RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 TULP4Q9NRJ4 1543 aa8.66□□□□□ -1.02
CPSF7-219ENST00000539952 ZBTB7AO95365 584 aa8.66□□□□□ -1.02
CPSF7-219ENST00000539952 SLC15A2Q16348 729 aa8.66□□□□□ -1.02
CPSF7-219ENST00000539952 RTN4Q9NQC3 1192 aaKnown RBP8.66□□□□□ -1.02
CPSF7-219ENST00000539952 TRPM3Q9HCF6 1732 aaPredicted RBP8.66□□□□□ -1.02
CPSF7-219ENST00000539952 ALS2Q96Q42 1657 aa8.65□□□□□ -1.02
CPSF7-219ENST00000539952 ATP7BP35670 1465 aa8.65□□□□□ -1.02
CPSF7-219ENST00000539952 POLR3AO14802 1390 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-219ENST00000539952 BRD4O60885 1362 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-219ENST00000539952 EXOC5O00471 708 aa8.65□□□□□ -1.02
CPSF7-219ENST00000539952 PTGER2P43116 358 aa8.65□□□□□ -1.02
CPSF7-219ENST00000539952 NLRP6P59044 892 aa8.65□□□□□ -1.02
CPSF7-219ENST00000539952 TXNRD1Q16881 649 aa8.65□□□□□ -1.02
CPSF7-219ENST00000539952 TOM1L2Q6ZVM7 507 aa8.65□□□□□ -1.02
CPSF7-219ENST00000539952 FHDC1Q9C0D6 1143 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-219ENST00000539952 MTFR1LQ9H019 292 aa8.65□□□□□ -1.02
CPSF7-219ENST00000539952 ABCA3Q99758 1704 aa8.65□□□□□ -1.03
CPSF7-219ENST00000539952 TNS1Q9HBL0 1735 aaKnown RBP8.65□□□□□ -1.03
CPSF7-219ENST00000539952 OVOS2A0A0G2JMS6 1433 aa8.64□□□□□ -1.03
CPSF7-219ENST00000539952 OVOS2A0A0J9YW53 1432 aa8.64□□□□□ -1.03
CPSF7-219ENST00000539952 OVOS2Q6IE36 1432 aa8.64□□□□□ -1.03
CPSF7-219ENST00000539952 USP19O94966 1318 aa8.64□□□□□ -1.03
CPSF7-219ENST00000539952 ANO8Q9HCE9 1232 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-219ENST00000539952 CAMTA1Q9Y6Y1 1673 aa8.64□□□□□ -1.03
CPSF7-219ENST00000539952 CRB1P82279 1406 aa8.63□□□□□ -1.03
CPSF7-219ENST00000539952 MARCH10Q8NA82 808 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-219ENST00000539952 PDGFDQ9GZP0 370 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-219ENST00000539952 BCL9O00512 1426 aa8.63□□□□□ -1.03
CPSF7-219ENST00000539952 AATKQ6ZMQ8 1374 aa8.62□□□□□ -1.03
CPSF7-219ENST00000539952 ZBTB7CA1YPR0 619 aa8.62□□□□□ -1.03
CPSF7-219ENST00000539952 ARXQ96QS3 562 aa8.62□□□□□ -1.03
CPSF7-219ENST00000539952 ADGRB1O14514 1584 aa8.61□□□□□ -1.03
CPSF7-219ENST00000539952 SRPK2P78362 688 aaKnown RBP8.61□□□□□ -1.03
CPSF7-219ENST00000539952 GPR162Q16538 588 aa8.61□□□□□ -1.03
CPSF7-219ENST00000539952 PTF1AQ7RTS3 328 aa8.61□□□□□ -1.03
CPSF7-219ENST00000539952 KCNH5Q8NCM2 988 aa8.61□□□□□ -1.03
CPSF7-219ENST00000539952 SLC16A10Q8TF71 515 aa8.61□□□□□ -1.03
CPSF7-219ENST00000539952 SGIP1Q9BQI5 828 aa8.61□□□□□ -1.03
CPSF7-219ENST00000539952 ZNF692Q9BU19 519 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-219ENST00000539952 CARD10Q9BWT7 1032 aa8.61□□□□□ -1.03
CPSF7-219ENST00000539952 WDR17Q8IZU2 1322 aa8.6□□□□□ -1.03
CPSF7-219ENST00000539952 RREB1Q92766 1687 aa8.6□□□□□ -1.03
CPSF7-219ENST00000539952 CSB-PGBD3P0DP91 1061 aa8.6□□□□□ -1.03
CPSF7-219ENST00000539952 CABP1Q9NZU7 370 aa8.6□□□□□ -1.03
CPSF7-219ENST00000539952 AXIN2Q9Y2T1 843 aa8.6□□□□□ -1.03
CPSF7-219ENST00000539952 NUP188Q5SRE5 1749 aa8.6□□□□□ -1.03
CPSF7-219ENST00000539952 GIGYF1O75420 1035 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-219ENST00000539952 ARHGEF25Q86VW2 580 aa8.59□□□□□ -1.03
CPSF7-219ENST00000539952 COL5A2P05997 1499 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-219ENST00000539952 POLD1P28340 1107 aa8.58□□□□□ -1.04
CPSF7-219ENST00000539952 CABP2Q9NPB3 220 aa8.58□□□□□ -1.04
CPSF7-219ENST00000539952 MAP3K5Q99683 1374 aa8.58□□□□□ -1.04
CPSF7-219ENST00000539952 CRYBG1Q9Y4K1 1723 aa8.57□□□□□ -1.04
CPSF7-219ENST00000539952 GRIN3BO60391 1043 aa8.57□□□□□ -1.04
CPSF7-219ENST00000539952 CENPJQ9HC77 1338 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-219ENST00000539952 SSUH2Q9Y2M2 353 aa8.56□□□□□ -1.04
CPSF7-219ENST00000539952 CCDC7Q96M83 1385 aa8.56□□□□□ -1.04
CPSF7-219ENST00000539952 PPIP5K1Q6PFW1 1433 aa8.55□□□□□ -1.04
CPSF7-219ENST00000539952 PARP4Q9UKK3 1724 aaKnown RBP8.55□□□□□ -1.04
CPSF7-219ENST00000539952 HMGB2P26583 209 aaKnown RBP8.55□□□□□ -1.04
CPSF7-219ENST00000539952 NBPF1Q3BBV0 1214 aa8.55□□□□□ -1.04
CPSF7-219ENST00000539952 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
CPSF7-219ENST00000539952 PHRF1Q9P1Y6 1649 aaKnown RBP8.54□□□□□ -1.04
CPSF7-219ENST00000539952 ITSN1Q15811 1721 aa8.54□□□□□ -1.04
CPSF7-219ENST00000539952 LMO7Q8WWI1 1683 aa8.54□□□□□ -1.04
CPSF7-219ENST00000539952 NRKQ7Z2Y5 1582 aa8.54□□□□□ -1.04
CPSF7-219ENST00000539952 SLC27A3Q5K4L6 730 aa8.54□□□□□ -1.04
CPSF7-219ENST00000539952 ACSBG1Q96GR2 724 aa8.54□□□□□ -1.04
CPSF7-219ENST00000539952 CHD4Q14839 1912 aa8.54□□□□□ -1.04
CPSF7-219ENST00000539952 TTC21BQ7Z4L5 1316 aa8.54□□□□□ -1.04
CPSF7-219ENST00000539952 TTC21AQ8NDW8 1320 aa8.54□□□□□ -1.04
CPSF7-219ENST00000539952 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-219ENST00000539952 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
CPSF7-219ENST00000539952 RAB3GAP2Q9H2M9 1393 aa8.53□□□□□ -1.04
CPSF7-219ENST00000539952 SPDYE2BA6NHP3 402 aa8.53□□□□□ -1.04
CPSF7-219ENST00000539952 SPDYE6P0CI01 402 aa8.53□□□□□ -1.04
CPSF7-219ENST00000539952 IL2RBP14784 551 aa8.53□□□□□ -1.04
CPSF7-219ENST00000539952 SPDYE2Q495Y8 402 aa8.53□□□□□ -1.04
CPSF7-219ENST00000539952 KLHL34Q8N239 644 aa8.53□□□□□ -1.04
CPSF7-219ENST00000539952 USP6P35125 1406 aa8.53□□□□□ -1.04
CPSF7-219ENST00000539952 CASZ1Q86V15 1759 aa8.53□□□□□ -1.04
CPSF7-219ENST00000539952 EVC2Q86UK5 1308 aa8.53□□□□□ -1.04
CPSF7-219ENST00000539952 PEAK1Q9H792 1746 aa8.52□□□□□ -1.05
CPSF7-219ENST00000539952 AKT1S1Q96B36 256 aa8.52□□□□□ -1.05
CPSF7-219ENST00000539952 LRRC4BQ9NT99 713 aa8.52□□□□□ -1.05
CPSF7-219ENST00000539952 NLRP2Q9NX02 1062 aa8.52□□□□□ -1.05
CPSF7-219ENST00000539952 TFCP2L1Q9NZI6 479 aa8.52□□□□□ -1.05
CPSF7-219ENST00000539952 SBF2Q86WG5 1849 aa8.52□□□□□ -1.05
CPSF7-219ENST00000539952 SOX12O15370 315 aa8.51□□□□□ -1.05
CPSF7-219ENST00000539952 ZNF827Q17R98 1081 aa8.51□□□□□ -1.05
CPSF7-219ENST00000539952 CEP350Q5VT06 3117 aa8.5□□□□□ -1.05
CPSF7-219ENST00000539952 VASPP50552 380 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-219ENST00000539952 CPSF1Q10570 1443 aaKnown RBP8.5□□□□□ -1.05
CPSF7-219ENST00000539952 GPBP1L1Q9HC44 474 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-219ENST00000539952 MYOM1P52179 1685 aa8.49□□□□□ -1.05
CPSF7-219ENST00000539952 PNPLA7Q6ZV29 1317 aa8.49□□□□□ -1.05
CPSF7-219ENST00000539952 SLIT3O75094 1523 aa8.49□□□□□ -1.05
CPSF7-219ENST00000539952 HSPA6P17066 643 aa8.48□□□□□ -1.05
CPSF7-219ENST00000539952 IFNLR1Q8IU57 520 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-219ENST00000539952 FLAD1Q8NFF5 587 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms