RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 COG3Q96JB2 828 aa17.75■□□□□ 0.43
UBE3B-210ENST00000539599 IPO8O15397 1037 aaKnown RBP17.75■□□□□ 0.43
UBE3B-210ENST00000539599 SIRT2Q8IXJ6 389 aa17.75■□□□□ 0.43
UBE3B-210ENST00000539599 ZBTB7BO15156 539 aaPredicted RBP17.74■□□□□ 0.43
UBE3B-210ENST00000539599 SETD1AO15047 1707 aaKnown RBP17.74■□□□□ 0.43
UBE3B-210ENST00000539599 TWISTNBQ3B726 338 aaPredicted RBP17.74■□□□□ 0.43
UBE3B-210ENST00000539599 NRXN3Q9Y4C0 1643 aa17.74■□□□□ 0.43
UBE3B-210ENST00000539599 NUCB1Q02818 461 aa17.74■□□□□ 0.43
UBE3B-210ENST00000539599 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
UBE3B-210ENST00000539599 MCM10Q7L590 875 aa17.73■□□□□ 0.43
UBE3B-210ENST00000539599 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
UBE3B-210ENST00000539599 PNNQ9H307 717 aaKnown RBP17.73■□□□□ 0.43
UBE3B-210ENST00000539599 ALDH1L2Q3SY69 923 aa17.73■□□□□ 0.43
UBE3B-210ENST00000539599 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
UBE3B-210ENST00000539599 MIS18AQ9NYP9 233 aa17.73■□□□□ 0.43
UBE3B-210ENST00000539599 ATP7BP35670 1465 aa17.73■□□□□ 0.43
UBE3B-210ENST00000539599 CEBPAP49715 358 aaPredicted RBP17.72■□□□□ 0.43
UBE3B-210ENST00000539599 SULT6B1Q6IMI4 303 aa17.72■□□□□ 0.43
UBE3B-210ENST00000539599 GZF1Q9H116 711 aaPredicted RBP17.72■□□□□ 0.43
UBE3B-210ENST00000539599 FOXD4L1Q9NU39 408 aa17.72■□□□□ 0.43
UBE3B-210ENST00000539599 CCDC61Q9Y6R9 512 aa17.72■□□□□ 0.43
UBE3B-210ENST00000539599 ZMYM3Q14202 1370 aa17.71■□□□□ 0.43
UBE3B-210ENST00000539599 SLC26A8Q96RN1 970 aa17.71■□□□□ 0.43
UBE3B-210ENST00000539599 EDC4Q6P2E9 1401 aaKnown RBP17.71■□□□□ 0.43
UBE3B-210ENST00000539599 ROBO2Q9HCK4 1378 aa17.71■□□□□ 0.43
UBE3B-210ENST00000539599 APBB1O00213 710 aa17.7■□□□□ 0.42
UBE3B-210ENST00000539599 HSP90AB2PQ58FF8 381 aa17.7■□□□□ 0.42
UBE3B-210ENST00000539599 SPATA31D1Q6ZQQ2 1576 aa17.7■□□□□ 0.42
UBE3B-210ENST00000539599 ZNF853P0CG23 659 aa17.69■□□□□ 0.42
UBE3B-210ENST00000539599 GNAI1P63096 354 aa17.69■□□□□ 0.42
UBE3B-210ENST00000539599 EIF4A2Q14240 407 aaKnown RBP17.69■□□□□ 0.42
UBE3B-210ENST00000539599 DLG5Q8TDM6 1919 aa17.69■□□□□ 0.42
UBE3B-210ENST00000539599 CDC42BPGQ6DT37 1551 aa17.69■□□□□ 0.42
UBE3B-210ENST00000539599 IFT57Q9NWB7 429 aa17.69■□□□□ 0.42
UBE3B-210ENST00000539599 RBM42Q9BTD8 480 aaKnown RBP17.68■□□□□ 0.42
UBE3B-210ENST00000539599 FOXO3O43524 673 aa17.68■□□□□ 0.42
UBE3B-210ENST00000539599 C16orf71Q8IYS4 520 aaPredicted RBP17.68■□□□□ 0.42
UBE3B-210ENST00000539599 DLC1Q96QB1 1528 aa17.67■□□□□ 0.42
UBE3B-210ENST00000539599 CD2BP2O95400 341 aaKnown RBP17.67■□□□□ 0.42
UBE3B-210ENST00000539599 LTKP29376 864 aa17.67■□□□□ 0.42
UBE3B-210ENST00000539599 CFAP44Q96MT7 982 aa17.67■□□□□ 0.42
UBE3B-210ENST00000539599 ACEP12821 1306 aa17.66■□□□□ 0.42
UBE3B-210ENST00000539599 OTUD7AQ8TE49 926 aaPredicted RBP17.65■□□□□ 0.42
UBE3B-210ENST00000539599 CDK12Q9NYV4 1490 aaPredicted RBP17.65■□□□□ 0.42
UBE3B-210ENST00000539599 ABCC4O15439 1325 aa17.64■□□□□ 0.41
UBE3B-210ENST00000539599 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
UBE3B-210ENST00000539599 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.63■□□□□ 0.41
UBE3B-210ENST00000539599 PTCH1Q13635 1447 aa17.63■□□□□ 0.41
UBE3B-210ENST00000539599 TTC21BQ7Z4L5 1316 aa17.63■□□□□ 0.41
UBE3B-210ENST00000539599 SMARCA5O60264 1052 aaPredicted RBP17.63■□□□□ 0.41
UBE3B-210ENST00000539599 NUTM2GQ5VZR2 741 aa17.63■□□□□ 0.41
UBE3B-210ENST00000539599 TBC1D9Q6ZT07 1266 aa17.63■□□□□ 0.41
UBE3B-210ENST00000539599 AGLP35573 1532 aa17.62■□□□□ 0.41
UBE3B-210ENST00000539599 GSPT1P15170 499 aaKnown RBP17.61■□□□□ 0.41
UBE3B-210ENST00000539599 HSCBQ8IWL3 235 aa17.61■□□□□ 0.41
UBE3B-210ENST00000539599 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.61■□□□□ 0.41
UBE3B-210ENST00000539599 KIF2CQ99661 725 aa17.61■□□□□ 0.41
UBE3B-210ENST00000539599 KNDC1Q76NI1 1749 aa17.6■□□□□ 0.41
UBE3B-210ENST00000539599 AATKQ6ZMQ8 1374 aa17.6■□□□□ 0.41
UBE3B-210ENST00000539599 TNRQ92752 1358 aa17.6■□□□□ 0.41
UBE3B-210ENST00000539599 BRPF1P55201 1214 aaPredicted RBP17.6■□□□□ 0.41
UBE3B-210ENST00000539599 MCM4P33991 863 aa17.6■□□□□ 0.41
UBE3B-210ENST00000539599 CALD1Q05682 793 aaKnown RBP17.6■□□□□ 0.41
UBE3B-210ENST00000539599 NECTIN2Q92692 538 aa17.6■□□□□ 0.41
UBE3B-210ENST00000539599 F6X3S4 739 aa17.59■□□□□ 0.41
UBE3B-210ENST00000539599 BMP2KLQ5H9B9 411 aa17.59■□□□□ 0.41
UBE3B-210ENST00000539599 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
UBE3B-210ENST00000539599 RIMS1Q86UR5 1692 aaKnown RBP17.58■□□□□ 0.41
UBE3B-210ENST00000539599 MON2Q7Z3U7 1717 aa17.58■□□□□ 0.41
UBE3B-210ENST00000539599 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.58■□□□□ 0.41
UBE3B-210ENST00000539599 G2E3Q7L622 706 aa17.58■□□□□ 0.41
UBE3B-210ENST00000539599 ARHGAP45Q92619 1136 aa17.58■□□□□ 0.41
UBE3B-210ENST00000539599 MEIS3Q99687 375 aa17.58■□□□□ 0.41
UBE3B-210ENST00000539599 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.41
UBE3B-210ENST00000539599 PIK3R4Q99570 1358 aa17.58■□□□□ 0.41
UBE3B-210ENST00000539599 TMEM2Q9UHN6 1383 aa17.58■□□□□ 0.41
UBE3B-210ENST00000539599 C3P01024 1663 aa17.58■□□□□ 0.41
UBE3B-210ENST00000539599 ADAMTS13Q76LX8 1427 aa17.57■□□□□ 0.4
UBE3B-210ENST00000539599 GCC1Q96CN9 775 aa17.57■□□□□ 0.4
UBE3B-210ENST00000539599 MSH6P52701 1360 aa17.57■□□□□ 0.4
UBE3B-210ENST00000539599 MAP3K19Q56UN5 1328 aa17.57■□□□□ 0.4
UBE3B-210ENST00000539599 SLC4A10Q6U841 1118 aa17.57■□□□□ 0.4
UBE3B-210ENST00000539599 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
UBE3B-210ENST00000539599 RBM25P49756 843 aaKnown RBP17.57■□□□□ 0.4
UBE3B-210ENST00000539599 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
UBE3B-210ENST00000539599 RBM33Q96EV2 1170 aaKnown RBP17.57■□□□□ 0.4
UBE3B-210ENST00000539599 CHMP5Q9NZZ3 219 aa17.57■□□□□ 0.4
UBE3B-210ENST00000539599 PEAK1Q9H792 1746 aa17.56■□□□□ 0.4
UBE3B-210ENST00000539599 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
UBE3B-210ENST00000539599 PANK2Q9BZ23 570 aa17.56■□□□□ 0.4
UBE3B-210ENST00000539599 REREQ9P2R6 1566 aa17.56■□□□□ 0.4
UBE3B-210ENST00000539599 MTHFSDQ2M296 383 aaKnown RBP17.56■□□□□ 0.4
UBE3B-210ENST00000539599 PLEKHM2Q8IWE5 1019 aa17.56■□□□□ 0.4
UBE3B-210ENST00000539599 API5Q9BZZ5 524 aaKnown RBP17.56■□□□□ 0.4
UBE3B-210ENST00000539599 ITSN1Q15811 1721 aa17.55■□□□□ 0.4
UBE3B-210ENST00000539599 PTPRUQ92729 1446 aa17.55■□□□□ 0.4
UBE3B-210ENST00000539599 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
UBE3B-210ENST00000539599 HSP90AB1P08238 724 aaKnown RBP17.55■□□□□ 0.4
UBE3B-210ENST00000539599 TSHZ3Q63HK5 1081 aa17.55■□□□□ 0.4
UBE3B-210ENST00000539599 RGS12O14924 1447 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms