RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
PABPC1P4-201ENST00000539977 ZNF521Q96K83 1311 aa13.63□□□□□ -0.23
PABPC1P4-201ENST00000539977 ARHGEF25Q86VW2 580 aa13.63□□□□□ -0.23
PABPC1P4-201ENST00000539977 WWC1Q8IX03 1113 aa13.63□□□□□ -0.23
PABPC1P4-201ENST00000539977 MARF1Q9Y4F3 1742 aaKnown RBP13.63□□□□□ -0.23
PABPC1P4-201ENST00000539977 TNS3Q68CZ2 1445 aa13.62□□□□□ -0.23
PABPC1P4-201ENST00000539977 TRPM3Q9HCF6 1732 aaPredicted RBP13.62□□□□□ -0.23
PABPC1P4-201ENST00000539977 IP6K1Q92551 441 aa13.62□□□□□ -0.23
PABPC1P4-201ENST00000539977 EYA1Q99502 592 aa13.62□□□□□ -0.23
PABPC1P4-201ENST00000539977 SOS2Q07890 1332 aaPredicted RBP13.62□□□□□ -0.23
PABPC1P4-201ENST00000539977 NFAT5O94916 1531 aa13.62□□□□□ -0.23
PABPC1P4-201ENST00000539977 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
PABPC1P4-201ENST00000539977 GOLGA2Q08379 1002 aa13.61□□□□□ -0.23
PABPC1P4-201ENST00000539977 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
PABPC1P4-201ENST00000539977 AXIN2Q9Y2T1 843 aa13.61□□□□□ -0.23
PABPC1P4-201ENST00000539977 PIP4K2BP78356 416 aa13.61□□□□□ -0.23
PABPC1P4-201ENST00000539977 PDE3BQ13370 1112 aa13.61□□□□□ -0.23
PABPC1P4-201ENST00000539977 IQSEC2Q5JU85 1478 aa13.6□□□□□ -0.23
PABPC1P4-201ENST00000539977 RIPK4P57078 832 aa13.6□□□□□ -0.23
PABPC1P4-201ENST00000539977 CHRNA2Q15822 529 aa13.6□□□□□ -0.23
PABPC1P4-201ENST00000539977 PNNQ9H307 717 aaKnown RBP13.6□□□□□ -0.23
PABPC1P4-201ENST00000539977 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
PABPC1P4-201ENST00000539977 MED1Q15648 1581 aaPredicted RBP13.59□□□□□ -0.23
PABPC1P4-201ENST00000539977 NEFMP07197 916 aa13.59□□□□□ -0.23
PABPC1P4-201ENST00000539977 TRIM35Q9UPQ4 493 aa13.59□□□□□ -0.23
PABPC1P4-201ENST00000539977 ARHGEF10O15013 1369 aa13.58□□□□□ -0.24
PABPC1P4-201ENST00000539977 IRX6P78412 446 aaPredicted RBP13.58□□□□□ -0.24
PABPC1P4-201ENST00000539977 SLFN5Q08AF3 891 aa13.58□□□□□ -0.24
PABPC1P4-201ENST00000539977 SLIT3O75094 1523 aa13.58□□□□□ -0.24
PABPC1P4-201ENST00000539977 NBPF6Q5VWK0 638 aa13.57□□□□□ -0.24
PABPC1P4-201ENST00000539977 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
PABPC1P4-201ENST00000539977 NBPF4Q96M43 638 aa13.57□□□□□ -0.24
PABPC1P4-201ENST00000539977 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
PABPC1P4-201ENST00000539977 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
PABPC1P4-201ENST00000539977 KIF24Q5T7B8 1368 aa13.57□□□□□ -0.24
PABPC1P4-201ENST00000539977 USP54Q70EL1 1684 aa13.57□□□□□ -0.24
PABPC1P4-201ENST00000539977 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
PABPC1P4-201ENST00000539977 THUMPD2Q9BTF0 503 aaKnown RBP13.57□□□□□ -0.24
PABPC1P4-201ENST00000539977 IGSF1Q8N6C5 1336 aa13.56□□□□□ -0.24
PABPC1P4-201ENST00000539977 RTL1A6NKG5 1358 aa13.56□□□□□ -0.24
PABPC1P4-201ENST00000539977 NFE2L2Q16236 605 aa13.56□□□□□ -0.24
PABPC1P4-201ENST00000539977 NGEFQ8N5V2 710 aa13.56□□□□□ -0.24
PABPC1P4-201ENST00000539977 ANKRD24Q8TF21 1146 aa13.56□□□□□ -0.24
PABPC1P4-201ENST00000539977 KIAA0232Q92628 1395 aa13.56□□□□□ -0.24
PABPC1P4-201ENST00000539977 UBAP1LF5GYI3 381 aa13.55□□□□□ -0.24
PABPC1P4-201ENST00000539977 CCDC27Q2M243 656 aa13.55□□□□□ -0.24
PABPC1P4-201ENST00000539977 FAM83GA6ND36 823 aa13.55□□□□□ -0.24
PABPC1P4-201ENST00000539977 TOM1O60784 492 aa13.55□□□□□ -0.24
PABPC1P4-201ENST00000539977 FKBP8Q14318 412 aa13.55□□□□□ -0.24
PABPC1P4-201ENST00000539977 E9PSI1 815 aa13.54□□□□□ -0.24
PABPC1P4-201ENST00000539977 DCTN1Q14203 1278 aa13.54□□□□□ -0.24
PABPC1P4-201ENST00000539977 WDR63Q8IWG1 891 aa13.53□□□□□ -0.24
PABPC1P4-201ENST00000539977 TRMT2AQ8IZ69 625 aaKnown RBP13.53□□□□□ -0.24
PABPC1P4-201ENST00000539977 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
PABPC1P4-201ENST00000539977 TSR2Q969E8 191 aaKnown RBP13.53□□□□□ -0.24
PABPC1P4-201ENST00000539977 PRDM11Q9NQV5 511 aa13.53□□□□□ -0.24
PABPC1P4-201ENST00000539977 RCAN3Q9UKA8 241 aa13.53□□□□□ -0.24
PABPC1P4-201ENST00000539977 ROBO1Q9Y6N7 1651 aa13.52□□□□□ -0.25
PABPC1P4-201ENST00000539977 KDRP35968 1356 aa13.52□□□□□ -0.25
PABPC1P4-201ENST00000539977 LAS1LQ9Y4W2 734 aaKnown RBP13.52□□□□□ -0.25
PABPC1P4-201ENST00000539977 LTN1O94822 1766 aa13.52□□□□□ -0.25
PABPC1P4-201ENST00000539977 NEFLP07196 543 aa13.51□□□□□ -0.25
PABPC1P4-201ENST00000539977 CSB-PGBD3P0DP91 1061 aa13.51□□□□□ -0.25
PABPC1P4-201ENST00000539977 NLRP2Q9NX02 1062 aa13.51□□□□□ -0.25
PABPC1P4-201ENST00000539977 ERBB3P21860 1342 aa13.51□□□□□ -0.25
PABPC1P4-201ENST00000539977 MCM10Q7L590 875 aa13.5□□□□□ -0.25
PABPC1P4-201ENST00000539977 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
PABPC1P4-201ENST00000539977 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
PABPC1P4-201ENST00000539977 NHSL1Q5SYE7 1610 aa13.49□□□□□ -0.25
PABPC1P4-201ENST00000539977 CPDO75976 1380 aa13.48□□□□□ -0.25
PABPC1P4-201ENST00000539977 PLIN1O60240 522 aa13.48□□□□□ -0.25
PABPC1P4-201ENST00000539977 CERKQ8TCT0 537 aa13.48□□□□□ -0.25
PABPC1P4-201ENST00000539977 PHRF1Q9P1Y6 1649 aaKnown RBP13.48□□□□□ -0.25
PABPC1P4-201ENST00000539977 FANCIQ9NVI1 1328 aa13.47□□□□□ -0.25
PABPC1P4-201ENST00000539977 MYH16Q9H6N6 1097 aa13.47□□□□□ -0.25
PABPC1P4-201ENST00000539977 STRN4Q9NRL3 753 aa13.46□□□□□ -0.25
PABPC1P4-201ENST00000539977 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.26
PABPC1P4-201ENST00000539977 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.26
PABPC1P4-201ENST00000539977 LMOD3Q0VAK6 560 aa13.46□□□□□ -0.26
PABPC1P4-201ENST00000539977 NUTM2AQ8IVF1 878 aaPredicted RBP13.46□□□□□ -0.26
PABPC1P4-201ENST00000539977 ADAMTS2O95450 1211 aa13.45□□□□□ -0.26
PABPC1P4-201ENST00000539977 EXOSC9Q06265 439 aaKnown RBP13.45□□□□□ -0.26
PABPC1P4-201ENST00000539977 GAS2L2Q8NHY3 880 aa13.45□□□□□ -0.26
PABPC1P4-201ENST00000539977 RTF1Q92541 710 aaKnown RBP13.45□□□□□ -0.26
PABPC1P4-201ENST00000539977 IL16Q14005 1332 aa13.45□□□□□ -0.26
PABPC1P4-201ENST00000539977 AHDC1Q5TGY3 1603 aaPredicted RBP13.45□□□□□ -0.26
PABPC1P4-201ENST00000539977 BCAR3O75815 825 aa13.44□□□□□ -0.26
PABPC1P4-201ENST00000539977 RRP1P56182 461 aaKnown RBP13.44□□□□□ -0.26
PABPC1P4-201ENST00000539977 MIS18AQ9NYP9 233 aa13.44□□□□□ -0.26
PABPC1P4-201ENST00000539977 RNF123Q5XPI4 1314 aa13.44□□□□□ -0.26
PABPC1P4-201ENST00000539977 CRYBG1Q9Y4K1 1723 aa13.44□□□□□ -0.26
PABPC1P4-201ENST00000539977 TOM1L2Q6ZVM7 507 aa13.44□□□□□ -0.26
PABPC1P4-201ENST00000539977 CAMTA1Q9Y6Y1 1673 aa13.43□□□□□ -0.26
PABPC1P4-201ENST00000539977 GNAT3A8MTJ3 354 aa13.43□□□□□ -0.26
PABPC1P4-201ENST00000539977 EVA1CP58658 441 aa13.43□□□□□ -0.26
PABPC1P4-201ENST00000539977 LARP1Q6PKG0 1096 aaKnown RBP13.43□□□□□ -0.26
PABPC1P4-201ENST00000539977 BCL2L13Q9BXK5 485 aa13.43□□□□□ -0.26
PABPC1P4-201ENST00000539977 MBIPQ9NS73 344 aa13.43□□□□□ -0.26
PABPC1P4-201ENST00000539977 BTG4Q9NY30 223 aa13.43□□□□□ -0.26
PABPC1P4-201ENST00000539977 USP35Q9P2H5 1018 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms