00000543537 PLSCR1O15162 318 aa15.55■□□□□ 0.08
COPS7A-217ENST00000543537 MARCH10Q8NA82 808 aaPredicted RBP15.55■□□□□ 0.08
COPS7A-217ENST00000543537 RGPD3A6NKT7 1758 aaPredicted RBP15.54■□□□□ 0.08
COPS7A-217ENST00000543537 RGPD4Q7Z3J3 1758 aa15.54■□□□□ 0.08
COPS7A-217ENST00000543537 RREB1Q92766 1687 aa15.54■□□□□ 0.08
COPS7A-217ENST00000543537 MAP3K19Q56UN5 1328 aa15.54■□□□□ 0.08
COPS7A-217ENST00000543537 ANKRD24Q8TF21 1146 aa15.54■□□□□ 0.08
COPS7A-217ENST00000543537 BCL11BQ9C0K0 894 aaPredicted RBP15.54■□□□□ 0.08
COPS7A-217ENST00000543537 PRKRIP1Q9H875 184 aaPredicted RBP15.54■□□□□ 0.08
COPS7A-217ENST00000543537 SBF2Q86WG5 1849 aa15.54■□□□□ 0.08
COPS7A-217ENST00000543537 RTL1A6NKG5 1358 aa15.53■□□□□ 0.08
COPS7A-217ENST00000543537 EXOC5O00471 708 aa15.53■□□□□ 0.08
COPS7A-217ENST00000543537 MYOM1P52179 1685 aa15.53■□□□□ 0.08
COPS7A-217ENST00000543537 LRP5O75197 1615 aa15.53■□□□□ 0.08
COPS7A-217ENST00000543537 KIF24Q5T7B8 1368 aa15.52■□□□□ 0.08
COPS7A-217ENST00000543537 FAM208AQ9UK61 1670 aaKnown RBP15.52■□□□□ 0.08
COPS7A-217ENST00000543537 IL2RBP14784 551 aa15.51■□□□□ 0.07
COPS7A-217ENST00000543537 HOXC9P31274 260 aa15.51■□□□□ 0.07
COPS7A-217ENST00000543537 CARD14Q9BXL6 1004 aa15.51■□□□□ 0.07
COPS7A-217ENST00000543537 NLRP2Q9NX02 1062 aa15.51■□□□□ 0.07
COPS7A-217ENST00000543537 NUP188Q5SRE5 1749 aa15.49■□□□□ 0.07
COPS7A-217ENST00000543537 POLR3GLQ9BT43 218 aa15.49■□□□□ 0.07
COPS7A-217ENST00000543537 GGNBP2Q9H3C7 697 aa15.49■□□□□ 0.07
COPS7A-217ENST00000543537 NPC1L1Q9UHC9 1359 aa15.48■□□□□ 0.07
COPS7A-217ENST00000543537 PSDA5PKW4 1024 aaPredicted RBP15.47■□□□□ 0.07
COPS7A-217ENST00000543537 FBLN1P23142 703 aa15.47■□□□□ 0.07
COPS7A-217ENST00000543537 AMPHP49418 695 aa15.47■□□□□ 0.07
COPS7A-217ENST00000543537 R3HDM1Q15032 1099 aaKnown RBP15.47■□□□□ 0.07
COPS7A-217ENST00000543537 NSD3Q9BZ95 1437 aa15.47■□□□□ 0.07
COPS7A-217ENST00000543537 KIF20BQ96Q89 1820 aa15.47■□□□□ 0.07
COPS7A-217ENST00000543537 PTF1AQ7RTS3 328 aa15.46■□□□□ 0.07
COPS7A-217ENST00000543537 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
COPS7A-217ENST00000543537 INSRP06213 1382 aa15.46■□□□□ 0.07
COPS7A-217ENST00000543537 RRS1Q15050 365 aaKnown RBP15.45■□□□□ 0.06
COPS7A-217ENST00000543537 NBPF14Q5TI25 921 aa15.45■□□□□ 0.06
COPS7A-217ENST00000543537 PROM2Q8N271 834 aa15.45■□□□□ 0.06
COPS7A-217ENST00000543537 FLT4P35916 1363 aa15.45■□□□□ 0.06
COPS7A-217ENST00000543537 NHSQ6T4R5 1651 aa15.44■□□□□ 0.06
COPS7A-217ENST00000543537 CGNL1Q0VF96 1302 aa15.43■□□□□ 0.06
COPS7A-217ENST00000543537 PER1O15534 1290 aaPredicted RBP15.43■□□□□ 0.06
COPS7A-217ENST00000543537 MYBBP1AQ9BQG0 1328 aaKnown RBP15.43■□□□□ 0.06
COPS7A-217ENST00000543537 PANK3Q9H999 370 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms