RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 PLEKHF1Q96S99 279 aa13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 KNDC1Q76NI1 1749 aa13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 CHD2O14647 1828 aaKnown RBP13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 CPS1P31327 1500 aa13.28□□□□□ -0.28
PHACTR3-209ENST00000541461 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
PHACTR3-209ENST00000541461 ATF7IPQ6VMQ6 1270 aa13.28□□□□□ -0.28
PHACTR3-209ENST00000541461 CHMP5Q9NZZ3 219 aa13.28□□□□□ -0.28
PHACTR3-209ENST00000541461 DDX19BQ9UMR2 479 aa13.28□□□□□ -0.28
PHACTR3-209ENST00000541461 GOLGA6L3A6NEY3 463 aa13.28□□□□□ -0.28
PHACTR3-209ENST00000541461 CT47B1P0C2W7 299 aaPredicted RBP13.28□□□□□ -0.28
PHACTR3-209ENST00000541461 CDK19Q9BWU1 502 aa13.28□□□□□ -0.28
PHACTR3-209ENST00000541461 GGNBP2Q9H3C7 697 aa13.28□□□□□ -0.28
PHACTR3-209ENST00000541461 TMEM57Q8N5G2 664 aa13.27□□□□□ -0.28
PHACTR3-209ENST00000541461 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.27□□□□□ -0.29
PHACTR3-209ENST00000541461 PTCH1Q13635 1447 aa13.27□□□□□ -0.29
PHACTR3-209ENST00000541461 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.29
PHACTR3-209ENST00000541461 FSD2A1L4K1 749 aa13.27□□□□□ -0.29
PHACTR3-209ENST00000541461 PANK2Q9BZ23 570 aa13.27□□□□□ -0.29
PHACTR3-209ENST00000541461 NSD2O96028 1365 aa13.26□□□□□ -0.29
PHACTR3-209ENST00000541461 ZNF335Q9H4Z2 1342 aaPredicted RBP13.26□□□□□ -0.29
PHACTR3-209ENST00000541461 TRAK2O60296 914 aa13.26□□□□□ -0.29
PHACTR3-209ENST00000541461 SMC5Q8IY18 1101 aa13.26□□□□□ -0.29
PHACTR3-209ENST00000541461 PROSER2Q86WR7 435 aaPredicted RBP13.25□□□□□ -0.29
PHACTR3-209ENST00000541461 PUS7Q96PZ0 661 aaKnown RBP13.25□□□□□ -0.29
PHACTR3-209ENST00000541461 RIPK4P57078 832 aa13.24□□□□□ -0.29
PHACTR3-209ENST00000541461 HSCBQ8IWL3 235 aa13.24□□□□□ -0.29
PHACTR3-209ENST00000541461 ZBTB40Q9NUA8 1239 aa13.24□□□□□ -0.29
PHACTR3-209ENST00000541461 STRCP1A6NGW2 1772 aa13.24□□□□□ -0.29
PHACTR3-209ENST00000541461 A0A1W2PP64 1363 aa13.24□□□□□ -0.29
PHACTR3-209ENST00000541461 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
PHACTR3-209ENST00000541461 ZNF692Q9BU19 519 aaPredicted RBP13.24□□□□□ -0.29
PHACTR3-209ENST00000541461 C14orf37Q86TY3 774 aa13.23□□□□□ -0.29
PHACTR3-209ENST00000541461 LNPKQ9C0E8 428 aa13.23□□□□□ -0.29
PHACTR3-209ENST00000541461 NWD1Q149M9 1564 aa13.22□□□□□ -0.29
PHACTR3-209ENST00000541461 KCNA4P22459 653 aa13.22□□□□□ -0.29
PHACTR3-209ENST00000541461 NUCB1Q02818 461 aa13.22□□□□□ -0.29
PHACTR3-209ENST00000541461 COL3A1P02461 1466 aaPredicted RBP13.22□□□□□ -0.29
PHACTR3-209ENST00000541461 FYB1O15117 783 aa13.21□□□□□ -0.29
PHACTR3-209ENST00000541461 HOMEZQ8IX15 550 aa13.21□□□□□ -0.29
PHACTR3-209ENST00000541461 CABP1Q9NZU7 370 aa13.21□□□□□ -0.29
PHACTR3-209ENST00000541461 IL16Q14005 1332 aa13.21□□□□□ -0.3
PHACTR3-209ENST00000541461 PRR36Q9H6K5 1346 aa13.21□□□□□ -0.3
PHACTR3-209ENST00000541461 TMEM94Q12767 1356 aa13.2□□□□□ -0.3
PHACTR3-209ENST00000541461 IPO8O15397 1037 aaKnown RBP13.2□□□□□ -0.3
PHACTR3-209ENST00000541461 RBM25P49756 843 aaKnown RBP13.2□□□□□ -0.3
PHACTR3-209ENST00000541461 DDIT3P35638 169 aa13.19□□□□□ -0.3
PHACTR3-209ENST00000541461 CHD1LQ86WJ1 897 aa13.19□□□□□ -0.3
PHACTR3-209ENST00000541461 NUDT16Q96DE0 195 aaKnown RBP13.19□□□□□ -0.3
PHACTR3-209ENST00000541461 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
PHACTR3-209ENST00000541461 DIAPH1O60610 1272 aaKnown RBP13.19□□□□□ -0.3
PHACTR3-209ENST00000541461 PODXL2Q9NZ53 605 aa13.19□□□□□ -0.3
PHACTR3-209ENST00000541461 KIF16BQ96L93 1317 aa13.19□□□□□ -0.3
PHACTR3-209ENST00000541461 NCOA3Q9Y6Q9 1424 aa13.18□□□□□ -0.3
PHACTR3-209ENST00000541461 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
PHACTR3-209ENST00000541461 RGPD8O14715 1765 aaPredicted RBP13.18□□□□□ -0.3
PHACTR3-209ENST00000541461 MRE11P49959 708 aa13.18□□□□□ -0.3
PHACTR3-209ENST00000541461 TNPO1Q92973 898 aaKnown RBP13.18□□□□□ -0.3
PHACTR3-209ENST00000541461 SNX21Q969T3 373 aa13.18□□□□□ -0.3
PHACTR3-209ENST00000541461 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
PHACTR3-209ENST00000541461 ANKRD45Q5TZF3 282 aa13.17□□□□□ -0.3
PHACTR3-209ENST00000541461 C19orf44Q9H6X5 657 aa13.17□□□□□ -0.3
PHACTR3-209ENST00000541461 GRPEL1Q9HAV7 217 aa13.17□□□□□ -0.3
PHACTR3-209ENST00000541461 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
PHACTR3-209ENST00000541461 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
PHACTR3-209ENST00000541461 HSP90AB1P08238 724 aaKnown RBP13.16□□□□□ -0.3
PHACTR3-209ENST00000541461 FBLN1P23142 703 aa13.16□□□□□ -0.3
PHACTR3-209ENST00000541461 ALDH1L2Q3SY69 923 aa13.16□□□□□ -0.3
PHACTR3-209ENST00000541461 UBE2Q2Q8WVN8 375 aa13.16□□□□□ -0.3
PHACTR3-209ENST00000541461 KIF2CQ99661 725 aa13.16□□□□□ -0.3
PHACTR3-209ENST00000541461 TERF2IPQ9NYB0 399 aa13.16□□□□□ -0.3
PHACTR3-209ENST00000541461 ATAD2Q6PL18 1390 aa13.16□□□□□ -0.3
PHACTR3-209ENST00000541461 CD2BP2O95400 341 aaKnown RBP13.16□□□□□ -0.3
PHACTR3-209ENST00000541461 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
PHACTR3-209ENST00000541461 ATP7BP35670 1465 aa13.15□□□□□ -0.3
PHACTR3-209ENST00000541461 LRRC7Q96NW7 1537 aa13.15□□□□□ -0.3
PHACTR3-209ENST00000541461 BMP2KLQ5H9B9 411 aa13.15□□□□□ -0.3
PHACTR3-209ENST00000541461 CD163L1Q9NR16 1453 aa13.15□□□□□ -0.3
PHACTR3-209ENST00000541461 ZBTB7BO15156 539 aaPredicted RBP13.14□□□□□ -0.31
PHACTR3-209ENST00000541461 THUMPD2Q9BTF0 503 aaKnown RBP13.14□□□□□ -0.31
PHACTR3-209ENST00000541461 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
PHACTR3-209ENST00000541461 ANKRD26Q9UPS8 1709 aa13.14□□□□□ -0.31
PHACTR3-209ENST00000541461 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
PHACTR3-209ENST00000541461 CLCN1P35523 988 aa13.14□□□□□ -0.31
PHACTR3-209ENST00000541461 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
PHACTR3-209ENST00000541461 PNNQ9H307 717 aaKnown RBP13.14□□□□□ -0.31
PHACTR3-209ENST00000541461 GAS2L3Q86XJ1 694 aa13.13□□□□□ -0.31
PHACTR3-209ENST00000541461 PNPLA6Q8IY17 1366 aa13.13□□□□□ -0.31
PHACTR3-209ENST00000541461 ELL2O00472 640 aaPredicted RBP13.13□□□□□ -0.31
PHACTR3-209ENST00000541461 FCHSD2O94868 740 aa13.13□□□□□ -0.31
PHACTR3-209ENST00000541461 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
PHACTR3-209ENST00000541461 TSPYL6Q8N831 410 aa13.13□□□□□ -0.31
PHACTR3-209ENST00000541461 NAP1L5Q96NT1 182 aaPredicted RBP13.13□□□□□ -0.31
PHACTR3-209ENST00000541461 VAMP4O75379 141 aa13.12□□□□□ -0.31
PHACTR3-209ENST00000541461 ATF3P18847 181 aa13.12□□□□□ -0.31
PHACTR3-209ENST00000541461 TBC1D9Q6ZT07 1266 aa13.12□□□□□ -0.31
PHACTR3-209ENST00000541461 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
PHACTR3-209ENST00000541461 PHACTR3Q96KR7 559 aa13.12□□□□□ -0.31
PHACTR3-209ENST00000541461 MSH6P52701 1360 aa13.12□□□□□ -0.31
PHACTR3-209ENST00000541461 XIRP1Q702N8 1843 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms