RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 OVOS2Q6IE36 1432 aa23.17■■□□□ 1.3
TRIM65-203ENST00000540812 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
TRIM65-203ENST00000540812 PEAK1Q9H792 1746 aa23.17■■□□□ 1.3
TRIM65-203ENST00000540812 DDB1Q16531 1140 aa23.17■■□□□ 1.3
TRIM65-203ENST00000540812 KCNH5Q8NCM2 988 aa23.17■■□□□ 1.3
TRIM65-203ENST00000540812 NFAT5O94916 1531 aa23.16■■□□□ 1.3
TRIM65-203ENST00000540812 CARD11Q9BXL7 1154 aa23.15■■□□□ 1.3
TRIM65-203ENST00000540812 SBNO2Q9Y2G9 1366 aa23.14■■□□□ 1.3
TRIM65-203ENST00000540812 C11orf95C9JLR9 678 aaPredicted RBP23.13■■□□□ 1.29
TRIM65-203ENST00000540812 PTF1AQ7RTS3 328 aa23.13■■□□□ 1.29
TRIM65-203ENST00000540812 MARCH10Q8NA82 808 aaPredicted RBP23.13■■□□□ 1.29
TRIM65-203ENST00000540812 RGPD5Q99666 1765 aa23.13■■□□□ 1.29
TRIM65-203ENST00000540812 WNK3Q9BYP7 1800 aa23.12■■□□□ 1.29
TRIM65-203ENST00000540812 CD163L1Q9NR16 1453 aa23.12■■□□□ 1.29
TRIM65-203ENST00000540812 CSB-PGBD3P0DP91 1061 aa23.12■■□□□ 1.29
TRIM65-203ENST00000540812 NBPF14Q5TI25 921 aa23.12■■□□□ 1.29
TRIM65-203ENST00000540812 MON2Q7Z3U7 1717 aa23.12■■□□□ 1.29
TRIM65-203ENST00000540812 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.12■■□□□ 1.29
TRIM65-203ENST00000540812 CARD10Q9BWT7 1032 aa23.12■■□□□ 1.29
TRIM65-203ENST00000540812 NME9Q86XW9 330 aa23.1■■□□□ 1.29
TRIM65-203ENST00000540812 USP31Q70CQ4 1352 aa23.1■■□□□ 1.29
TRIM65-203ENST00000540812 SBF2Q86WG5 1849 aa23.1■■□□□ 1.29
TRIM65-203ENST00000540812 TMC1Q8TDI8 760 aa23.09■■□□□ 1.29
TRIM65-203ENST00000540812 CDCA7Q9BWT1 371 aaPredicted RBP23.09■■□□□ 1.29
TRIM65-203ENST00000540812 BCL11BQ9C0K0 894 aaPredicted RBP23.08■■□□□ 1.29
TRIM65-203ENST00000540812 SLC12A5Q9H2X9 1139 aa23.08■■□□□ 1.29
TRIM65-203ENST00000540812 PLSCR1O15162 318 aa23.07■■□□□ 1.28
TRIM65-203ENST00000540812 TONSLQ96HA7 1378 aa23.06■■□□□ 1.28
TRIM65-203ENST00000540812 ABCC6O95255 1503 aa23.06■■□□□ 1.28
TRIM65-203ENST00000540812 BCL9O00512 1426 aa23.06■■□□□ 1.28
TRIM65-203ENST00000540812 CCDC7Q96M83 1385 aa23.04■■□□□ 1.28
TRIM65-203ENST00000540812 USP54Q70EL1 1684 aa23.04■■□□□ 1.28
TRIM65-203ENST00000540812 ANO8Q9HCE9 1232 aaPredicted RBP23.04■■□□□ 1.28
TRIM65-203ENST00000540812 RGPD3A6NKT7 1758 aaPredicted RBP23.04■■□□□ 1.28
TRIM65-203ENST00000540812 RGPD4Q7Z3J3 1758 aa23.04■■□□□ 1.28
TRIM65-203ENST00000540812 EXOC5O00471 708 aa23.03■■□□□ 1.28
TRIM65-203ENST00000540812 HDGFL2Q7Z4V5 671 aaPredicted RBP23.03■■□□□ 1.28
TRIM65-203ENST00000540812 PROM2Q8N271 834 aa23.03■■□□□ 1.28
TRIM65-203ENST00000540812 ERBB3P21860 1342 aa23.02■■□□□ 1.28
TRIM65-203ENST00000540812 A0A1W2PP64 1363 aa23.01■■□□□ 1.27
TRIM65-203ENST00000540812 EDC4Q6P2E9 1401 aaKnown RBP23.01■■□□□ 1.27
TRIM65-203ENST00000540812 TNS2Q63HR2 1409 aa23■■□□□ 1.27
TRIM65-203ENST00000540812 NLRP2Q9NX02 1062 aa23■■□□□ 1.27
TRIM65-203ENST00000540812 KCNQ2O43526 872 aa22.99■■□□□ 1.27
TRIM65-203ENST00000540812 SPON1Q9HCB6 807 aa22.99■■□□□ 1.27
TRIM65-203ENST00000540812 TESK2Q96S53 571 aa22.98■■□□□ 1.27
TRIM65-203ENST00000540812 TERF2IPQ9NYB0 399 aa22.98■■□□□ 1.27
TRIM65-203ENST00000540812 LTN1O94822 1766 aa22.98■■□□□ 1.27
TRIM65-203ENST00000540812 ANKRD24Q8TF21 1146 aa22.97■■□□□ 1.27
TRIM65-203ENST00000540812 PUS7Q96PZ0 661 aaKnown RBP22.97■■□□□ 1.27
TRIM65-203ENST00000540812 PDGFDQ9GZP0 370 aaPredicted RBP22.96■■□□□ 1.27
TRIM65-203ENST00000540812 ST20-MTHFSA0A0A6YYL1 179 aa22.95■■□□□ 1.26
TRIM65-203ENST00000540812 TXNRD1Q16881 649 aa22.95■■□□□ 1.26
TRIM65-203ENST00000540812 IL2RBP14784 551 aa22.94■■□□□ 1.26
TRIM65-203ENST00000540812 ACSBG1Q96GR2 724 aa22.94■■□□□ 1.26
TRIM65-203ENST00000540812 PPP1R1BQ9UD71 204 aaPredicted RBP22.94■■□□□ 1.26
TRIM65-203ENST00000540812 CASZ1Q86V15 1759 aa22.93■■□□□ 1.26
TRIM65-203ENST00000540812 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
TRIM65-203ENST00000540812 IP6K1Q92551 441 aa22.9■■□□□ 1.26
TRIM65-203ENST00000540812 NINLQ9Y2I6 1382 aa22.89■■□□□ 1.26
TRIM65-203ENST00000540812 ZBTB7AO95365 584 aa22.89■■□□□ 1.25
TRIM65-203ENST00000540812 LTV1Q96GA3 475 aaPredicted RBP22.89■■□□□ 1.25
TRIM65-203ENST00000540812 FBLN1P23142 703 aa22.88■■□□□ 1.25
TRIM65-203ENST00000540812 SLC15A2Q16348 729 aa22.88■■□□□ 1.25
TRIM65-203ENST00000540812 STK32BQ9NY57 414 aa22.88■■□□□ 1.25
TRIM65-203ENST00000540812 COG3Q96JB2 828 aa22.86■■□□□ 1.25
TRIM65-203ENST00000540812 MAP3K19Q56UN5 1328 aa22.85■■□□□ 1.25
TRIM65-203ENST00000540812 PTGER2P43116 358 aa22.84■■□□□ 1.25
TRIM65-203ENST00000540812 ATF5Q9Y2D1 282 aaPredicted RBP22.84■■□□□ 1.25
TRIM65-203ENST00000540812 ANKRD36BQ8N2N9 1353 aa22.84■■□□□ 1.25
TRIM65-203ENST00000540812 HOXC9P31274 260 aa22.83■■□□□ 1.25
TRIM65-203ENST00000540812 DDX54Q8TDD1 881 aaKnown RBP22.82■■□□□ 1.24
TRIM65-203ENST00000540812 BTAF1O14981 1849 aa22.82■■□□□ 1.24
TRIM65-203ENST00000540812 UTRNP46939 3433 aa22.81■■□□□ 1.24
TRIM65-203ENST00000540812 USP47Q96K76 1375 aa22.81■■□□□ 1.24
TRIM65-203ENST00000540812 SLC24A1O60721 1099 aa22.81■■□□□ 1.24
TRIM65-203ENST00000540812 AMPHP49418 695 aa22.81■■□□□ 1.24
TRIM65-203ENST00000540812 PAPPAQ13219 1627 aa22.81■■□□□ 1.24
TRIM65-203ENST00000540812 KAT6BQ8WYB5 2073 aa22.81■■□□□ 1.24
TRIM65-203ENST00000540812 MYOM1P52179 1685 aa22.81■■□□□ 1.24
TRIM65-203ENST00000540812 TRIM26Q12899 539 aaPredicted RBP22.8■■□□□ 1.24
TRIM65-203ENST00000540812 FAM208AQ9UK61 1670 aaKnown RBP22.8■■□□□ 1.24
TRIM65-203ENST00000540812 YY1P25490 414 aa22.79■■□□□ 1.24
TRIM65-203ENST00000540812 LRRC4BQ9NT99 713 aa22.79■■□□□ 1.24
TRIM65-203ENST00000540812 TMF1P82094 1093 aa22.78■■□□□ 1.24
TRIM65-203ENST00000540812 RRS1Q15050 365 aaKnown RBP22.78■■□□□ 1.24
TRIM65-203ENST00000540812 ZNF827Q17R98 1081 aa22.78■■□□□ 1.24
TRIM65-203ENST00000540812 FYB1O15117 783 aa22.77■■□□□ 1.24
TRIM65-203ENST00000540812 MTFR1LQ9H019 292 aa22.77■■□□□ 1.24
TRIM65-203ENST00000540812 GGNBP2Q9H3C7 697 aa22.77■■□□□ 1.24
TRIM65-203ENST00000540812 SGIP1Q9BQI5 828 aa22.76■■□□□ 1.23
TRIM65-203ENST00000540812 MEGF6O75095 1541 aa22.76■■□□□ 1.23
TRIM65-203ENST00000540812 RGPD2P0DJD1 1756 aa22.76■■□□□ 1.23
TRIM65-203ENST00000540812 RTL1A6NKG5 1358 aa22.75■■□□□ 1.23
TRIM65-203ENST00000540812 DCAF8L1A6NGE4 600 aa22.74■■□□□ 1.23
TRIM65-203ENST00000540812 PRIM1P49642 420 aaKnown RBP22.73■■□□□ 1.23
TRIM65-203ENST00000540812 NBPF6Q5VWK0 638 aa22.73■■□□□ 1.23
TRIM65-203ENST00000540812 ZCRB1Q8TBF4 217 aaKnown RBP22.73■■□□□ 1.23
TRIM65-203ENST00000540812 NBPF4Q96M43 638 aa22.73■■□□□ 1.23
TRIM65-203ENST00000540812 FHDC1Q9C0D6 1143 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms