RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 GCP02774 474 aa17.6■□□□□ 0.41
CHFR-221ENST00000542714 HOXC9P31274 260 aa17.6■□□□□ 0.41
CHFR-221ENST00000542714 AMPHP49418 695 aa17.6■□□□□ 0.41
CHFR-221ENST00000542714 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
CHFR-221ENST00000542714 RSPH6AQ9H0K4 717 aa17.59■□□□□ 0.41
CHFR-221ENST00000542714 SALL2Q9Y467 1007 aaPredicted RBP17.59■□□□□ 0.41
CHFR-221ENST00000542714 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
CHFR-221ENST00000542714 ARHGEF25Q86VW2 580 aa17.57■□□□□ 0.4
CHFR-221ENST00000542714 IP6K1Q92551 441 aa17.57■□□□□ 0.4
CHFR-221ENST00000542714 PHLPP1O60346 1717 aa17.57■□□□□ 0.4
CHFR-221ENST00000542714 DLG5Q8TDM6 1919 aa17.57■□□□□ 0.4
CHFR-221ENST00000542714 CAMTA1Q9Y6Y1 1673 aa17.56■□□□□ 0.4
CHFR-221ENST00000542714 PLEKHG5O94827 1062 aa17.56■□□□□ 0.4
CHFR-221ENST00000542714 FCHSD2O94868 740 aa17.56■□□□□ 0.4
CHFR-221ENST00000542714 TCP11L2Q8N4U5 519 aa17.56■□□□□ 0.4
CHFR-221ENST00000542714 COL16A1Q07092 1604 aaPredicted RBP17.56■□□□□ 0.4
CHFR-221ENST00000542714 COL22A1Q8NFW1 1626 aaPredicted RBP17.55■□□□□ 0.4
CHFR-221ENST00000542714 HMOX1P09601 288 aa17.55■□□□□ 0.4
CHFR-221ENST00000542714 CABLES1Q8TDN4 633 aa17.55■□□□□ 0.4
CHFR-221ENST00000542714 ABCC6O95255 1503 aa17.55■□□□□ 0.4
CHFR-221ENST00000542714 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
CHFR-221ENST00000542714 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
CHFR-221ENST00000542714 AEBP1Q8IUX7 1158 aa17.53■□□□□ 0.4
CHFR-221ENST00000542714 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
CHFR-221ENST00000542714 RRP7AQ9Y3A4 280 aaKnown RBP17.53■□□□□ 0.4
CHFR-221ENST00000542714 LMO7Q8WWI1 1683 aa17.52■□□□□ 0.4
CHFR-221ENST00000542714 ZBTB7CA1YPR0 619 aa17.52■□□□□ 0.4
CHFR-221ENST00000542714 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
CHFR-221ENST00000542714 NGEFQ8N5V2 710 aa17.52■□□□□ 0.4
CHFR-221ENST00000542714 CPDO75976 1380 aa17.52■□□□□ 0.39
CHFR-221ENST00000542714 KDRP35968 1356 aa17.52■□□□□ 0.39
CHFR-221ENST00000542714 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
CHFR-221ENST00000542714 CDCA7LQ96GN5 454 aa17.51■□□□□ 0.39
CHFR-221ENST00000542714 EYA1Q99502 592 aa17.51■□□□□ 0.39
CHFR-221ENST00000542714 PNNQ9H307 717 aaKnown RBP17.51■□□□□ 0.39
CHFR-221ENST00000542714 MAPK8IP3Q9UPT6 1336 aa17.5■□□□□ 0.39
CHFR-221ENST00000542714 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
CHFR-221ENST00000542714 SULT6B1Q6IMI4 303 aa17.5■□□□□ 0.39
CHFR-221ENST00000542714 PHACTR3Q96KR7 559 aa17.5■□□□□ 0.39
CHFR-221ENST00000542714 FAM208AQ9UK61 1670 aaKnown RBP17.5■□□□□ 0.39
CHFR-221ENST00000542714 NCAPD2Q15021 1401 aa17.49■□□□□ 0.39
CHFR-221ENST00000542714 TMPOP42166 694 aaKnown RBP17.49■□□□□ 0.39
CHFR-221ENST00000542714 LTV1Q96GA3 475 aaPredicted RBP17.49■□□□□ 0.39
CHFR-221ENST00000542714 TOM1O60784 492 aa17.48■□□□□ 0.39
CHFR-221ENST00000542714 CCDC27Q2M243 656 aa17.48■□□□□ 0.39
CHFR-221ENST00000542714 WWC1Q8IX03 1113 aa17.48■□□□□ 0.39
CHFR-221ENST00000542714 AXIN2Q9Y2T1 843 aa17.48■□□□□ 0.39
CHFR-221ENST00000542714 KIAA0232Q92628 1395 aa17.48■□□□□ 0.39
CHFR-221ENST00000542714 NEUROD2Q15784 382 aa17.47■□□□□ 0.39
CHFR-221ENST00000542714 TRIM35Q9UPQ4 493 aa17.46■□□□□ 0.39
CHFR-221ENST00000542714 UBAP1LF5GYI3 381 aa17.45■□□□□ 0.38
CHFR-221ENST00000542714 PIP4K2BP78356 416 aa17.45■□□□□ 0.38
CHFR-221ENST00000542714 GOLGA2Q08379 1002 aa17.45■□□□□ 0.38
CHFR-221ENST00000542714 NFE2L2Q16236 605 aa17.45■□□□□ 0.38
CHFR-221ENST00000542714 CERKQ8TCT0 537 aa17.45■□□□□ 0.38
CHFR-221ENST00000542714 ANKRD24Q8TF21 1146 aa17.45■□□□□ 0.38
CHFR-221ENST00000542714 LRRC59Q96AG4 307 aaKnown RBP17.45■□□□□ 0.38
CHFR-221ENST00000542714 SPINK5Q9NQ38 1064 aaPredicted RBP17.45■□□□□ 0.38
CHFR-221ENST00000542714 SLFN5Q08AF3 891 aa17.44■□□□□ 0.38
CHFR-221ENST00000542714 CHRNA2Q15822 529 aa17.44■□□□□ 0.38
CHFR-221ENST00000542714 NBPF6Q5VWK0 638 aa17.44■□□□□ 0.38
CHFR-221ENST00000542714 TRMT2AQ8IZ69 625 aaKnown RBP17.44■□□□□ 0.38
CHFR-221ENST00000542714 NBPF4Q96M43 638 aa17.44■□□□□ 0.38
CHFR-221ENST00000542714 RIPK4P57078 832 aa17.43■□□□□ 0.38
CHFR-221ENST00000542714 USHBP1Q8N6Y0 703 aa17.43■□□□□ 0.38
CHFR-221ENST00000542714 ERBB3P21860 1342 aa17.43■□□□□ 0.38
CHFR-221ENST00000542714 NEFMP07197 916 aa17.42■□□□□ 0.38
CHFR-221ENST00000542714 DUSP27Q5VZP5 1158 aa17.42■□□□□ 0.38
CHFR-221ENST00000542714 WDR63Q8IWG1 891 aa17.42■□□□□ 0.38
CHFR-221ENST00000542714 COL14A1Q05707 1796 aaKnown RBP17.42■□□□□ 0.38
CHFR-221ENST00000542714 LRRC37A3O60309 1634 aa17.39■□□□□ 0.38
CHFR-221ENST00000542714 COL5A2P05997 1499 aaPredicted RBP17.39■□□□□ 0.37
CHFR-221ENST00000542714 E9PSI1 815 aa17.39■□□□□ 0.37
CHFR-221ENST00000542714 HAP1P54257 671 aaPredicted RBP17.39■□□□□ 0.37
CHFR-221ENST00000542714 PRDM11Q9NQV5 511 aa17.39■□□□□ 0.37
CHFR-221ENST00000542714 VIRMAQ69YN4 1812 aaKnown RBP17.39■□□□□ 0.37
CHFR-221ENST00000542714 PLCH1Q4KWH8 1693 aa17.39■□□□□ 0.37
CHFR-221ENST00000542714 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
CHFR-221ENST00000542714 IL16Q14005 1332 aa17.37■□□□□ 0.37
CHFR-221ENST00000542714 SUPT16HQ9Y5B9 1047 aaKnown RBP17.36■□□□□ 0.37
CHFR-221ENST00000542714 GTF3C3Q9Y5Q9 886 aa17.36■□□□□ 0.37
CHFR-221ENST00000542714 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
CHFR-221ENST00000542714 NRAPQ86VF7 1730 aa17.35■□□□□ 0.37
CHFR-221ENST00000542714 FAM83GA6ND36 823 aa17.35■□□□□ 0.37
CHFR-221ENST00000542714 THUMPD2Q9BTF0 503 aaKnown RBP17.35■□□□□ 0.37
CHFR-221ENST00000542714 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
CHFR-221ENST00000542714 PARP4Q9UKK3 1724 aaKnown RBP17.34■□□□□ 0.37
CHFR-221ENST00000542714 MEGF6O75095 1541 aa17.33■□□□□ 0.37
CHFR-221ENST00000542714 RNF123Q5XPI4 1314 aa17.33■□□□□ 0.36
CHFR-221ENST00000542714 WDR17Q8IZU2 1322 aa17.33■□□□□ 0.36
CHFR-221ENST00000542714 GAS2L2Q8NHY3 880 aa17.33■□□□□ 0.36
CHFR-221ENST00000542714 NLRP2Q9NX02 1062 aa17.33■□□□□ 0.36
CHFR-221ENST00000542714 CSB-PGBD3P0DP91 1061 aa17.32■□□□□ 0.36
CHFR-221ENST00000542714 DCTN1Q14203 1278 aa17.32■□□□□ 0.36
CHFR-221ENST00000542714 RCAN3Q9UKA8 241 aa17.32■□□□□ 0.36
CHFR-221ENST00000542714 WNK3Q9BYP7 1800 aa17.31■□□□□ 0.36
CHFR-221ENST00000542714 FANCIQ9NVI1 1328 aa17.31■□□□□ 0.36
CHFR-221ENST00000542714 SHANK3Q9BYB0 1731 aa17.31■□□□□ 0.36
CHFR-221ENST00000542714 ADAMTS7Q9UKP4 1686 aa17.31■□□□□ 0.36
CHFR-221ENST00000542714 CRB1P82279 1406 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms