RNA–Protein interactions for RNA: ENST00000543187.5

C1S-220, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-220ENST00000543187 SBNO2Q9Y2G9 1366 aa22.43■■□□□ 1.18
C1S-220ENST00000543187 WDR17Q8IZU2 1322 aa22.43■■□□□ 1.18
C1S-220ENST00000543187 DDB1Q16531 1140 aa22.43■■□□□ 1.18
C1S-220ENST00000543187 MON2Q7Z3U7 1717 aa22.43■■□□□ 1.18
C1S-220ENST00000543187 LRRC37A3O60309 1634 aa22.42■■□□□ 1.18
C1S-220ENST00000543187 WNK3Q9BYP7 1800 aa22.42■■□□□ 1.18
C1S-220ENST00000543187 OVOS2A0A0G2JMS6 1433 aa22.41■■□□□ 1.18
C1S-220ENST00000543187 OVOS2A0A0J9YW53 1432 aa22.41■■□□□ 1.18
C1S-220ENST00000543187 OVOS2Q6IE36 1432 aa22.41■■□□□ 1.18
C1S-220ENST00000543187 SBF2Q86WG5 1849 aa22.41■■□□□ 1.18
C1S-220ENST00000543187 NUP188Q5SRE5 1749 aa22.41■■□□□ 1.18
C1S-220ENST00000543187 PEAK1Q9H792 1746 aa22.4■■□□□ 1.18
C1S-220ENST00000543187 TONSLQ96HA7 1378 aa22.39■■□□□ 1.18
C1S-220ENST00000543187 CSB-PGBD3P0DP91 1061 aa22.39■■□□□ 1.17
C1S-220ENST00000543187 NBPF14Q5TI25 921 aa22.39■■□□□ 1.17
C1S-220ENST00000543187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.38■■□□□ 1.17
C1S-220ENST00000543187 CDCA7Q9BWT1 371 aaPredicted RBP22.38■■□□□ 1.17
C1S-220ENST00000543187 NFAT5O94916 1531 aa22.37■■□□□ 1.17
C1S-220ENST00000543187 TMC1Q8TDI8 760 aa22.37■■□□□ 1.17
C1S-220ENST00000543187 CARD10Q9BWT7 1032 aa22.37■■□□□ 1.17
C1S-220ENST00000543187 CD163L1Q9NR16 1453 aa22.34■■□□□ 1.17
C1S-220ENST00000543187 USP31Q70CQ4 1352 aa22.34■■□□□ 1.17
C1S-220ENST00000543187 HDGFL2Q7Z4V5 671 aaPredicted RBP22.33■■□□□ 1.17
C1S-220ENST00000543187 NME9Q86XW9 330 aa22.33■■□□□ 1.17
C1S-220ENST00000543187 MARCH10Q8NA82 808 aaPredicted RBP22.33■■□□□ 1.17
C1S-220ENST00000543187 SLC12A5Q9H2X9 1139 aa22.33■■□□□ 1.17
C1S-220ENST00000543187 USP54Q70EL1 1684 aa22.33■■□□□ 1.16
C1S-220ENST00000543187 RGPD3A6NKT7 1758 aaPredicted RBP22.33■■□□□ 1.16
C1S-220ENST00000543187 RGPD4Q7Z3J3 1758 aa22.33■■□□□ 1.16
C1S-220ENST00000543187 ABCC6O95255 1503 aa22.32■■□□□ 1.16
C1S-220ENST00000543187 PLSCR1O15162 318 aa22.32■■□□□ 1.16
C1S-220ENST00000543187 BCL11BQ9C0K0 894 aaPredicted RBP22.32■■□□□ 1.16
C1S-220ENST00000543187 LTN1O94822 1766 aa22.31■■□□□ 1.16
C1S-220ENST00000543187 CCDC7Q96M83 1385 aa22.31■■□□□ 1.16
C1S-220ENST00000543187 EXOC5O00471 708 aa22.31■■□□□ 1.16
C1S-220ENST00000543187 PTF1AQ7RTS3 328 aa22.29■■□□□ 1.16
C1S-220ENST00000543187 TERF2IPQ9NYB0 399 aa22.29■■□□□ 1.16
C1S-220ENST00000543187 BCL9O00512 1426 aa22.29■■□□□ 1.16
C1S-220ENST00000543187 PUS7Q96PZ0 661 aaKnown RBP22.28■■□□□ 1.16
C1S-220ENST00000543187 EDC4Q6P2E9 1401 aaKnown RBP22.28■■□□□ 1.16
C1S-220ENST00000543187 A0A1W2PP64 1363 aa22.26■■□□□ 1.15
C1S-220ENST00000543187 ERBB3P21860 1342 aa22.26■■□□□ 1.15
C1S-220ENST00000543187 NLRP2Q9NX02 1062 aa22.25■■□□□ 1.15
C1S-220ENST00000543187 TNS2Q63HR2 1409 aa22.23■■□□□ 1.15
C1S-220ENST00000543187 ST20-MTHFSA0A0A6YYL1 179 aa22.23■■□□□ 1.15
C1S-220ENST00000543187 SPON1Q9HCB6 807 aa22.23■■□□□ 1.15
C1S-220ENST00000543187 KCNQ2O43526 872 aa22.22■■□□□ 1.15
C1S-220ENST00000543187 PROM2Q8N271 834 aa22.22■■□□□ 1.15
C1S-220ENST00000543187 ANKRD24Q8TF21 1146 aa22.22■■□□□ 1.15
C1S-220ENST00000543187 TESK2Q96S53 571 aa22.22■■□□□ 1.15
C1S-220ENST00000543187 KAT6BQ8WYB5 2073 aa22.21■■□□□ 1.15
C1S-220ENST00000543187 IL2RBP14784 551 aa22.21■■□□□ 1.15
C1S-220ENST00000543187 ANO8Q9HCE9 1232 aaPredicted RBP22.21■■□□□ 1.15
C1S-220ENST00000543187 SLC24A1O60721 1099 aa22.2■■□□□ 1.14
C1S-220ENST00000543187 NINLQ9Y2I6 1382 aa22.2■■□□□ 1.14
C1S-220ENST00000543187 PPP1R1BQ9UD71 204 aaPredicted RBP22.19■■□□□ 1.14
C1S-220ENST00000543187 TXNRD1Q16881 649 aa22.18■■□□□ 1.14
C1S-220ENST00000543187 NHSQ6T4R5 1651 aa22.17■■□□□ 1.14
C1S-220ENST00000543187 TRIM26Q12899 539 aaPredicted RBP22.17■■□□□ 1.14
C1S-220ENST00000543187 IP6K1Q92551 441 aa22.17■■□□□ 1.14
C1S-220ENST00000543187 ACSBG1Q96GR2 724 aa22.17■■□□□ 1.14
C1S-220ENST00000543187 CASZ1Q86V15 1759 aa22.17■■□□□ 1.14
C1S-220ENST00000543187 COG3Q96JB2 828 aa22.16■■□□□ 1.14
C1S-220ENST00000543187 LTV1Q96GA3 475 aaPredicted RBP22.14■■□□□ 1.13
C1S-220ENST00000543187 STK32BQ9NY57 414 aa22.14■■□□□ 1.13
C1S-220ENST00000543187 FAM208AQ9UK61 1670 aaKnown RBP22.14■■□□□ 1.13
C1S-220ENST00000543187 PDGFDQ9GZP0 370 aaPredicted RBP22.13■■□□□ 1.13
C1S-220ENST00000543187 SLC15A2Q16348 729 aa22.12■■□□□ 1.13
C1S-220ENST00000543187 BTAF1O14981 1849 aa22.11■■□□□ 1.13
C1S-220ENST00000543187 TMF1P82094 1093 aa22.11■■□□□ 1.13
C1S-220ENST00000543187 ANKRD36BQ8N2N9 1353 aa22.11■■□□□ 1.13
C1S-220ENST00000543187 MAP3K19Q56UN5 1328 aa22.1■■□□□ 1.13
C1S-220ENST00000543187 FBLN1P23142 703 aa22.1■■□□□ 1.13
C1S-220ENST00000543187 AMPHP49418 695 aa22.1■■□□□ 1.13
C1S-220ENST00000543187 ZBTB7AO95365 584 aa22.09■■□□□ 1.13
C1S-220ENST00000543187 HOXC9P31274 260 aa22.09■■□□□ 1.13
C1S-220ENST00000543187 USP47Q96K76 1375 aa22.09■■□□□ 1.13
C1S-220ENST00000543187 RGPD2P0DJD1 1756 aa22.08■■□□□ 1.13
C1S-220ENST00000543187 DDX54Q8TDD1 881 aaKnown RBP22.08■■□□□ 1.13
C1S-220ENST00000543187 DCAF8L1A6NGE4 600 aa22.06■■□□□ 1.12
C1S-220ENST00000543187 ATF5Q9Y2D1 282 aaPredicted RBP22.06■■□□□ 1.12
C1S-220ENST00000543187 FYB1O15117 783 aa22.05■■□□□ 1.12
C1S-220ENST00000543187 GGNBP2Q9H3C7 697 aa22.04■■□□□ 1.12
C1S-220ENST00000543187 PAPPAQ13219 1627 aa22.03■■□□□ 1.12
C1S-220ENST00000543187 PTGER2P43116 358 aa22.03■■□□□ 1.12
C1S-220ENST00000543187 RRS1Q15050 365 aaKnown RBP22.03■■□□□ 1.12
C1S-220ENST00000543187 CDCA8Q53HL2 280 aa22.03■■□□□ 1.12
C1S-220ENST00000543187 MYOM1P52179 1685 aa22.03■■□□□ 1.12
C1S-220ENST00000543187 RTL1A6NKG5 1358 aa22.02■■□□□ 1.12
C1S-220ENST00000543187 MTFR1LQ9H019 292 aa22.01■■□□□ 1.11
C1S-220ENST00000543187 KIF20BQ96Q89 1820 aa22.01■■□□□ 1.11
C1S-220ENST00000543187 YY1P25490 414 aa22■■□□□ 1.11
C1S-220ENST00000543187 SYTL4Q96C24 671 aaPredicted RBP22■■□□□ 1.11
C1S-220ENST00000543187 LRRC4BQ9NT99 713 aa22■■□□□ 1.11
C1S-220ENST00000543187 SHANK3Q9BYB0 1731 aa22■■□□□ 1.11
C1S-220ENST00000543187 ZCRB1Q8TBF4 217 aaKnown RBP21.99■■□□□ 1.11
C1S-220ENST00000543187 DOT1LQ8TEK3 1739 aa21.99■■□□□ 1.11
C1S-220ENST00000543187 MEGF6O75095 1541 aa21.98■■□□□ 1.11
C1S-220ENST00000543187 ZNF827Q17R98 1081 aa21.98■■□□□ 1.11
C1S-220ENST00000543187 NBPF6Q5VWK0 638 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms