RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 PANK3Q9H999 370 aa23.09■■□□□ 1.29
UBC-208ENST00000540700 TTC21BQ7Z4L5 1316 aa23.08■■□□□ 1.29
UBC-208ENST00000540700 CRYBG1Q9Y4K1 1723 aa23.08■■□□□ 1.29
UBC-208ENST00000540700 ZNF692Q9BU19 519 aaPredicted RBP23.08■■□□□ 1.29
UBC-208ENST00000540700 TERF2IPQ9NYB0 399 aa23.08■■□□□ 1.29
UBC-208ENST00000540700 PPP1R1BQ9UD71 204 aaPredicted RBP23.08■■□□□ 1.29
UBC-208ENST00000540700 ZNF316A6NFI3 1004 aaPredicted RBP23.07■■□□□ 1.28
UBC-208ENST00000540700 EDC4Q6P2E9 1401 aaKnown RBP23.07■■□□□ 1.28
UBC-208ENST00000540700 PIK3C2AO00443 1686 aa23.06■■□□□ 1.28
UBC-208ENST00000540700 LARP1Q6PKG0 1096 aaKnown RBP23.06■■□□□ 1.28
UBC-208ENST00000540700 BARGINQ6ZT62 677 aa23.06■■□□□ 1.28
UBC-208ENST00000540700 NSD3Q9BZ95 1437 aa23.06■■□□□ 1.28
UBC-208ENST00000540700 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.04■■□□□ 1.28
UBC-208ENST00000540700 TCP11L2Q8N4U5 519 aa23.04■■□□□ 1.28
UBC-208ENST00000540700 BRD4O60885 1362 aaPredicted RBP23.03■■□□□ 1.28
UBC-208ENST00000540700 SPON1Q9HCB6 807 aa23.03■■□□□ 1.28
UBC-208ENST00000540700 NME9Q86XW9 330 aa23.02■■□□□ 1.28
UBC-208ENST00000540700 PHRF1Q9P1Y6 1649 aaKnown RBP23■■□□□ 1.27
UBC-208ENST00000540700 DCAF8L1A6NGE4 600 aa23■■□□□ 1.27
UBC-208ENST00000540700 PER1O15534 1290 aaPredicted RBP23■■□□□ 1.27
UBC-208ENST00000540700 KCNQ2O43526 872 aa23■■□□□ 1.27
UBC-208ENST00000540700 ABTB2Q8N961 1025 aa23■■□□□ 1.27
UBC-208ENST00000540700 TTC21AQ8NDW8 1320 aa22.99■■□□□ 1.27
UBC-208ENST00000540700 RREB1Q92766 1687 aa22.98■■□□□ 1.27
UBC-208ENST00000540700 CAMTA1Q9Y6Y1 1673 aa22.98■■□□□ 1.27
UBC-208ENST00000540700 NUP188Q5SRE5 1749 aa22.98■■□□□ 1.27
UBC-208ENST00000540700 DDX10Q13206 875 aaKnown RBP22.97■■□□□ 1.27
UBC-208ENST00000540700 ZBTB7CA1YPR0 619 aa22.96■■□□□ 1.27
UBC-208ENST00000540700 FYB1O15117 783 aa22.96■■□□□ 1.27
UBC-208ENST00000540700 USP31Q70CQ4 1352 aa22.96■■□□□ 1.27
UBC-208ENST00000540700 OVOS2A0A0J9YW53 1432 aa22.96■■□□□ 1.27
UBC-208ENST00000540700 OVOS2Q6IE36 1432 aa22.96■■□□□ 1.27
UBC-208ENST00000540700 USP54Q70EL1 1684 aa22.96■■□□□ 1.27
UBC-208ENST00000540700 USP19O94966 1318 aa22.95■■□□□ 1.26
UBC-208ENST00000540700 AMER1Q5JTC6 1135 aaPredicted RBP22.94■■□□□ 1.26
UBC-208ENST00000540700 GGNBP2Q9H3C7 697 aa22.94■■□□□ 1.26
UBC-208ENST00000540700 THRAP3Q9Y2W1 955 aaKnown RBP22.94■■□□□ 1.26
UBC-208ENST00000540700 KIF20BQ96Q89 1820 aa22.94■■□□□ 1.26
UBC-208ENST00000540700 SLIT3O75094 1523 aa22.93■■□□□ 1.26
UBC-208ENST00000540700 CPDO75976 1380 aa22.93■■□□□ 1.26
UBC-208ENST00000540700 NLRP6P59044 892 aa22.93■■□□□ 1.26
UBC-208ENST00000540700 GCP02774 474 aa22.91■■□□□ 1.26
UBC-208ENST00000540700 NLRP13Q86W25 1043 aa22.9■■□□□ 1.26
UBC-208ENST00000540700 ANO8Q9HCE9 1232 aaPredicted RBP22.9■■□□□ 1.26
UBC-208ENST00000540700 CGNL1Q0VF96 1302 aa22.89■■□□□ 1.26
UBC-208ENST00000540700 NFAT5O94916 1531 aa22.88■■□□□ 1.25
UBC-208ENST00000540700 PTF1AQ7RTS3 328 aa22.88■■□□□ 1.25
UBC-208ENST00000540700 KNSTRNQ9Y448 316 aa22.88■■□□□ 1.25
UBC-208ENST00000540700 OVOS2A0A0G2JMS6 1433 aa22.88■■□□□ 1.25
UBC-208ENST00000540700 LMO7Q8WWI1 1683 aa22.87■■□□□ 1.25
UBC-208ENST00000540700 COL5A2P05997 1499 aaPredicted RBP22.87■■□□□ 1.25
UBC-208ENST00000540700 FBLN1P23142 703 aa22.87■■□□□ 1.25
UBC-208ENST00000540700 BCL11BQ9C0K0 894 aaPredicted RBP22.87■■□□□ 1.25
UBC-208ENST00000540700 PDGFDQ9GZP0 370 aaPredicted RBP22.87■■□□□ 1.25
UBC-208ENST00000540700 CRB1P82279 1406 aa22.86■■□□□ 1.25
UBC-208ENST00000540700 ZBTB7AO95365 584 aa22.86■■□□□ 1.25
UBC-208ENST00000540700 DDB1Q16531 1140 aa22.86■■□□□ 1.25
UBC-208ENST00000540700 ANKRD26Q9UPS8 1709 aa22.85■■□□□ 1.25
UBC-208ENST00000540700 PLSCR1O15162 318 aa22.84■■□□□ 1.25
UBC-208ENST00000540700 SOX12O15370 315 aa22.84■■□□□ 1.25
UBC-208ENST00000540700 TOM1L2Q6ZVM7 507 aa22.84■■□□□ 1.25
UBC-208ENST00000540700 COG3Q96JB2 828 aa22.84■■□□□ 1.25
UBC-208ENST00000540700 CC2D1BQ5T0F9 858 aaKnown RBP22.83■■□□□ 1.25
UBC-208ENST00000540700 NSD2O96028 1365 aa22.83■■□□□ 1.25
UBC-208ENST00000540700 PARP4Q9UKK3 1724 aaKnown RBP22.82■■□□□ 1.24
UBC-208ENST00000540700 NPC1L1Q9UHC9 1359 aa22.82■■□□□ 1.24
UBC-208ENST00000540700 CNGB1Q14028 1251 aaPredicted RBP22.82■■□□□ 1.24
UBC-208ENST00000540700 ATF5Q9Y2D1 282 aaPredicted RBP22.82■■□□□ 1.24
UBC-208ENST00000540700 UTRNP46939 3433 aa22.8■■□□□ 1.24
UBC-208ENST00000540700 PROM2Q8N271 834 aa22.8■■□□□ 1.24
UBC-208ENST00000540700 MARCH10Q8NA82 808 aaPredicted RBP22.79■■□□□ 1.24
UBC-208ENST00000540700 AATKQ6ZMQ8 1374 aa22.78■■□□□ 1.24
UBC-208ENST00000540700 ZNF784Q8NCA9 323 aaPredicted RBP22.78■■□□□ 1.24
UBC-208ENST00000540700 PEAK1Q9H792 1746 aa22.78■■□□□ 1.24
UBC-208ENST00000540700 ARHGEF25Q86VW2 580 aa22.77■■□□□ 1.24
UBC-208ENST00000540700 KCNH5Q8NCM2 988 aa22.77■■□□□ 1.24
UBC-208ENST00000540700 LRRC37A3O60309 1634 aa22.76■■□□□ 1.23
UBC-208ENST00000540700 PTGER2P43116 358 aa22.76■■□□□ 1.23
UBC-208ENST00000540700 TNNT2P45379 298 aaPredicted RBP22.76■■□□□ 1.23
UBC-208ENST00000540700 RRS1Q15050 365 aaKnown RBP22.76■■□□□ 1.23
UBC-208ENST00000540700 STK32BQ9NY57 414 aa22.76■■□□□ 1.23
UBC-208ENST00000540700 AXIN2Q9Y2T1 843 aa22.76■■□□□ 1.23
UBC-208ENST00000540700 MORC1Q86VD1 984 aa22.75■■□□□ 1.23
UBC-208ENST00000540700 COL18A1P39060 1754 aa22.75■■□□□ 1.23
UBC-208ENST00000540700 CASZ1Q86V15 1759 aa22.74■■□□□ 1.23
UBC-208ENST00000540700 TXNRD1Q16881 649 aa22.74■■□□□ 1.23
UBC-208ENST00000540700 FHDC1Q9C0D6 1143 aaPredicted RBP22.74■■□□□ 1.23
UBC-208ENST00000540700 MAP3K19Q56UN5 1328 aa22.74■■□□□ 1.23
UBC-208ENST00000540700 CSB-PGBD3P0DP91 1061 aa22.73■■□□□ 1.23
UBC-208ENST00000540700 WDR17Q8IZU2 1322 aa22.73■■□□□ 1.23
UBC-208ENST00000540700 LTN1O94822 1766 aa22.73■■□□□ 1.23
UBC-208ENST00000540700 RGPD3A6NKT7 1758 aaPredicted RBP22.72■■□□□ 1.23
UBC-208ENST00000540700 RGPD4Q7Z3J3 1758 aa22.72■■□□□ 1.23
UBC-208ENST00000540700 SYT17Q9BSW7 474 aa22.72■■□□□ 1.23
UBC-208ENST00000540700 EMILIN1Q9Y6C2 1016 aa22.72■■□□□ 1.23
UBC-208ENST00000540700 SLC15A2Q16348 729 aa22.71■■□□□ 1.23
UBC-208ENST00000540700 CDCA7Q9BWT1 371 aaPredicted RBP22.71■■□□□ 1.23
UBC-208ENST00000540700 POLKQ9UBT6 870 aa22.71■■□□□ 1.23
UBC-208ENST00000540700 SBF2Q86WG5 1849 aa22.71■■□□□ 1.23
UBC-208ENST00000540700 SMG6Q86US8 1419 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms