RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 COL5A2P05997 1499 aaPredicted RBP14.65□□□□□ -0.06
CHFR-220ENST00000541817 GPBP1L1Q9HC44 474 aaPredicted RBP14.65□□□□□ -0.06
CHFR-220ENST00000541817 ZNF827Q17R98 1081 aa14.64□□□□□ -0.07
CHFR-220ENST00000541817 AKAP12Q02952 1782 aa14.63□□□□□ -0.07
CHFR-220ENST00000541817 COL13A1Q5TAT6 717 aaPredicted RBP14.63□□□□□ -0.07
CHFR-220ENST00000541817 ABTB2Q8N961 1025 aa14.63□□□□□ -0.07
CHFR-220ENST00000541817 CRB1P82279 1406 aa14.63□□□□□ -0.07
CHFR-220ENST00000541817 TOM1L2Q6ZVM7 507 aa14.62□□□□□ -0.07
CHFR-220ENST00000541817 NUDT16Q96DE0 195 aaKnown RBP14.62□□□□□ -0.07
CHFR-220ENST00000541817 ACSBG1Q96GR2 724 aa14.62□□□□□ -0.07
CHFR-220ENST00000541817 CPDO75976 1380 aa14.6□□□□□ -0.07
CHFR-220ENST00000541817 EIF3AQ14152 1382 aaKnown RBP14.6□□□□□ -0.07
CHFR-220ENST00000541817 TOPAZ1Q8N9V7 1692 aa14.59□□□□□ -0.07
CHFR-220ENST00000541817 GCP02774 474 aa14.59□□□□□ -0.07
CHFR-220ENST00000541817 POLD1P28340 1107 aa14.59□□□□□ -0.07
CHFR-220ENST00000541817 ACEP12821 1306 aa14.59□□□□□ -0.07
CHFR-220ENST00000541817 WNK3Q9BYP7 1800 aa14.59□□□□□ -0.07
CHFR-220ENST00000541817 USP19O94966 1318 aa14.58□□□□□ -0.08
CHFR-220ENST00000541817 PAPPAQ13219 1627 aa14.58□□□□□ -0.08
CHFR-220ENST00000541817 ITSN1Q15811 1721 aa14.58□□□□□ -0.08
CHFR-220ENST00000541817 GRIN3BO60391 1043 aa14.57□□□□□ -0.08
CHFR-220ENST00000541817 LRRC4BQ9NT99 713 aa14.57□□□□□ -0.08
CHFR-220ENST00000541817 DNAJC5GQ8N7S2 189 aa14.56□□□□□ -0.08
CHFR-220ENST00000541817 KCNQ4P56696 695 aa14.55□□□□□ -0.08
CHFR-220ENST00000541817 NLRP13Q86W25 1043 aa14.55□□□□□ -0.08
CHFR-220ENST00000541817 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
CHFR-220ENST00000541817 EXOC5O00471 708 aa14.54□□□□□ -0.08
CHFR-220ENST00000541817 CDK19Q9BWU1 502 aa14.54□□□□□ -0.08
CHFR-220ENST00000541817 WWC3Q9ULE0 1092 aa14.54□□□□□ -0.08
CHFR-220ENST00000541817 AATKQ6ZMQ8 1374 aa14.54□□□□□ -0.08
CHFR-220ENST00000541817 BCL9O00512 1426 aa14.54□□□□□ -0.08
CHFR-220ENST00000541817 ADGRB1O14514 1584 aa14.54□□□□□ -0.08
CHFR-220ENST00000541817 PNPLA7Q6ZV29 1317 aa14.53□□□□□ -0.08
CHFR-220ENST00000541817 KIF3CO14782 793 aa14.53□□□□□ -0.08
CHFR-220ENST00000541817 RGPD5Q99666 1765 aa14.52□□□□□ -0.08
CHFR-220ENST00000541817 POLR3AO14802 1390 aaPredicted RBP14.52□□□□□ -0.08
CHFR-220ENST00000541817 APLP1P51693 650 aa14.52□□□□□ -0.09
CHFR-220ENST00000541817 HTRA3P83110 453 aa14.52□□□□□ -0.09
CHFR-220ENST00000541817 TNS4Q8IZW8 715 aa14.52□□□□□ -0.09
CHFR-220ENST00000541817 AKT1S1Q96B36 256 aa14.52□□□□□ -0.09
CHFR-220ENST00000541817 KAT6BQ8WYB5 2073 aa14.52□□□□□ -0.09
CHFR-220ENST00000541817 TUBGCP6Q96RT7 1819 aa14.52□□□□□ -0.09
CHFR-220ENST00000541817 COL24A1Q17RW2 1714 aa14.52□□□□□ -0.09
CHFR-220ENST00000541817 ADCY9O60503 1353 aa14.51□□□□□ -0.09
CHFR-220ENST00000541817 WDR17Q8IZU2 1322 aa14.51□□□□□ -0.09
CHFR-220ENST00000541817 BTAF1O14981 1849 aa14.51□□□□□ -0.09
CHFR-220ENST00000541817 PRELPP51888 382 aa14.51□□□□□ -0.09
CHFR-220ENST00000541817 SLC16A10Q8TF71 515 aa14.51□□□□□ -0.09
CHFR-220ENST00000541817 MPHOSPH9Q99550 1183 aa14.51□□□□□ -0.09
CHFR-220ENST00000541817 NHSQ6T4R5 1651 aa14.51□□□□□ -0.09
CHFR-220ENST00000541817 COL18A1P39060 1754 aa14.5□□□□□ -0.09
CHFR-220ENST00000541817 CSB-PGBD3P0DP91 1061 aa14.5□□□□□ -0.09
CHFR-220ENST00000541817 KDM2AQ9Y2K7 1162 aa14.5□□□□□ -0.09
CHFR-220ENST00000541817 NLRP6P59044 892 aa14.49□□□□□ -0.09
CHFR-220ENST00000541817 MSL1Q68DK7 614 aa14.49□□□□□ -0.09
CHFR-220ENST00000541817 CDCA7Q9BWT1 371 aaPredicted RBP14.49□□□□□ -0.09
CHFR-220ENST00000541817 TFCP2L1Q9NZI6 479 aa14.49□□□□□ -0.09
CHFR-220ENST00000541817 USP6P35125 1406 aa14.49□□□□□ -0.09
CHFR-220ENST00000541817 SOX12O15370 315 aa14.48□□□□□ -0.09
CHFR-220ENST00000541817 MSH5O43196 834 aa14.48□□□□□ -0.09
CHFR-220ENST00000541817 CCDC61Q9Y6R9 512 aa14.48□□□□□ -0.09
CHFR-220ENST00000541817 PLEKHG3A1L390 1219 aa14.47□□□□□ -0.09
CHFR-220ENST00000541817 BRD4O60885 1362 aaPredicted RBP14.47□□□□□ -0.09
CHFR-220ENST00000541817 CARD10Q9BWT7 1032 aa14.46□□□□□ -0.09
CHFR-220ENST00000541817 QSER1Q2KHR3 1735 aa14.46□□□□□ -0.1
CHFR-220ENST00000541817 ARHGEF28Q8N1W1 1705 aaKnown RBP14.46□□□□□ -0.1
CHFR-220ENST00000541817 TNS2Q63HR2 1409 aa14.44□□□□□ -0.1
CHFR-220ENST00000541817 SLC34A2O95436 690 aa14.43□□□□□ -0.1
CHFR-220ENST00000541817 WDR90Q96KV7 1748 aa14.43□□□□□ -0.1
CHFR-220ENST00000541817 SLIT3O75094 1523 aa14.42□□□□□ -0.1
CHFR-220ENST00000541817 COL23A1Q86Y22 540 aaPredicted RBP14.41□□□□□ -0.1
CHFR-220ENST00000541817 KLRG1Q96E93 195 aa14.41□□□□□ -0.1
CHFR-220ENST00000541817 CPSF1Q10570 1443 aaKnown RBP14.41□□□□□ -0.1
CHFR-220ENST00000541817 PPIP5K1Q6PFW1 1433 aa14.41□□□□□ -0.1
CHFR-220ENST00000541817 ARHGEF25Q86VW2 580 aa14.4□□□□□ -0.1
CHFR-220ENST00000541817 CABP2Q9NPB3 220 aa14.4□□□□□ -0.1
CHFR-220ENST00000541817 TOMM70O94826 608 aa14.39□□□□□ -0.11
CHFR-220ENST00000541817 SRPK2P78362 688 aaKnown RBP14.39□□□□□ -0.11
CHFR-220ENST00000541817 DCAF11Q8TEB1 546 aa14.39□□□□□ -0.11
CHFR-220ENST00000541817 SLC27A3Q5K4L6 730 aa14.38□□□□□ -0.11
CHFR-220ENST00000541817 JMYQ8N9B5 988 aa14.38□□□□□ -0.11
CHFR-220ENST00000541817 NMRK2Q9NPI5 230 aa14.38□□□□□ -0.11
CHFR-220ENST00000541817 CCDC7Q96M83 1385 aa14.37□□□□□ -0.11
CHFR-220ENST00000541817 ABCC6O95255 1503 aa14.37□□□□□ -0.11
CHFR-220ENST00000541817 PIK3C2AO00443 1686 aa14.37□□□□□ -0.11
CHFR-220ENST00000541817 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
CHFR-220ENST00000541817 CD2APQ9Y5K6 639 aa14.37□□□□□ -0.11
CHFR-220ENST00000541817 IGSF1Q8N6C5 1336 aa14.37□□□□□ -0.11
CHFR-220ENST00000541817 TRPM1Q7Z4N2 1603 aa14.37□□□□□ -0.11
CHFR-220ENST00000541817 NLRP2Q9NX02 1062 aa14.36□□□□□ -0.11
CHFR-220ENST00000541817 CABP1Q9NZU7 370 aa14.36□□□□□ -0.11
CHFR-220ENST00000541817 DDX54Q8TDD1 881 aaKnown RBP14.35□□□□□ -0.11
CHFR-220ENST00000541817 IL2RBP14784 551 aa14.34□□□□□ -0.11
CHFR-220ENST00000541817 PRIM1P49642 420 aaKnown RBP14.33□□□□□ -0.12
CHFR-220ENST00000541817 CCNL1Q9UK58 526 aaPredicted RBP14.33□□□□□ -0.12
CHFR-220ENST00000541817 SMIM5Q71RC9 77 aa14.32□□□□□ -0.12
CHFR-220ENST00000541817 HSPA1AP0DMV8 641 aaKnown RBP14.31□□□□□ -0.12
CHFR-220ENST00000541817 HSPA1BP0DMV9 641 aaKnown RBP14.31□□□□□ -0.12
CHFR-220ENST00000541817 LY75O60449 1722 aa14.31□□□□□ -0.12
CHFR-220ENST00000541817 KCNH5Q8NCM2 988 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms