RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 KTN1Q86UP2 1357 aaKnown RBP27.38■■□□□ 1.97
SOD2-212ENST00000540491 PLSCR1O15162 318 aa27.38■■□□□ 1.97
SOD2-212ENST00000540491 CARD10Q9BWT7 1032 aa27.38■■□□□ 1.97
SOD2-212ENST00000540491 AXIN2Q9Y2T1 843 aa27.38■■□□□ 1.97
SOD2-212ENST00000540491 BCL9O00512 1426 aa27.36■■□□□ 1.97
SOD2-212ENST00000540491 CARD11Q9BXL7 1154 aa27.36■■□□□ 1.97
SOD2-212ENST00000540491 PUS7Q96PZ0 661 aaKnown RBP27.35■■□□□ 1.97
SOD2-212ENST00000540491 COL18A1P39060 1754 aa27.35■■□□□ 1.97
SOD2-212ENST00000540491 CSB-PGBD3P0DP91 1061 aa27.34■■□□□ 1.97
SOD2-212ENST00000540491 BCL11BQ9C0K0 894 aaPredicted RBP27.34■■□□□ 1.97
SOD2-212ENST00000540491 ABCC6O95255 1503 aa27.34■■□□□ 1.97
SOD2-212ENST00000540491 USP31Q70CQ4 1352 aa27.33■■□□□ 1.97
SOD2-212ENST00000540491 AKAP12Q02952 1782 aa27.32■■□□□ 1.96
SOD2-212ENST00000540491 SLC24A1O60721 1099 aa27.32■■□□□ 1.96
SOD2-212ENST00000540491 RREB1Q92766 1687 aa27.32■■□□□ 1.96
SOD2-212ENST00000540491 CCDC7Q96M83 1385 aa27.32■■□□□ 1.96
SOD2-212ENST00000540491 HDGFL2Q7Z4V5 671 aaPredicted RBP27.3■■□□□ 1.96
SOD2-212ENST00000540491 EXOC5O00471 708 aa27.29■■□□□ 1.96
SOD2-212ENST00000540491 PEAK1Q9H792 1746 aa27.28■■□□□ 1.96
SOD2-212ENST00000540491 TONSLQ96HA7 1378 aa27.28■■□□□ 1.96
SOD2-212ENST00000540491 SOX12O15370 315 aa27.28■■□□□ 1.96
SOD2-212ENST00000540491 LRRC37A3O60309 1634 aa27.27■■□□□ 1.96
SOD2-212ENST00000540491 NFAT5O94916 1531 aa27.27■■□□□ 1.96
SOD2-212ENST00000540491 MARCH10Q8NA82 808 aaPredicted RBP27.27■■□□□ 1.96
SOD2-212ENST00000540491 TERF2IPQ9NYB0 399 aa27.27■■□□□ 1.96
SOD2-212ENST00000540491 SPON1Q9HCB6 807 aa27.26■■□□□ 1.95
SOD2-212ENST00000540491 NUP188Q5SRE5 1749 aa27.26■■□□□ 1.95
SOD2-212ENST00000540491 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.25■■□□□ 1.95
SOD2-212ENST00000540491 TMC1Q8TDI8 760 aa27.25■■□□□ 1.95
SOD2-212ENST00000540491 RGPD3A6NKT7 1758 aaPredicted RBP27.25■■□□□ 1.95
SOD2-212ENST00000540491 RGPD4Q7Z3J3 1758 aa27.25■■□□□ 1.95
SOD2-212ENST00000540491 EDC4Q6P2E9 1401 aaKnown RBP27.23■■□□□ 1.95
SOD2-212ENST00000540491 MON2Q7Z3U7 1717 aa27.22■■□□□ 1.95
SOD2-212ENST00000540491 KCNQ2O43526 872 aa27.22■■□□□ 1.95
SOD2-212ENST00000540491 NINLQ9Y2I6 1382 aa27.22■■□□□ 1.95
SOD2-212ENST00000540491 ERBB3P21860 1342 aa27.21■■□□□ 1.95
SOD2-212ENST00000540491 CD163L1Q9NR16 1453 aa27.2■■□□□ 1.95
SOD2-212ENST00000540491 NME9Q86XW9 330 aa27.2■■□□□ 1.94
SOD2-212ENST00000540491 SLC12A5Q9H2X9 1139 aa27.2■■□□□ 1.94
SOD2-212ENST00000540491 SBF2Q86WG5 1849 aa27.18■■□□□ 1.94
SOD2-212ENST00000540491 USP54Q70EL1 1684 aa27.18■■□□□ 1.94
SOD2-212ENST00000540491 WNK3Q9BYP7 1800 aa27.18■■□□□ 1.94
SOD2-212ENST00000540491 TNS2Q63HR2 1409 aa27.17■■□□□ 1.94
SOD2-212ENST00000540491 NLRP2Q9NX02 1062 aa27.17■■□□□ 1.94
SOD2-212ENST00000540491 PPP1R1BQ9UD71 204 aaPredicted RBP27.17■■□□□ 1.94
SOD2-212ENST00000540491 IL2RBP14784 551 aa27.15■■□□□ 1.94
SOD2-212ENST00000540491 PROM2Q8N271 834 aa27.14■■□□□ 1.94
SOD2-212ENST00000540491 RGPD5Q99666 1765 aa27.14■■□□□ 1.93
SOD2-212ENST00000540491 A0A1W2PP64 1363 aa27.13■■□□□ 1.93
SOD2-212ENST00000540491 DCAF8L1A6NGE4 600 aa27.13■■□□□ 1.93
SOD2-212ENST00000540491 TXNRD1Q16881 649 aa27.13■■□□□ 1.93
SOD2-212ENST00000540491 PTF1AQ7RTS3 328 aa27.13■■□□□ 1.93
SOD2-212ENST00000540491 ANKRD24Q8TF21 1146 aa27.12■■□□□ 1.93
SOD2-212ENST00000540491 TESK2Q96S53 571 aa27.11■■□□□ 1.93
SOD2-212ENST00000540491 ANO8Q9HCE9 1232 aaPredicted RBP27.11■■□□□ 1.93
SOD2-212ENST00000540491 IP6K1Q92551 441 aa27.1■■□□□ 1.93
SOD2-212ENST00000540491 STK32BQ9NY57 414 aa27.1■■□□□ 1.93
SOD2-212ENST00000540491 ST20-MTHFSA0A0A6YYL1 179 aa27.08■■□□□ 1.93
SOD2-212ENST00000540491 SLC15A2Q16348 729 aa27.07■■□□□ 1.92
SOD2-212ENST00000540491 COG3Q96JB2 828 aa27.07■■□□□ 1.92
SOD2-212ENST00000540491 LTN1O94822 1766 aa27.02■■□□□ 1.92
SOD2-212ENST00000540491 ANKRD36BQ8N2N9 1353 aa27■■□□□ 1.91
SOD2-212ENST00000540491 TMF1P82094 1093 aa27■■□□□ 1.91
SOD2-212ENST00000540491 ACSBG1Q96GR2 724 aa27■■□□□ 1.91
SOD2-212ENST00000540491 NHSQ6T4R5 1651 aa26.99■■□□□ 1.91
SOD2-212ENST00000540491 CDCA8Q53HL2 280 aa26.99■■□□□ 1.91
SOD2-212ENST00000540491 MTFR1LQ9H019 292 aa26.99■■□□□ 1.91
SOD2-212ENST00000540491 CASZ1Q86V15 1759 aa26.99■■□□□ 1.91
SOD2-212ENST00000540491 AMPHP49418 695 aa26.98■■□□□ 1.91
SOD2-212ENST00000540491 TRIM26Q12899 539 aaPredicted RBP26.98■■□□□ 1.91
SOD2-212ENST00000540491 MAP3K19Q56UN5 1328 aa26.97■■□□□ 1.91
SOD2-212ENST00000540491 ZBTB7AO95365 584 aa26.97■■□□□ 1.91
SOD2-212ENST00000540491 YY1P25490 414 aa26.96■■□□□ 1.91
SOD2-212ENST00000540491 HOXC9P31274 260 aa26.96■■□□□ 1.91
SOD2-212ENST00000540491 PTGER2P43116 358 aa26.96■■□□□ 1.91
SOD2-212ENST00000540491 FAM208AQ9UK61 1670 aaKnown RBP26.95■■□□□ 1.91
SOD2-212ENST00000540491 SLC27A3Q5K4L6 730 aa26.95■■□□□ 1.9
SOD2-212ENST00000540491 PDGFDQ9GZP0 370 aaPredicted RBP26.95■■□□□ 1.9
SOD2-212ENST00000540491 RTL1A6NKG5 1358 aa26.95■■□□□ 1.9
SOD2-212ENST00000540491 LTV1Q96GA3 475 aaPredicted RBP26.94■■□□□ 1.9
SOD2-212ENST00000540491 DDX54Q8TDD1 881 aaKnown RBP26.93■■□□□ 1.9
SOD2-212ENST00000540491 CGNL1Q0VF96 1302 aa26.92■■□□□ 1.9
SOD2-212ENST00000540491 ATF5Q9Y2D1 282 aaPredicted RBP26.92■■□□□ 1.9
SOD2-212ENST00000540491 TIMELESSQ9UNS1 1208 aa26.91■■□□□ 1.9
SOD2-212ENST00000540491 USP47Q96K76 1375 aa26.9■■□□□ 1.9
SOD2-212ENST00000540491 FYB1O15117 783 aa26.9■■□□□ 1.9
SOD2-212ENST00000540491 HMGB2P26583 209 aaKnown RBP26.89■■□□□ 1.9
SOD2-212ENST00000540491 ZCRB1Q8TBF4 217 aaKnown RBP26.89■■□□□ 1.9
SOD2-212ENST00000540491 SLC16A10Q8TF71 515 aa26.88■■□□□ 1.89
SOD2-212ENST00000540491 SGIP1Q9BQI5 828 aa26.88■■□□□ 1.89
SOD2-212ENST00000540491 KIF24Q5T7B8 1368 aa26.87■■□□□ 1.89
SOD2-212ENST00000540491 KAT6BQ8WYB5 2073 aa26.86■■□□□ 1.89
SOD2-212ENST00000540491 SMG6Q86US8 1419 aaKnown RBP26.86■■□□□ 1.89
SOD2-212ENST00000540491 SYT17Q9BSW7 474 aa26.86■■□□□ 1.89
SOD2-212ENST00000540491 LRRC4BQ9NT99 713 aa26.86■■□□□ 1.89
SOD2-212ENST00000540491 BTAF1O14981 1849 aa26.86■■□□□ 1.89
SOD2-212ENST00000540491 PAPPAQ13219 1627 aa26.84■■□□□ 1.89
SOD2-212ENST00000540491 GGNBP2Q9H3C7 697 aa26.84■■□□□ 1.89
SOD2-212ENST00000540491 PRIM1P49642 420 aaKnown RBP26.83■■□□□ 1.89
SOD2-212ENST00000540491 RAPGEF4Q8WZA2 1011 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms