RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 ABTB2Q8N961 1025 aa8.77□□□□□ -1.01
VEGFB-203ENST00000541681 CCDC61Q9Y6R9 512 aa8.77□□□□□ -1.01
VEGFB-203ENST00000541681 SPATA31A5Q5VU36 1347 aa8.77□□□□□ -1.01
VEGFB-203ENST00000541681 SPATA31A7Q8IWB4 1347 aa8.77□□□□□ -1.01
VEGFB-203ENST00000541681 AKAP12Q02952 1782 aa8.76□□□□□ -1.01
VEGFB-203ENST00000541681 NEFLP07196 543 aa8.76□□□□□ -1.01
VEGFB-203ENST00000541681 PPP2R1AP30153 589 aa8.76□□□□□ -1.01
VEGFB-203ENST00000541681 BAG6P46379 1132 aa8.76□□□□□ -1.01
VEGFB-203ENST00000541681 EVA1CP58658 441 aa8.76□□□□□ -1.01
VEGFB-203ENST00000541681 SUPT16HQ9Y5B9 1047 aaKnown RBP8.76□□□□□ -1.01
VEGFB-203ENST00000541681 TNS1Q9HBL0 1735 aaKnown RBP8.76□□□□□ -1.01
VEGFB-203ENST00000541681 SSH2Q76I76 1423 aa8.75□□□□□ -1.01
VEGFB-203ENST00000541681 SMG6Q86US8 1419 aaKnown RBP8.75□□□□□ -1.01
VEGFB-203ENST00000541681 PSDA5PKW4 1024 aaPredicted RBP8.75□□□□□ -1.01
VEGFB-203ENST00000541681 CARD14Q9BXL6 1004 aa8.75□□□□□ -1.01
VEGFB-203ENST00000541681 PIK3C2AO00443 1686 aa8.75□□□□□ -1.01
VEGFB-203ENST00000541681 LMO7Q8WWI1 1683 aa8.75□□□□□ -1.01
VEGFB-203ENST00000541681 ANKRD36BQ8N2N9 1353 aa8.74□□□□□ -1.01
VEGFB-203ENST00000541681 SOX12O15370 315 aa8.74□□□□□ -1.01
VEGFB-203ENST00000541681 ERICH6BQ5W0A0 696 aa8.74□□□□□ -1.01
VEGFB-203ENST00000541681 SLC12A5Q9H2X9 1139 aa8.74□□□□□ -1.01
VEGFB-203ENST00000541681 SPATA31A1Q5TZJ5 1347 aa8.74□□□□□ -1.01
VEGFB-203ENST00000541681 MON2Q7Z3U7 1717 aa8.74□□□□□ -1.01
VEGFB-203ENST00000541681 NSD2O96028 1365 aa8.73□□□□□ -1.01
VEGFB-203ENST00000541681 USP6P35125 1406 aa8.73□□□□□ -1.01
VEGFB-203ENST00000541681 CAMTA1Q9Y6Y1 1673 aa8.73□□□□□ -1.01
VEGFB-203ENST00000541681 PLEKHG3A1L390 1219 aa8.73□□□□□ -1.01
VEGFB-203ENST00000541681 ONECUT3O60422 494 aaPredicted RBP8.73□□□□□ -1.01
VEGFB-203ENST00000541681 PDE3BQ13370 1112 aa8.73□□□□□ -1.01
VEGFB-203ENST00000541681 LARP1Q6PKG0 1096 aaKnown RBP8.73□□□□□ -1.01
VEGFB-203ENST00000541681 USP19O94966 1318 aa8.73□□□□□ -1.01
VEGFB-203ENST00000541681 NSD3Q9BZ95 1437 aa8.72□□□□□ -1.01
VEGFB-203ENST00000541681 COL5A2P05997 1499 aaPredicted RBP8.72□□□□□ -1.01
VEGFB-203ENST00000541681 EN1Q05925 392 aaPredicted RBP8.72□□□□□ -1.01
VEGFB-203ENST00000541681 FKBP8Q14318 412 aa8.72□□□□□ -1.01
VEGFB-203ENST00000541681 CABP1Q9NZU7 370 aa8.72□□□□□ -1.01
VEGFB-203ENST00000541681 NUDCQ9Y266 331 aa8.72□□□□□ -1.01
VEGFB-203ENST00000541681 CGNL1Q0VF96 1302 aa8.72□□□□□ -1.01
VEGFB-203ENST00000541681 SLIT3O75094 1523 aa8.71□□□□□ -1.01
VEGFB-203ENST00000541681 TRIM37O94972 964 aa8.71□□□□□ -1.02
VEGFB-203ENST00000541681 NLRP6P59044 892 aa8.71□□□□□ -1.02
VEGFB-203ENST00000541681 LRP5O75197 1615 aa8.71□□□□□ -1.02
VEGFB-203ENST00000541681 CPDO75976 1380 aa8.71□□□□□ -1.02
VEGFB-203ENST00000541681 WNK3Q9BYP7 1800 aa8.7□□□□□ -1.02
VEGFB-203ENST00000541681 LRRC37A3O60309 1634 aa8.7□□□□□ -1.02
VEGFB-203ENST00000541681 GCP02774 474 aa8.7□□□□□ -1.02
VEGFB-203ENST00000541681 WDR43Q15061 677 aaKnown RBP eCLIP8.7□□□□□ -1.02
VEGFB-203ENST00000541681 TCP11L2Q8N4U5 519 aa8.7□□□□□ -1.02
VEGFB-203ENST00000541681 TERF2IPQ9NYB0 399 aa8.7□□□□□ -1.02
VEGFB-203ENST00000541681 CD163L1Q9NR16 1453 aa8.7□□□□□ -1.02
VEGFB-203ENST00000541681 NUP188Q5SRE5 1749 aa8.69□□□□□ -1.02
VEGFB-203ENST00000541681 PARP4Q9UKK3 1724 aaKnown RBP8.69□□□□□ -1.02
VEGFB-203ENST00000541681 RGPD5Q99666 1765 aa8.69□□□□□ -1.02
VEGFB-203ENST00000541681 APBA3O96018 575 aa8.69□□□□□ -1.02
VEGFB-203ENST00000541681 R3HDM1Q15032 1099 aaKnown RBP8.69□□□□□ -1.02
VEGFB-203ENST00000541681 EZH2Q15910 746 aaKnown RBP8.69□□□□□ -1.02
VEGFB-203ENST00000541681 FAM196AQ6ZSG2 479 aa8.69□□□□□ -1.02
VEGFB-203ENST00000541681 TOM1L2Q6ZVM7 507 aa8.69□□□□□ -1.02
VEGFB-203ENST00000541681 MORC1Q86VD1 984 aa8.69□□□□□ -1.02
VEGFB-203ENST00000541681 PELP1Q8IZL8 1130 aaKnown RBP8.69□□□□□ -1.02
VEGFB-203ENST00000541681 NGEFQ8N5V2 710 aa8.69□□□□□ -1.02
VEGFB-203ENST00000541681 ADAMTS8Q9UP79 889 aa8.69□□□□□ -1.02
VEGFB-203ENST00000541681 CRB1P82279 1406 aa8.69□□□□□ -1.02
VEGFB-203ENST00000541681 CPSF1Q10570 1443 aaKnown RBP8.69□□□□□ -1.02
VEGFB-203ENST00000541681 CSB-PGBD3P0DP91 1061 aa8.68□□□□□ -1.02
VEGFB-203ENST00000541681 HDGFL2Q7Z4V5 671 aaPredicted RBP8.68□□□□□ -1.02
VEGFB-203ENST00000541681 A0A1W2PP64 1363 aa8.68□□□□□ -1.02
VEGFB-203ENST00000541681 RREB1Q92766 1687 aa8.68□□□□□ -1.02
VEGFB-203ENST00000541681 DISP2A7MBM2 1401 aa8.67□□□□□ -1.02
VEGFB-203ENST00000541681 RNF123Q5XPI4 1314 aa8.67□□□□□ -1.02
VEGFB-203ENST00000541681 BARGINQ6ZT62 677 aa8.67□□□□□ -1.02
VEGFB-203ENST00000541681 LTN1O94822 1766 aa8.66□□□□□ -1.02
VEGFB-203ENST00000541681 COL18A1P39060 1754 aa8.66□□□□□ -1.02
VEGFB-203ENST00000541681 OVOS2A0A0G2JMS6 1433 aa8.66□□□□□ -1.02
VEGFB-203ENST00000541681 OVOS2A0A0J9YW53 1432 aa8.66□□□□□ -1.02
VEGFB-203ENST00000541681 OVOS2Q6IE36 1432 aa8.66□□□□□ -1.02
VEGFB-203ENST00000541681 AATKQ6ZMQ8 1374 aa8.66□□□□□ -1.02
VEGFB-203ENST00000541681 TTC21BQ7Z4L5 1316 aa8.66□□□□□ -1.02
VEGFB-203ENST00000541681 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.66□□□□□ -1.02
VEGFB-203ENST00000541681 NFAT5O94916 1531 aa8.65□□□□□ -1.02
VEGFB-203ENST00000541681 TTC21AQ8NDW8 1320 aa8.65□□□□□ -1.02
VEGFB-203ENST00000541681 CFAP53Q96M91 514 aa8.65□□□□□ -1.02
VEGFB-203ENST00000541681 THRAP3Q9Y2W1 955 aaKnown RBP8.65□□□□□ -1.02
VEGFB-203ENST00000541681 PEAK1Q9H792 1746 aa8.65□□□□□ -1.03
VEGFB-203ENST00000541681 DLG5Q8TDM6 1919 aa8.64□□□□□ -1.03
VEGFB-203ENST00000541681 WDR17Q8IZU2 1322 aa8.64□□□□□ -1.03
VEGFB-203ENST00000541681 FYB1O15117 783 aa8.64□□□□□ -1.03
VEGFB-203ENST00000541681 DDB1Q16531 1140 aa8.64□□□□□ -1.03
VEGFB-203ENST00000541681 NCBP3Q53F19 620 aaKnown RBP8.64□□□□□ -1.03
VEGFB-203ENST00000541681 NME9Q86XW9 330 aa8.64□□□□□ -1.03
VEGFB-203ENST00000541681 KCNH5Q8NCM2 988 aa8.64□□□□□ -1.03
VEGFB-203ENST00000541681 CAMKK2Q96RR4 588 aa8.64□□□□□ -1.03
VEGFB-203ENST00000541681 SBF2Q86WG5 1849 aa8.64□□□□□ -1.03
VEGFB-203ENST00000541681 EDC4Q6P2E9 1401 aaKnown RBP8.63□□□□□ -1.03
VEGFB-203ENST00000541681 MTHFSP49914 203 aa8.63□□□□□ -1.03
VEGFB-203ENST00000541681 ZNF692Q9BU19 519 aaPredicted RBP8.63□□□□□ -1.03
VEGFB-203ENST00000541681 AXIN2Q9Y2T1 843 aa8.63□□□□□ -1.03
VEGFB-203ENST00000541681 ZNF521Q96K83 1311 aa8.62□□□□□ -1.03
VEGFB-203ENST00000541681 NBPF14Q5TI25 921 aa8.62□□□□□ -1.03
VEGFB-203ENST00000541681 ARHGEF25Q86VW2 580 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms