RNA–Protein interactions for RNA: ENST00000540870.5

SP110-215, Transcript of SP110 nuclear body protein, human

TSL 2 BASIC

Gene SP110, Length 2,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SP110-215	ENST00000540870	CABLES1	Q8TDN4	633 aa		11.26	□□□□□ -0.61
SP110-215	ENST00000540870	NHSL1	Q5SYE7	1610 aa		11.26	□□□□□ -0.61
SP110-215	ENST00000540870	SHPRH	Q149N8	1683 aa		11.26	□□□□□ -0.61
SP110-215	ENST00000540870	ARHGEF10	O15013	1369 aa		11.26	□□□□□ -0.61
SP110-215	ENST00000540870	LTN1	O94822	1766 aa		11.26	□□□□□ -0.61
SP110-215	ENST00000540870	HAP1	P54257	671 aa	Predicted RBP	11.26	□□□□□ -0.61
SP110-215	ENST00000540870	CERK	Q8TCT0	537 aa		11.26	□□□□□ -0.61
SP110-215	ENST00000540870	PNPLA6	Q8IY17	1366 aa		11.26	□□□□□ -0.61
SP110-215	ENST00000540870	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.26	□□□□□ -0.61
SP110-215	ENST00000540870	HSP90AB2P	Q58FF8	381 aa		11.25	□□□□□ -0.61
SP110-215	ENST00000540870	SMG6	Q86US8	1419 aa	Known RBP	11.25	□□□□□ -0.61
SP110-215	ENST00000540870	PEAK1	Q9H792	1746 aa		11.25	□□□□□ -0.61
SP110-215	ENST00000540870	DEK	P35659	375 aa	Known RBP	11.25	□□□□□ -0.61
SP110-215	ENST00000540870	ZC3H6	P61129	1189 aa	Known RBP	11.25	□□□□□ -0.61
SP110-215	ENST00000540870	COL3A1	P02461	1466 aa	Predicted RBP	11.24	□□□□□ -0.61
SP110-215	ENST00000540870	USP19	O94966	1318 aa		11.24	□□□□□ -0.61
SP110-215	ENST00000540870	FLT4	P35916	1363 aa		11.24	□□□□□ -0.61
SP110-215	ENST00000540870	FGD1	P98174	961 aa		11.24	□□□□□ -0.61
SP110-215	ENST00000540870	LTV1	Q96GA3	475 aa	Predicted RBP	11.24	□□□□□ -0.61
SP110-215	ENST00000540870	INSR	P06213	1382 aa		11.23	□□□□□ -0.61
SP110-215	ENST00000540870	HOXC9	P31274	260 aa		11.23	□□□□□ -0.61
SP110-215	ENST00000540870	LRRC59	Q96AG4	307 aa	Known RBP	11.23	□□□□□ -0.61
SP110-215	ENST00000540870	MED1	Q15648	1581 aa	Predicted RBP	11.23	□□□□□ -0.61
SP110-215	ENST00000540870	SLIT3	O75094	1523 aa		11.23	□□□□□ -0.61
SP110-215	ENST00000540870	NFAT5	O94916	1531 aa		11.23	□□□□□ -0.61
SP110-215	ENST00000540870	IL13	P35225	146 aa		11.23	□□□□□ -0.61
SP110-215	ENST00000540870	EIF4A2	Q14240	407 aa	Known RBP	11.23	□□□□□ -0.61
SP110-215	ENST00000540870	PHLPP1	O60346	1717 aa		11.22	□□□□□ -0.61
SP110-215	ENST00000540870	HMOX1	P09601	288 aa		11.22	□□□□□ -0.61
SP110-215	ENST00000540870	BLM	P54132	1417 aa	Predicted RBP	11.22	□□□□□ -0.61
SP110-215	ENST00000540870	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.21	□□□□□ -0.61
SP110-215	ENST00000540870	ARHGEF25	Q86VW2	580 aa		11.21	□□□□□ -0.61
SP110-215	ENST00000540870	IP6K1	Q92551	441 aa		11.21	□□□□□ -0.61
SP110-215	ENST00000540870	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.21	□□□□□ -0.62
SP110-215	ENST00000540870	RUNDC1	Q96C34	613 aa		11.21	□□□□□ -0.62
SP110-215	ENST00000540870	IQSEC2	Q5JU85	1478 aa		11.21	□□□□□ -0.62
SP110-215	ENST00000540870	APAF1	O14727	1248 aa		11.2	□□□□□ -0.62
SP110-215	ENST00000540870	NEFM	P07197	916 aa		11.2	□□□□□ -0.62
SP110-215	ENST00000540870	PNN	Q9H307	717 aa	Known RBP	11.2	□□□□□ -0.62
SP110-215	ENST00000540870	RTL1	A6NKG5	1358 aa		11.2	□□□□□ -0.62
SP110-215	ENST00000540870	KIF24	Q5T7B8	1368 aa		11.2	□□□□□ -0.62
SP110-215	ENST00000540870	ZBED9	Q6R2W3	1325 aa		11.2	□□□□□ -0.62
SP110-215	ENST00000540870	MAPK8IP3	Q9UPT6	1336 aa		11.2	□□□□□ -0.62
SP110-215	ENST00000540870	NEUROD2	Q15784	382 aa		11.19	□□□□□ -0.62
SP110-215	ENST00000540870	CHRNA2	Q15822	529 aa		11.19	□□□□□ -0.62
SP110-215	ENST00000540870	RGPD5	Q99666	1765 aa		11.19	□□□□□ -0.62
SP110-215	ENST00000540870	FCHSD2	O94868	740 aa		11.19	□□□□□ -0.62
SP110-215	ENST00000540870	SULT6B1	Q6IMI4	303 aa		11.19	□□□□□ -0.62
SP110-215	ENST00000540870	CRYBG1	Q9Y4K1	1723 aa		11.19	□□□□□ -0.62
SP110-215	ENST00000540870	PRKAR2B	P31323	418 aa		11.18	□□□□□ -0.62
SP110-215	ENST00000540870	TAF7L	Q5H9L4	462 aa		11.18	□□□□□ -0.62
SP110-215	ENST00000540870	PRDM11	Q9NQV5	511 aa		11.18	□□□□□ -0.62
SP110-215	ENST00000540870	RRP7A	Q9Y3A4	280 aa	Known RBP	11.18	□□□□□ -0.62
SP110-215	ENST00000540870	KIAA0232	Q92628	1395 aa		11.18	□□□□□ -0.62
SP110-215	ENST00000540870	TCP11L2	Q8N4U5	519 aa		11.18	□□□□□ -0.62
SP110-215	ENST00000540870	FANCI	Q9NVI1	1328 aa		11.17	□□□□□ -0.62
SP110-215	ENST00000540870	AEBP1	Q8IUX7	1158 aa		11.17	□□□□□ -0.62
SP110-215	ENST00000540870	ANKRD24	Q8TF21	1146 aa		11.17	□□□□□ -0.62
SP110-215	ENST00000540870	EYA1	Q99502	592 aa		11.17	□□□□□ -0.62
SP110-215	ENST00000540870	RSPH6A	Q9H0K4	717 aa		11.17	□□□□□ -0.62
SP110-215	ENST00000540870	AXIN2	Q9Y2T1	843 aa		11.17	□□□□□ -0.62
SP110-215	ENST00000540870	RBM19	Q9Y4C8	960 aa	Known RBP	11.17	□□□□□ -0.62
SP110-215	ENST00000540870	COL16A1	Q07092	1604 aa	Predicted RBP	11.16	□□□□□ -0.62
SP110-215	ENST00000540870	ABCA3	Q99758	1704 aa		11.16	□□□□□ -0.62
SP110-215	ENST00000540870	RGPD2	P0DJD1	1756 aa		11.16	□□□□□ -0.62
SP110-215	ENST00000540870	CSB-PGBD3	P0DP91	1061 aa		11.16	□□□□□ -0.62
SP110-215	ENST00000540870	HOMEZ	Q8IX15	550 aa		11.16	□□□□□ -0.62
SP110-215	ENST00000540870	USHBP1	Q8N6Y0	703 aa		11.16	□□□□□ -0.62
SP110-215	ENST00000540870	PLEKHF1	Q96S99	279 aa		11.16	□□□□□ -0.62
SP110-215	ENST00000540870	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.15	□□□□□ -0.62
SP110-215	ENST00000540870	NUTM2E	B1AL46	878 aa	Predicted RBP	11.15	□□□□□ -0.62
SP110-215	ENST00000540870	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.15	□□□□□ -0.62
SP110-215	ENST00000540870	CPD	O75976	1380 aa		11.15	□□□□□ -0.63
SP110-215	ENST00000540870	RGPD1	P0DJD0	1748 aa		11.14	□□□□□ -0.63
SP110-215	ENST00000540870	NBPF6	Q5VWK0	638 aa		11.14	□□□□□ -0.63
SP110-215	ENST00000540870	PHACTR3	Q96KR7	559 aa		11.14	□□□□□ -0.63
SP110-215	ENST00000540870	NBPF4	Q96M43	638 aa		11.14	□□□□□ -0.63
SP110-215	ENST00000540870	IGSF1	Q8N6C5	1336 aa		11.14	□□□□□ -0.63
SP110-215	ENST00000540870	ADAMTS2	O95450	1211 aa		11.13	□□□□□ -0.63
SP110-215	ENST00000540870	TMPO	P42166	694 aa	Known RBP	11.13	□□□□□ -0.63
SP110-215	ENST00000540870	RIPK4	P57078	832 aa		11.13	□□□□□ -0.63
SP110-215	ENST00000540870	NLRP2	Q9NX02	1062 aa		11.13	□□□□□ -0.63
SP110-215	ENST00000540870	COL18A1	P39060	1754 aa		11.13	□□□□□ -0.63
SP110-215	ENST00000540870	FAM83G	A6ND36	823 aa		11.13	□□□□□ -0.63
SP110-215	ENST00000540870	EVA1C	P58658	441 aa		11.13	□□□□□ -0.63
SP110-215	ENST00000540870	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.13	□□□□□ -0.63
SP110-215	ENST00000540870	ERBB3	P21860	1342 aa		11.12	□□□□□ -0.63
SP110-215	ENST00000540870	NGEF	Q8N5V2	710 aa		11.12	□□□□□ -0.63
SP110-215	ENST00000540870	RTN4	Q9NQC3	1192 aa	Known RBP	11.12	□□□□□ -0.63
SP110-215	ENST00000540870	STRN4	Q9NRL3	753 aa		11.12	□□□□□ -0.63
SP110-215	ENST00000540870	HSPA1L	P34931	641 aa		11.11	□□□□□ -0.63
SP110-215	ENST00000540870	AAMP	Q13685	434 aa		11.11	□□□□□ -0.63
SP110-215	ENST00000540870	NFE2L2	Q16236	605 aa		11.11	□□□□□ -0.63
SP110-215	ENST00000540870	WWC1	Q8IX03	1113 aa		11.11	□□□□□ -0.63
SP110-215	ENST00000540870	CDCA7L	Q96GN5	454 aa		11.11	□□□□□ -0.63
SP110-215	ENST00000540870	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.11	□□□□□ -0.63
SP110-215	ENST00000540870	DLG5	Q8TDM6	1919 aa		11.1	□□□□□ -0.63
SP110-215	ENST00000540870	GOLGA2	Q08379	1002 aa		11.1	□□□□□ -0.63
SP110-215	ENST00000540870	PDE3B	Q13370	1112 aa		11.1	□□□□□ -0.63
SP110-215	ENST00000540870	TOM1L2	Q6ZVM7	507 aa		11.1	□□□□□ -0.63

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