RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 ATP7BP35670 1465 aa21.39■■□□□ 1.01
NELFA-216ENST00000542778 GAS2L3Q86XJ1 694 aa21.38■■□□□ 1.01
NELFA-216ENST00000542778 ANKRD26Q9UPS8 1709 aa21.38■■□□□ 1.01
NELFA-216ENST00000542778 SIRT1Q96EB6 747 aa21.38■■□□□ 1.01
NELFA-216ENST00000542778 PCDHB15Q9Y5E8 787 aa21.37■■□□□ 1.01
NELFA-216ENST00000542778 CPSF1Q10570 1443 aaKnown RBP21.37■■□□□ 1.01
NELFA-216ENST00000542778 C22orf23Q9BZE7 217 aa21.37■■□□□ 1.01
NELFA-216ENST00000542778 TBX22Q9Y458 520 aa21.37■■□□□ 1.01
NELFA-216ENST00000542778 CCDC61Q9Y6R9 512 aa21.37■■□□□ 1.01
NELFA-216ENST00000542778 PRDM4Q9UKN5 801 aa21.36■■□□□ 1.01
NELFA-216ENST00000542778 KCNA6P17658 529 aa21.35■■□□□ 1.01
NELFA-216ENST00000542778 NCOA3Q9Y6Q9 1424 aa21.35■■□□□ 1.01
NELFA-216ENST00000542778 AAMPQ13685 434 aa21.35■■□□□ 1.01
NELFA-216ENST00000542778 DDIT3P35638 169 aa21.34■■□□□ 1.01
NELFA-216ENST00000542778 U2AF1L5P0DN76 240 aaPredicted RBP21.33■■□□□ 1.01
NELFA-216ENST00000542778 U2AF1Q01081 240 aaKnown RBP eCLIP21.33■■□□□ 1.01
NELFA-216ENST00000542778 RGPD8O14715 1765 aaPredicted RBP21.33■■□□□ 1
NELFA-216ENST00000542778 CDC42BPGQ6DT37 1551 aa21.32■■□□□ 1
NELFA-216ENST00000542778 CFAP53Q96M91 514 aa21.32■■□□□ 1
NELFA-216ENST00000542778 U2SURPO15042 1029 aaKnown RBP21.32■■□□□ 1
NELFA-216ENST00000542778 HSCBQ8IWL3 235 aa21.32■■□□□ 1
NELFA-216ENST00000542778 OFD1O75665 1012 aa21.31■■□□□ 1
NELFA-216ENST00000542778 COL3A1P02461 1466 aaPredicted RBP21.31■■□□□ 1
NELFA-216ENST00000542778 MFAP1P55081 439 aaKnown RBP21.31■■□□□ 1
NELFA-216ENST00000542778 TCP11L2Q8N4U5 519 aa21.31■■□□□ 1
NELFA-216ENST00000542778 MAP2P11137 1827 aaKnown RBP21.31■■□□□ 1
NELFA-216ENST00000542778 RIPK4P57078 832 aa21.3■■□□□ 1
NELFA-216ENST00000542778 EMILIN1Q9Y6C2 1016 aa21.3■■□□□ 1
NELFA-216ENST00000542778 CCDC173Q0VFZ6 552 aa21.3■■□□□ 1
NELFA-216ENST00000542778 NGEFQ8N5V2 710 aa21.3■■□□□ 1
NELFA-216ENST00000542778 ACEP12821 1306 aa21.3■■□□□ 1
NELFA-216ENST00000542778 MON2Q7Z3U7 1717 aa21.29■■□□□ 1
NELFA-216ENST00000542778 AKAP12Q02952 1782 aa21.29■■□□□ 1
NELFA-216ENST00000542778 TNPO1Q92973 898 aaKnown RBP21.29■■□□□ 1
NELFA-216ENST00000542778 PPP1R9BQ96SB3 815 aa21.29■■□□□ 1
NELFA-216ENST00000542778 POLKQ9UBT6 870 aa21.29■■□□□ 1
NELFA-216ENST00000542778 ADGRB2O60241 1585 aa21.29■■□□□ 1
NELFA-216ENST00000542778 PLEKHG5O94827 1062 aa21.29■■□□□ 1
NELFA-216ENST00000542778 ZSCAN30Q86W11 494 aa21.29■■□□□ 1
NELFA-216ENST00000542778 RWDD1Q9H446 243 aaPredicted RBP21.29■■□□□ 1
NELFA-216ENST00000542778 EDC4Q6P2E9 1401 aaKnown RBP21.29■■□□□ 1
NELFA-216ENST00000542778 ITSN1Q15811 1721 aa21.28■■□□□ 1
NELFA-216ENST00000542778 RLBP1P12271 317 aa21.28■■□□□ 1
NELFA-216ENST00000542778 RUNDC1Q96C34 613 aa21.28■■□□□ 1
NELFA-216ENST00000542778 TERF1P54274 439 aa21.28■■□□□ 1
NELFA-216ENST00000542778 RRS1Q15050 365 aaKnown RBP21.28■■□□□ 1
NELFA-216ENST00000542778 XRN1Q8IZH2 1706 aaKnown RBP21.27■■□□□ 1
NELFA-216ENST00000542778 WWC1Q8IX03 1113 aa21.27■■□□□ 1
NELFA-216ENST00000542778 SKOR2Q2VWA4 1001 aaPredicted RBP21.27■□□□□ 0.99
NELFA-216ENST00000542778 ANKLE2Q86XL3 938 aa21.27■□□□□ 0.99
NELFA-216ENST00000542778 TOPAZ1Q8N9V7 1692 aa21.26■□□□□ 0.99
NELFA-216ENST00000542778 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.26■□□□□ 0.99
NELFA-216ENST00000542778 TNNQ9UQP3 1299 aa21.26■□□□□ 0.99
NELFA-216ENST00000542778 IQSEC2Q5JU85 1478 aa21.26■□□□□ 0.99
NELFA-216ENST00000542778 RARSP54136 660 aaKnown RBP21.26■□□□□ 0.99
NELFA-216ENST00000542778 RBM10P98175 930 aaKnown RBP21.26■□□□□ 0.99
NELFA-216ENST00000542778 ZNF142P52746 1687 aaPredicted RBP21.25■□□□□ 0.99
NELFA-216ENST00000542778 GBP4Q96PP9 640 aa21.25■□□□□ 0.99
NELFA-216ENST00000542778 PTCH1Q13635 1447 aa21.25■□□□□ 0.99
NELFA-216ENST00000542778 SETD1BQ9UPS6 1966 aaKnown RBP21.24■□□□□ 0.99
NELFA-216ENST00000542778 DIP2AQ14689 1571 aa21.24■□□□□ 0.99
NELFA-216ENST00000542778 SOX12O15370 315 aa21.23■□□□□ 0.99
NELFA-216ENST00000542778 MAP7D2Q96T17 732 aa21.23■□□□□ 0.99
NELFA-216ENST00000542778 CIZ1Q9ULV3 898 aaPredicted RBP21.23■□□□□ 0.99
NELFA-216ENST00000542778 RAB3GAP1Q15042 981 aa21.22■□□□□ 0.99
NELFA-216ENST00000542778 SMC5Q8IY18 1101 aa21.22■□□□□ 0.99
NELFA-216ENST00000542778 PTMSP20962 102 aa21.22■□□□□ 0.99
NELFA-216ENST00000542778 NASPP49321 788 aaPredicted RBP21.22■□□□□ 0.99
NELFA-216ENST00000542778 PNPLA6Q8IY17 1366 aa21.21■□□□□ 0.99
NELFA-216ENST00000542778 DIAPH1O60610 1272 aaKnown RBP21.21■□□□□ 0.99
NELFA-216ENST00000542778 SNX21Q969T3 373 aa21.21■□□□□ 0.99
NELFA-216ENST00000542778 PLEKHF1Q96S99 279 aa21.21■□□□□ 0.99
NELFA-216ENST00000542778 TTC21BQ7Z4L5 1316 aa21.21■□□□□ 0.99
NELFA-216ENST00000542778 MSNP26038 577 aaKnown RBP21.21■□□□□ 0.99
NELFA-216ENST00000542778 COG3Q96JB2 828 aa21.2■□□□□ 0.98
NELFA-216ENST00000542778 NRKQ7Z2Y5 1582 aa21.2■□□□□ 0.98
NELFA-216ENST00000542778 PLEKHG3A1L390 1219 aa21.2■□□□□ 0.98
NELFA-216ENST00000542778 CHD2O14647 1828 aaKnown RBP21.19■□□□□ 0.98
NELFA-216ENST00000542778 HMOX1P09601 288 aa21.19■□□□□ 0.98
NELFA-216ENST00000542778 USP6P35125 1406 aa21.18■□□□□ 0.98
NELFA-216ENST00000542778 FAM13BQ9NYF5 915 aa21.18■□□□□ 0.98
NELFA-216ENST00000542778 RBM25P49756 843 aaKnown RBP21.17■□□□□ 0.98
NELFA-216ENST00000542778 ANP32BQ92688 251 aaKnown RBP21.17■□□□□ 0.98
NELFA-216ENST00000542778 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
NELFA-216ENST00000542778 R3HCC1Q9Y3T6 440 aaKnown RBP21.16■□□□□ 0.98
NELFA-216ENST00000542778 NALCNQ8IZF0 1738 aa21.16■□□□□ 0.98
NELFA-216ENST00000542778 BCL2L13Q9BXK5 485 aa21.16■□□□□ 0.98
NELFA-216ENST00000542778 IBTKQ9P2D0 1353 aaPredicted RBP21.16■□□□□ 0.98
NELFA-216ENST00000542778 NUTM2GQ5VZR2 741 aa21.15■□□□□ 0.98
NELFA-216ENST00000542778 NGDNQ8NEJ9 315 aaKnown RBP21.15■□□□□ 0.98
NELFA-216ENST00000542778 HSP90AB1P08238 724 aaKnown RBP21.15■□□□□ 0.98
NELFA-216ENST00000542778 MVPQ14764 893 aaKnown RBP21.14■□□□□ 0.98
NELFA-216ENST00000542778 LRRC7Q96NW7 1537 aa21.13■□□□□ 0.97
NELFA-216ENST00000542778 TMPOP42166 694 aaKnown RBP21.13■□□□□ 0.97
NELFA-216ENST00000542778 SMAP1Q8IYB5 467 aaPredicted RBP21.13■□□□□ 0.97
NELFA-216ENST00000542778 PHACTR3Q96KR7 559 aa21.13■□□□□ 0.97
NELFA-216ENST00000542778 TRIM35Q9UPQ4 493 aa21.13■□□□□ 0.97
NELFA-216ENST00000542778 NPHP4O75161 1426 aaPredicted RBP21.12■□□□□ 0.97
NELFA-216ENST00000542778 SSH2Q76I76 1423 aa21.12■□□□□ 0.97
NELFA-216ENST00000542778 PRKAR2BP31323 418 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms