RNA–Protein interactions for RNA: ENST00000543058.1

MRPL48-211, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-211ENST00000543058 PROCA1Q8NCQ7 364 aaPredicted RBP6.97□□□□□ -1.29
MRPL48-211ENST00000543058 LRRN4Q8WUT4 740 aa6.97□□□□□ -1.29
MRPL48-211ENST00000543058 OCSTAMPQ9BR26 566 aa6.97□□□□□ -1.29
MRPL48-211ENST00000543058 CDV3Q9UKY7 258 aaKnown RBP6.97□□□□□ -1.29
MRPL48-211ENST00000543058 EMILIN1Q9Y6C2 1016 aa6.97□□□□□ -1.29
MRPL48-211ENST00000543058 VASH1Q7L8A9 365 aaPredicted RBP6.96□□□□□ -1.3
MRPL48-211ENST00000543058 CCDC116Q8IYX3 515 aa6.96□□□□□ -1.3
MRPL48-211ENST00000543058 LINC00528Q8N1L1 170 aa6.96□□□□□ -1.3
MRPL48-211ENST00000543058 ERBB4Q15303 1308 aa6.96□□□□□ -1.3
MRPL48-211ENST00000543058 GMPRP36959 345 aa6.95□□□□□ -1.3
MRPL48-211ENST00000543058 Q6ZVU0 165 aa6.95□□□□□ -1.3
MRPL48-211ENST00000543058 SOS2Q07890 1332 aaPredicted RBP6.95□□□□□ -1.3
MRPL48-211ENST00000543058 MAGEB6P1A0A0J9YX57 407 aa6.94□□□□□ -1.3
MRPL48-211ENST00000543058 C14orf37Q86TY3 774 aa6.94□□□□□ -1.3
MRPL48-211ENST00000543058 ARHGAP9Q9BRR9 750 aa6.94□□□□□ -1.3
MRPL48-211ENST00000543058 NR6A1Q15406 480 aa6.93□□□□□ -1.3
MRPL48-211ENST00000543058 TSEN34Q9BSV6 310 aaKnown RBP6.93□□□□□ -1.3
MRPL48-211ENST00000543058 PPP1R26Q5T8A7 1209 aaPredicted RBP6.92□□□□□ -1.3
MRPL48-211ENST00000543058 CARD14Q9BXL6 1004 aa6.92□□□□□ -1.3
MRPL48-211ENST00000543058 SOBPA7XYQ1 873 aa6.91□□□□□ -1.3
MRPL48-211ENST00000543058 UPP2O95045 317 aa6.91□□□□□ -1.3
MRPL48-211ENST00000543058 PTK2Q05397 1052 aa6.91□□□□□ -1.3
MRPL48-211ENST00000543058 SLC10A4Q96EP9 437 aa6.91□□□□□ -1.3
MRPL48-211ENST00000543058 KCTD15Q96SI1 283 aaPredicted RBP6.91□□□□□ -1.3
MRPL48-211ENST00000543058 HMX1Q9NP08 348 aaPredicted RBP6.91□□□□□ -1.3
MRPL48-211ENST00000543058 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
MRPL48-211ENST00000543058 DNMT3LQ9UJW3 386 aa6.91□□□□□ -1.3
MRPL48-211ENST00000543058 SPINT1O43278 529 aa6.9□□□□□ -1.3
MRPL48-211ENST00000543058 MAN1A2O60476 641 aa6.9□□□□□ -1.3
MRPL48-211ENST00000543058 USP17L8P0C7I0 530 aa6.9□□□□□ -1.3
MRPL48-211ENST00000543058 BMP2P12643 396 aa6.9□□□□□ -1.3
MRPL48-211ENST00000543058 RFC5P40937 340 aa6.9□□□□□ -1.3
MRPL48-211ENST00000543058 VEGFBP49765 207 aa6.9□□□□□ -1.3
MRPL48-211ENST00000543058 DHX9Q08211 1270 aaKnown RBP6.9□□□□□ -1.3
MRPL48-211ENST00000543058 INTS6LQ5JSJ4 861 aaKnown RBP6.9□□□□□ -1.3
MRPL48-211ENST00000543058 C6orf118Q5T5N4 469 aa6.9□□□□□ -1.3
MRPL48-211ENST00000543058 ESPNB1AK53 854 aa6.89□□□□□ -1.31
MRPL48-211ENST00000543058 PPFIA3O75145 1194 aa6.89□□□□□ -1.31
MRPL48-211ENST00000543058 AP1G2O75843 785 aa6.89□□□□□ -1.31
MRPL48-211ENST00000543058 ZBTB33Q86T24 672 aa6.89□□□□□ -1.31
MRPL48-211ENST00000543058 ZSCAN1Q8NBB4 408 aa6.89□□□□□ -1.31
MRPL48-211ENST00000543058 ADAM32Q8TC27 787 aa6.89□□□□□ -1.31
MRPL48-211ENST00000543058 EPS8L1Q8TE68 723 aa6.89□□□□□ -1.31
MRPL48-211ENST00000543058 TRIM34Q9BYJ4 488 aa6.89□□□□□ -1.31
MRPL48-211ENST00000543058 SOCS7O14512 581 aa6.88□□□□□ -1.31
MRPL48-211ENST00000543058 PNMA1Q8ND90 353 aa6.88□□□□□ -1.31
MRPL48-211ENST00000543058 TTLL8A6PVC2 850 aa6.87□□□□□ -1.31
MRPL48-211ENST00000543058 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.87□□□□□ -1.31
MRPL48-211ENST00000543058 NBPF20Q3BBV1 942 aa6.87□□□□□ -1.31
MRPL48-211ENST00000543058 TMEM259Q4ZIN3 620 aa6.87□□□□□ -1.31
MRPL48-211ENST00000543058 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
MRPL48-211ENST00000543058 CBLBQ13191 982 aa6.86□□□□□ -1.31
MRPL48-211ENST00000543058 IL27Q8NEV9 243 aa6.86□□□□□ -1.31
MRPL48-211ENST00000543058 NANOS1Q8WY41 292 aaKnown RBP6.86□□□□□ -1.31
MRPL48-211ENST00000543058 SEPT12Q8IYM1 358 aa6.85□□□□□ -1.31
MRPL48-211ENST00000543058 GJD4Q96KN9 370 aaPredicted RBP6.85□□□□□ -1.31
MRPL48-211ENST00000543058 LILRA1O75019 489 aa6.84□□□□□ -1.31
MRPL48-211ENST00000543058 KDF1Q8NAX2 398 aaPredicted RBP6.84□□□□□ -1.31
MRPL48-211ENST00000543058 ARXQ96QS3 562 aa6.84□□□□□ -1.31
MRPL48-211ENST00000543058 PTSQ03393 145 aa6.83□□□□□ -1.32
MRPL48-211ENST00000543058 PCMTD1Q96MG8 357 aaPredicted RBP6.83□□□□□ -1.32
MRPL48-211ENST00000543058 SLC35F4A4IF30 521 aa6.82□□□□□ -1.32
MRPL48-211ENST00000543058 ADH1AP07327 375 aa6.82□□□□□ -1.32
MRPL48-211ENST00000543058 CCDC125Q86Z20 511 aa6.82□□□□□ -1.32
MRPL48-211ENST00000543058 ZNF784Q8NCA9 323 aaPredicted RBP6.82□□□□□ -1.32
MRPL48-211ENST00000543058 ERVH48-1M5A8F1 160 aa6.81□□□□□ -1.32
MRPL48-211ENST00000543058 GPR37L1O60883 481 aa6.81□□□□□ -1.32
MRPL48-211ENST00000543058 ZBBXA8MT70 800 aa6.8□□□□□ -1.32
MRPL48-211ENST00000543058 CTSOP43234 321 aaPredicted RBP6.8□□□□□ -1.32
MRPL48-211ENST00000543058 KRT76Q01546 638 aa6.8□□□□□ -1.32
MRPL48-211ENST00000543058 DZIP3Q86Y13 1208 aaKnown RBP6.8□□□□□ -1.32
MRPL48-211ENST00000543058 BANK1Q8NDB2 785 aa6.8□□□□□ -1.32
MRPL48-211ENST00000543058 RNF217Q8TC41 542 aa6.8□□□□□ -1.32
MRPL48-211ENST00000543058 TMPRSS4Q9NRS4 437 aa6.8□□□□□ -1.32
MRPL48-211ENST00000543058 SENP3-EIF4A1A0A087X0R7 540 aa6.79□□□□□ -1.32
MRPL48-211ENST00000543058 ADD1P35611 737 aaKnown RBP6.79□□□□□ -1.32
MRPL48-211ENST00000543058 CCDC155Q8N6L0 562 aa6.79□□□□□ -1.32
MRPL48-211ENST00000543058 GPR161Q8N6U8 529 aaKnown RBP6.79□□□□□ -1.32
MRPL48-211ENST00000543058 TRIM52Q96A61 297 aa6.79□□□□□ -1.32
MRPL48-211ENST00000543058 AGBL1Q96MI9 1066 aa6.79□□□□□ -1.32
MRPL48-211ENST00000543058 INSM2Q96T92 566 aaPredicted RBP6.79□□□□□ -1.32
MRPL48-211ENST00000543058 FBXO45P0C2W1 286 aa6.78□□□□□ -1.32
MRPL48-211ENST00000543058 PTGIRP43119 386 aa6.78□□□□□ -1.32
MRPL48-211ENST00000543058 MCCD1P59942 119 aaPredicted RBP6.78□□□□□ -1.32
MRPL48-211ENST00000543058 FOXD4L5Q5VV16 416 aaPredicted RBP6.78□□□□□ -1.32
MRPL48-211ENST00000543058 ITGA6P23229 1130 aa6.77□□□□□ -1.33
MRPL48-211ENST00000543058 RELBQ01201 579 aa6.77□□□□□ -1.33
MRPL48-211ENST00000543058 ATP1B4Q9UN42 357 aaPredicted RBP6.77□□□□□ -1.33
MRPL48-211ENST00000543058 FIGNL2A6NMB9 653 aa6.76□□□□□ -1.33
MRPL48-211ENST00000543058 RNF144AP50876 292 aaPredicted RBP6.76□□□□□ -1.33
MRPL48-211ENST00000543058 ERVK-9P63128 1117 aa6.76□□□□□ -1.33
MRPL48-211ENST00000543058 SLURP2P0DP57 97 aa6.75□□□□□ -1.33
MRPL48-211ENST00000543058 GPC1P35052 558 aa6.75□□□□□ -1.33
MRPL48-211ENST00000543058 MTMR14Q8NCE2 650 aa6.75□□□□□ -1.33
MRPL48-211ENST00000543058 ZNF592Q92610 1267 aa6.75□□□□□ -1.33
MRPL48-211ENST00000543058 GIGYF1O75420 1035 aaPredicted RBP6.74□□□□□ -1.33
MRPL48-211ENST00000543058 GSK3AP49840 483 aa6.74□□□□□ -1.33
MRPL48-211ENST00000543058 NR1H3Q13133 447 aa6.74□□□□□ -1.33
MRPL48-211ENST00000543058 ZNF395Q9H8N7 513 aaPredicted RBP6.74□□□□□ -1.33
MRPL48-211ENST00000543058 POLMQ9NP87 494 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms