RNA–Protein interactions for RNA: ENST00000542287.6

ATXN2-215, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-215ENST00000542287 PMFBP1Q8TBY8 1022 aa7.69□□□□□ -1.18
ATXN2-215ENST00000542287 SLC12A5Q9H2X9 1139 aa7.69□□□□□ -1.18
ATXN2-215ENST00000542287 CPDO75976 1380 aa7.68□□□□□ -1.18
ATXN2-215ENST00000542287 NPC1L1Q9UHC9 1359 aa7.68□□□□□ -1.18
ATXN2-215ENST00000542287 COL18A1P39060 1754 aa7.68□□□□□ -1.18
ATXN2-215ENST00000542287 NUTM2FA1L443 756 aa7.68□□□□□ -1.18
ATXN2-215ENST00000542287 PLIN1O60240 522 aa7.68□□□□□ -1.18
ATXN2-215ENST00000542287 CCDC146Q8IYE0 955 aa7.68□□□□□ -1.18
ATXN2-215ENST00000542287 INSRP06213 1382 aa7.67□□□□□ -1.18
ATXN2-215ENST00000542287 FAM208AQ9UK61 1670 aaKnown RBP7.67□□□□□ -1.18
ATXN2-215ENST00000542287 DEKP35659 375 aaKnown RBP7.67□□□□□ -1.18
ATXN2-215ENST00000542287 PDE3BQ13370 1112 aa7.67□□□□□ -1.18
ATXN2-215ENST00000542287 EXOC6Q8TAG9 804 aa7.67□□□□□ -1.18
ATXN2-215ENST00000542287 WDR43Q15061 677 aaKnown RBP eCLIP7.67□□□□□ -1.18
ATXN2-215ENST00000542287 PKNOX2Q96KN3 472 aa7.66□□□□□ -1.18
ATXN2-215ENST00000542287 NSD3Q9BZ95 1437 aa7.66□□□□□ -1.18
ATXN2-215ENST00000542287 DDX17Q92841 729 aaKnown RBP7.66□□□□□ -1.18
ATXN2-215ENST00000542287 SLIT2O94813 1529 aa7.66□□□□□ -1.18
ATXN2-215ENST00000542287 TNNT2P45379 298 aaPredicted RBP7.66□□□□□ -1.18
ATXN2-215ENST00000542287 KIF24Q5T7B8 1368 aa7.66□□□□□ -1.18
ATXN2-215ENST00000542287 LTN1O94822 1766 aa7.65□□□□□ -1.18
ATXN2-215ENST00000542287 CGNL1Q0VF96 1302 aa7.65□□□□□ -1.18
ATXN2-215ENST00000542287 ZNF521Q96K83 1311 aa7.65□□□□□ -1.18
ATXN2-215ENST00000542287 KCNH5Q8NCM2 988 aa7.65□□□□□ -1.18
ATXN2-215ENST00000542287 ZBTB22O15209 634 aa7.65□□□□□ -1.19
ATXN2-215ENST00000542287 SPINK5Q9NQ38 1064 aaPredicted RBP7.65□□□□□ -1.19
ATXN2-215ENST00000542287 WNK3Q9BYP7 1800 aa7.65□□□□□ -1.19
ATXN2-215ENST00000542287 APAF1O14727 1248 aa7.64□□□□□ -1.19
ATXN2-215ENST00000542287 DUSP27Q5VZP5 1158 aa7.64□□□□□ -1.19
ATXN2-215ENST00000542287 RTL1A6NKG5 1358 aa7.64□□□□□ -1.19
ATXN2-215ENST00000542287 CDK12Q9NYV4 1490 aaPredicted RBP7.64□□□□□ -1.19
ATXN2-215ENST00000542287 CAMTA1Q9Y6Y1 1673 aa7.64□□□□□ -1.19
ATXN2-215ENST00000542287 AATKQ6ZMQ8 1374 aa7.64□□□□□ -1.19
ATXN2-215ENST00000542287 C20orf194Q5TEA3 1177 aa7.63□□□□□ -1.19
ATXN2-215ENST00000542287 ATRNO75882 1429 aa7.63□□□□□ -1.19
ATXN2-215ENST00000542287 XPCQ01831 940 aaPredicted RBP7.63□□□□□ -1.19
ATXN2-215ENST00000542287 FNBP4Q8N3X1 1017 aaPredicted RBP7.63□□□□□ -1.19
ATXN2-215ENST00000542287 ABTB2Q8N961 1025 aa7.63□□□□□ -1.19
ATXN2-215ENST00000542287 MORC1Q86VD1 984 aa7.62□□□□□ -1.19
ATXN2-215ENST00000542287 NPM3O75607 178 aaKnown RBP7.61□□□□□ -1.19
ATXN2-215ENST00000542287 PAK3O75914 559 aaPredicted RBP7.61□□□□□ -1.19
ATXN2-215ENST00000542287 GOLGA2Q08379 1002 aa7.61□□□□□ -1.19
ATXN2-215ENST00000542287 CRBNQ96SW2 442 aa7.61□□□□□ -1.19
ATXN2-215ENST00000542287 FANCIQ9NVI1 1328 aa7.61□□□□□ -1.19
ATXN2-215ENST00000542287 FYB1O15117 783 aa7.61□□□□□ -1.19
ATXN2-215ENST00000542287 ZNF772Q68DY9 489 aaPredicted RBP7.61□□□□□ -1.19
ATXN2-215ENST00000542287 SKAP1Q86WV1 359 aa7.61□□□□□ -1.19
ATXN2-215ENST00000542287 PLEKHG2Q9H7P9 1386 aa7.61□□□□□ -1.19
ATXN2-215ENST00000542287 NLRP6P59044 892 aa7.61□□□□□ -1.19
ATXN2-215ENST00000542287 SLFN5Q08AF3 891 aa7.61□□□□□ -1.19
ATXN2-215ENST00000542287 COG3Q96JB2 828 aa7.61□□□□□ -1.19
ATXN2-215ENST00000542287 PEAK1Q9H792 1746 aa7.61□□□□□ -1.19
ATXN2-215ENST00000542287 BCL9LQ86UU0 1499 aa7.6□□□□□ -1.19
ATXN2-215ENST00000542287 THSD7AQ9UPZ6 1657 aa7.6□□□□□ -1.19
ATXN2-215ENST00000542287 GCP02774 474 aa7.6□□□□□ -1.19
ATXN2-215ENST00000542287 NME9Q86XW9 330 aa7.6□□□□□ -1.19
ATXN2-215ENST00000542287 MTHFSP49914 203 aa7.6□□□□□ -1.19
ATXN2-215ENST00000542287 MEX3CQ5U5Q3 659 aaKnown RBP7.59□□□□□ -1.19
ATXN2-215ENST00000542287 ARHGEF25Q86VW2 580 aa7.59□□□□□ -1.19
ATXN2-215ENST00000542287 TRMT2AQ8IZ69 625 aaKnown RBP7.59□□□□□ -1.19
ATXN2-215ENST00000542287 RGPD5Q99666 1765 aa7.59□□□□□ -1.19
ATXN2-215ENST00000542287 COL5A2P05997 1499 aaPredicted RBP7.59□□□□□ -1.19
ATXN2-215ENST00000542287 KIAA0232Q92628 1395 aa7.59□□□□□ -1.19
ATXN2-215ENST00000542287 PODXL2Q9NZ53 605 aa7.59□□□□□ -1.19
ATXN2-215ENST00000542287 RRP7AQ9Y3A4 280 aaKnown RBP7.59□□□□□ -1.19
ATXN2-215ENST00000542287 PARP4Q9UKK3 1724 aaKnown RBP7.59□□□□□ -1.19
ATXN2-215ENST00000542287 GLI3P10071 1580 aa7.59□□□□□ -1.19
ATXN2-215ENST00000542287 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
ATXN2-215ENST00000542287 MAP2P11137 1827 aaKnown RBP7.59□□□□□ -1.19
ATXN2-215ENST00000542287 NCAPD2Q15021 1401 aa7.58□□□□□ -1.2
ATXN2-215ENST00000542287 AFF2P51816 1311 aa7.58□□□□□ -1.2
ATXN2-215ENST00000542287 VPS72Q15906 364 aa7.58□□□□□ -1.2
ATXN2-215ENST00000542287 UNC5CLQ8IV45 518 aa7.58□□□□□ -1.2
ATXN2-215ENST00000542287 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.58□□□□□ -1.2
ATXN2-215ENST00000542287 GGNBP2Q9H3C7 697 aa7.58□□□□□ -1.2
ATXN2-215ENST00000542287 RGPD1P0DJD0 1748 aa7.57□□□□□ -1.2
ATXN2-215ENST00000542287 FAM83GA6ND36 823 aa7.57□□□□□ -1.2
ATXN2-215ENST00000542287 NUTM2BA6NNL0 878 aaPredicted RBP7.57□□□□□ -1.2
ATXN2-215ENST00000542287 NUTM2EB1AL46 878 aaPredicted RBP7.57□□□□□ -1.2
ATXN2-215ENST00000542287 BCAR3O75815 825 aa7.57□□□□□ -1.2
ATXN2-215ENST00000542287 HAP1P54257 671 aaPredicted RBP7.57□□□□□ -1.2
ATXN2-215ENST00000542287 LMOD2Q6P5Q4 547 aa7.57□□□□□ -1.2
ATXN2-215ENST00000542287 NUTM2AQ8IVF1 878 aaPredicted RBP7.57□□□□□ -1.2
ATXN2-215ENST00000542287 WWC1Q8IX03 1113 aa7.57□□□□□ -1.2
ATXN2-215ENST00000542287 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.57□□□□□ -1.2
ATXN2-215ENST00000542287 TRPC5Q9UL62 973 aaPredicted RBP7.57□□□□□ -1.2
ATXN2-215ENST00000542287 CABLES1Q8TDN4 633 aa7.56□□□□□ -1.2
ATXN2-215ENST00000542287 IP6K1Q92551 441 aa7.56□□□□□ -1.2
ATXN2-215ENST00000542287 CRB1P82279 1406 aa7.56□□□□□ -1.2
ATXN2-215ENST00000542287 FLT4P35916 1363 aa7.56□□□□□ -1.2
ATXN2-215ENST00000542287 TCP11L2Q8N4U5 519 aa7.56□□□□□ -1.2
ATXN2-215ENST00000542287 RGS17Q9UGC6 210 aaPredicted RBP7.56□□□□□ -1.2
ATXN2-215ENST00000542287 THRAP3Q9Y2W1 955 aaKnown RBP7.56□□□□□ -1.2
ATXN2-215ENST00000542287 NGLY1Q96IV0 654 aa7.56□□□□□ -1.2
ATXN2-215ENST00000542287 PRDM11Q9NQV5 511 aa7.56□□□□□ -1.2
ATXN2-215ENST00000542287 ZRANB1Q9UGI0 708 aa7.56□□□□□ -1.2
ATXN2-215ENST00000542287 USP21Q9UK80 565 aa7.56□□□□□ -1.2
ATXN2-215ENST00000542287 FBLN1P23142 703 aa7.55□□□□□ -1.2
ATXN2-215ENST00000542287 SPATA31A5Q5VU36 1347 aa7.55□□□□□ -1.2
ATXN2-215ENST00000542287 SPATA31A7Q8IWB4 1347 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms