RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 PTK2Q05397 1052 aa10.64□□□□□ -0.71
CIT-211ENST00000541841 NFX1Q12986 1120 aaKnown RBP10.64□□□□□ -0.71
CIT-211ENST00000541841 LCE2CQ5TA81 110 aa10.64□□□□□ -0.71
CIT-211ENST00000541841 CCDC116Q8IYX3 515 aa10.64□□□□□ -0.71
CIT-211ENST00000541841 ZC3H4Q9UPT8 1303 aaKnown RBP10.63□□□□□ -0.71
CIT-211ENST00000541841 WFS1O76024 890 aa10.63□□□□□ -0.71
CIT-211ENST00000541841 VEGFBP49765 207 aa10.63□□□□□ -0.71
CIT-211ENST00000541841 TMEM259Q4ZIN3 620 aa10.63□□□□□ -0.71
CIT-211ENST00000541841 KCTD15Q96SI1 283 aaPredicted RBP10.63□□□□□ -0.71
CIT-211ENST00000541841 RAB15P59190 212 aa10.62□□□□□ -0.71
CIT-211ENST00000541841 SCARF1Q14162 830 aa10.62□□□□□ -0.71
CIT-211ENST00000541841 GJD4Q96KN9 370 aaPredicted RBP10.62□□□□□ -0.71
CIT-211ENST00000541841 CBLBQ13191 982 aa10.61□□□□□ -0.71
CIT-211ENST00000541841 PPP1R26Q5T8A7 1209 aaPredicted RBP10.61□□□□□ -0.71
CIT-211ENST00000541841 TERTO14746 1132 aaKnown RBP10.6□□□□□ -0.71
CIT-211ENST00000541841 INTS6LQ5JSJ4 861 aaKnown RBP10.6□□□□□ -0.71
CIT-211ENST00000541841 MEIOBQ8N635 442 aa10.6□□□□□ -0.71
CIT-211ENST00000541841 BMP2P12643 396 aa10.59□□□□□ -0.71
CIT-211ENST00000541841 LINC00528Q8N1L1 170 aa10.59□□□□□ -0.71
CIT-211ENST00000541841 SNRKQ9NRH2 765 aa10.58□□□□□ -0.72
CIT-211ENST00000541841 EMILIN1Q9Y6C2 1016 aa10.58□□□□□ -0.72
CIT-211ENST00000541841 PNMA1Q8ND90 353 aa10.57□□□□□ -0.72
CIT-211ENST00000541841 GPSM3Q9Y4H4 160 aa10.57□□□□□ -0.72
CIT-211ENST00000541841 DZIP3Q86Y13 1208 aaKnown RBP10.56□□□□□ -0.72
CIT-211ENST00000541841 MTMR14Q8NCE2 650 aa10.56□□□□□ -0.72
CIT-211ENST00000541841 TMPRSS4Q9NRS4 437 aa10.56□□□□□ -0.72
CIT-211ENST00000541841 FBXO45P0C2W1 286 aa10.55□□□□□ -0.72
CIT-211ENST00000541841 UPP2O95045 317 aa10.54□□□□□ -0.72
CIT-211ENST00000541841 AGBL1Q96MI9 1066 aa10.54□□□□□ -0.72
CIT-211ENST00000541841 NXF1Q9UBU9 619 aaKnown RBP10.54□□□□□ -0.72
CIT-211ENST00000541841 GPR37L1O60883 481 aa10.53□□□□□ -0.72
CIT-211ENST00000541841 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
CIT-211ENST00000541841 CDV3Q9UKY7 258 aaKnown RBP10.53□□□□□ -0.72
CIT-211ENST00000541841 MAN1A2O60476 641 aa10.52□□□□□ -0.73
CIT-211ENST00000541841 PCDHB9Q9Y5E1 797 aa10.52□□□□□ -0.73
CIT-211ENST00000541841 ZBBXA8MT70 800 aa10.51□□□□□ -0.73
CIT-211ENST00000541841 ERVH48-1M5A8F1 160 aa10.51□□□□□ -0.73
CIT-211ENST00000541841 NBPF20Q3BBV1 942 aa10.51□□□□□ -0.73
CIT-211ENST00000541841 Q6ZVU0 165 aa10.51□□□□□ -0.73
CIT-211ENST00000541841 ZNF784Q8NCA9 323 aaPredicted RBP10.51□□□□□ -0.73
CIT-211ENST00000541841 TSEN34Q9BSV6 310 aaKnown RBP10.51□□□□□ -0.73
CIT-211ENST00000541841 DNMT3LQ9UJW3 386 aa10.51□□□□□ -0.73
CIT-211ENST00000541841 RELBQ01201 579 aa10.5□□□□□ -0.73
CIT-211ENST00000541841 DHX9Q08211 1270 aaKnown RBP10.5□□□□□ -0.73
CIT-211ENST00000541841 SOS2Q07890 1332 aaPredicted RBP10.5□□□□□ -0.73
CIT-211ENST00000541841 BANK1Q8NDB2 785 aa10.49□□□□□ -0.73
CIT-211ENST00000541841 FIGNL2A6NMB9 653 aa10.48□□□□□ -0.73
CIT-211ENST00000541841 GIGYF1O75420 1035 aaPredicted RBP10.48□□□□□ -0.73
CIT-211ENST00000541841 ADD1P35611 737 aaKnown RBP10.48□□□□□ -0.73
CIT-211ENST00000541841 ERBB4Q15303 1308 aa10.48□□□□□ -0.73
CIT-211ENST00000541841 ESPNB1AK53 854 aa10.47□□□□□ -0.73
CIT-211ENST00000541841 SLC16A10Q8TF71 515 aa10.47□□□□□ -0.73
CIT-211ENST00000541841 ZNF395Q9H8N7 513 aaPredicted RBP10.47□□□□□ -0.73
CIT-211ENST00000541841 CYLDQ9NQC7 956 aa10.47□□□□□ -0.73
CIT-211ENST00000541841 TTLL8A6PVC2 850 aa10.46□□□□□ -0.73
CIT-211ENST00000541841 H3BM21 787 aa10.46□□□□□ -0.73
CIT-211ENST00000541841 LILRA1O75019 489 aa10.46□□□□□ -0.73
CIT-211ENST00000541841 NDUFB9Q9Y6M9 179 aa10.46□□□□□ -0.73
CIT-211ENST00000541841 GMPRP36959 345 aa10.45□□□□□ -0.74
CIT-211ENST00000541841 INSM2Q96T92 566 aaPredicted RBP10.45□□□□□ -0.74
CIT-211ENST00000541841 TBC1D2BQ9UPU7 963 aa10.45□□□□□ -0.74
CIT-211ENST00000541841 SPINT1O43278 529 aa10.44□□□□□ -0.74
CIT-211ENST00000541841 CTSOP43234 321 aaPredicted RBP10.44□□□□□ -0.74
CIT-211ENST00000541841 NR1H3Q13133 447 aa10.44□□□□□ -0.74
CIT-211ENST00000541841 WIPF1O43516 503 aa10.43□□□□□ -0.74
CIT-211ENST00000541841 KDF1Q8NAX2 398 aaPredicted RBP10.42□□□□□ -0.74
CIT-211ENST00000541841 ADH1AP07327 375 aa10.41□□□□□ -0.74
CIT-211ENST00000541841 NPAS3Q8IXF0 933 aa10.41□□□□□ -0.74
CIT-211ENST00000541841 IRF7Q92985 503 aa10.41□□□□□ -0.74
CIT-211ENST00000541841 POLMQ9NP87 494 aaPredicted RBP10.41□□□□□ -0.74
CIT-211ENST00000541841 PPFIA3O75145 1194 aa10.4□□□□□ -0.74
CIT-211ENST00000541841 PTSQ03393 145 aa10.39□□□□□ -0.75
CIT-211ENST00000541841 SOCS7O14512 581 aa10.38□□□□□ -0.75
CIT-211ENST00000541841 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.38□□□□□ -0.75
CIT-211ENST00000541841 SEPT12Q8IYM1 358 aa10.38□□□□□ -0.75
CIT-211ENST00000541841 PTGIRP43119 386 aa10.37□□□□□ -0.75
CIT-211ENST00000541841 SCTRP47872 440 aa10.37□□□□□ -0.75
CIT-211ENST00000541841 IRF5Q13568 498 aa10.36□□□□□ -0.75
CIT-211ENST00000541841 FOXD4L5Q5VV16 416 aaPredicted RBP10.36□□□□□ -0.75
CIT-211ENST00000541841 RNF217Q8TC41 542 aa10.36□□□□□ -0.75
CIT-211ENST00000541841 GDPD2Q9HCC8 539 aa10.36□□□□□ -0.75
CIT-211ENST00000541841 APBB1O00213 710 aa10.35□□□□□ -0.75
CIT-211ENST00000541841 PCDHB11Q9Y5F2 797 aa10.35□□□□□ -0.75
CIT-211ENST00000541841 INSM1Q01101 510 aaPredicted RBP10.34□□□□□ -0.75
CIT-211ENST00000541841 ABL2P42684 1182 aa10.33□□□□□ -0.76
CIT-211ENST00000541841 VAC14Q08AM6 782 aa10.33□□□□□ -0.76
CIT-211ENST00000541841 ZNF330Q9Y3S2 320 aaPredicted RBP10.33□□□□□ -0.76
CIT-211ENST00000541841 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
CIT-211ENST00000541841 MEN1O00255 615 aa10.32□□□□□ -0.76
CIT-211ENST00000541841 ERVK-9P63128 1117 aa10.32□□□□□ -0.76
CIT-211ENST00000541841 CC2D2BQ6DHV5 1058 aa10.32□□□□□ -0.76
CIT-211ENST00000541841 CCDC155Q8N6L0 562 aa10.32□□□□□ -0.76
CIT-211ENST00000541841 GPR161Q8N6U8 529 aaKnown RBP10.32□□□□□ -0.76
CIT-211ENST00000541841 CDCA7Q9BWT1 371 aaPredicted RBP10.32□□□□□ -0.76
CIT-211ENST00000541841 TIMELESSQ9UNS1 1208 aa10.32□□□□□ -0.76
CIT-211ENST00000541841 VSIG8P0DPA2 414 aa10.31□□□□□ -0.76
CIT-211ENST00000541841 LORP23490 312 aaPredicted RBP10.31□□□□□ -0.76
CIT-211ENST00000541841 MCM6Q14566 821 aa10.31□□□□□ -0.76
CIT-211ENST00000541841 RNF20Q5VTR2 975 aa10.31□□□□□ -0.76
CIT-211ENST00000541841 CCDC85AQ96PX6 553 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms