RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ABCC6O95255 1503 aa31.33■■■□□ 2.61
SCARB1-206ENST00000539320 A0A1W2PP64 1363 aa31.32■■■□□ 2.6
SCARB1-206ENST00000539320 SLC12A5Q9H2X9 1139 aa31.32■■■□□ 2.6
SCARB1-206ENST00000539320 NINLQ9Y2I6 1382 aa31.3■■■□□ 2.6
SCARB1-206ENST00000539320 WDR17Q8IZU2 1322 aa31.3■■■□□ 2.6
SCARB1-206ENST00000539320 TOM1L2Q6ZVM7 507 aa31.3■■■□□ 2.6
SCARB1-206ENST00000539320 NME9Q86XW9 330 aa31.3■■■□□ 2.6
SCARB1-206ENST00000539320 TERF2IPQ9NYB0 399 aa31.3■■■□□ 2.6
SCARB1-206ENST00000539320 AXIN2Q9Y2T1 843 aa31.3■■■□□ 2.6
SCARB1-206ENST00000539320 WNK3Q9BYP7 1800 aa31.28■■■□□ 2.6
SCARB1-206ENST00000539320 USP47Q96K76 1375 aa31.28■■■□□ 2.6
SCARB1-206ENST00000539320 LRRC37A3O60309 1634 aa31.27■■■□□ 2.6
SCARB1-206ENST00000539320 SLC24A1O60721 1099 aa31.27■■■□□ 2.6
SCARB1-206ENST00000539320 EN1Q05925 392 aaPredicted RBP31.27■■■□□ 2.6
SCARB1-206ENST00000539320 RGPD5Q99666 1765 aa31.27■■■□□ 2.6
SCARB1-206ENST00000539320 TRIM37O94972 964 aa31.26■■■□□ 2.59
SCARB1-206ENST00000539320 SRCAPQ6ZRS2 3230 aa31.26■■■□□ 2.59
SCARB1-206ENST00000539320 OVOS2A0A0J9YW53 1432 aa31.24■■■□□ 2.59
SCARB1-206ENST00000539320 OVOS2Q6IE36 1432 aa31.24■■■□□ 2.59
SCARB1-206ENST00000539320 CSB-PGBD3P0DP91 1061 aa31.23■■■□□ 2.59
SCARB1-206ENST00000539320 CLSPNQ9HAW4 1339 aa31.22■■■□□ 2.59
SCARB1-206ENST00000539320 OVOS2A0A0G2JMS6 1433 aa31.21■■■□□ 2.59
SCARB1-206ENST00000539320 LTN1O94822 1766 aa31.2■■■□□ 2.58
SCARB1-206ENST00000539320 CARD10Q9BWT7 1032 aa31.19■■■□□ 2.58
SCARB1-206ENST00000539320 PARD3Q8TEW0 1356 aa31.18■■■□□ 2.58
SCARB1-206ENST00000539320 PEAK1Q9H792 1746 aa31.18■■■□□ 2.58
SCARB1-206ENST00000539320 DDB1Q16531 1140 aa31.18■■■□□ 2.58
SCARB1-206ENST00000539320 CDCA7Q9BWT1 371 aaPredicted RBP31.18■■■□□ 2.58
SCARB1-206ENST00000539320 C11orf95C9JLR9 678 aaPredicted RBP31.17■■■□□ 2.58
SCARB1-206ENST00000539320 EZH2Q15910 746 aaKnown RBP31.17■■■□□ 2.58
SCARB1-206ENST00000539320 PCGF6Q9BYE7 350 aa31.17■■■□□ 2.58
SCARB1-206ENST00000539320 TIMELESSQ9UNS1 1208 aa31.17■■■□□ 2.58
SCARB1-206ENST00000539320 CCDC7Q96M83 1385 aa31.17■■■□□ 2.58
SCARB1-206ENST00000539320 APBA3O96018 575 aa31.16■■■□□ 2.58
SCARB1-206ENST00000539320 TMF1P82094 1093 aa31.16■■■□□ 2.58
SCARB1-206ENST00000539320 ANKRD36BQ8N2N9 1353 aa31.16■■■□□ 2.58
SCARB1-206ENST00000539320 CAMKK2Q96RR4 588 aa31.15■■■□□ 2.58
SCARB1-206ENST00000539320 PSDA5PKW4 1024 aaPredicted RBP31.14■■■□□ 2.58
SCARB1-206ENST00000539320 ERBB3P21860 1342 aa31.14■■■□□ 2.58
SCARB1-206ENST00000539320 RREB1Q92766 1687 aa31.12■■■□□ 2.57
SCARB1-206ENST00000539320 LRP5O75197 1615 aa31.09■■■□□ 2.57
SCARB1-206ENST00000539320 TNS2Q63HR2 1409 aa31.08■■■□□ 2.57
SCARB1-206ENST00000539320 SBF2Q86WG5 1849 aa31.08■■■□□ 2.57
SCARB1-206ENST00000539320 COG3Q96JB2 828 aa31.07■■■□□ 2.56
SCARB1-206ENST00000539320 NUP188Q5SRE5 1749 aa31.07■■■□□ 2.56
SCARB1-206ENST00000539320 BCL9O00512 1426 aa31.07■■■□□ 2.56
SCARB1-206ENST00000539320 CDCA8Q53HL2 280 aa31.06■■■□□ 2.56
SCARB1-206ENST00000539320 MARCH10Q8NA82 808 aaPredicted RBP31.06■■■□□ 2.56
SCARB1-206ENST00000539320 ANKRD24Q8TF21 1146 aa31.06■■■□□ 2.56
SCARB1-206ENST00000539320 NLRP2Q9NX02 1062 aa31.06■■■□□ 2.56
SCARB1-206ENST00000539320 R3HDM1Q15032 1099 aaKnown RBP31.05■■■□□ 2.56
SCARB1-206ENST00000539320 RGPD3A6NKT7 1758 aaPredicted RBP31.02■■■□□ 2.56
SCARB1-206ENST00000539320 RGPD4Q7Z3J3 1758 aa31.02■■■□□ 2.56
SCARB1-206ENST00000539320 FAM208AQ9UK61 1670 aaKnown RBP31.01■■■□□ 2.55
SCARB1-206ENST00000539320 EXOC5O00471 708 aa31.01■■■□□ 2.55
SCARB1-206ENST00000539320 IP6K1Q92551 441 aa31.01■■■□□ 2.55
SCARB1-206ENST00000539320 MYOM1P52179 1685 aa31■■■□□ 2.55
SCARB1-206ENST00000539320 BCL11BQ9C0K0 894 aaPredicted RBP30.99■■■□□ 2.55
SCARB1-206ENST00000539320 MAP3K19Q56UN5 1328 aa30.98■■■□□ 2.55
SCARB1-206ENST00000539320 IL2RBP14784 551 aa30.97■■■□□ 2.55
SCARB1-206ENST00000539320 KIF20BQ96Q89 1820 aa30.96■■■□□ 2.55
SCARB1-206ENST00000539320 RTL1A6NKG5 1358 aa30.95■■■□□ 2.55
SCARB1-206ENST00000539320 GGNBP2Q9H3C7 697 aa30.95■■■□□ 2.55
SCARB1-206ENST00000539320 FYB1O15117 783 aa30.94■■■□□ 2.54
SCARB1-206ENST00000539320 NBPF14Q5TI25 921 aa30.94■■■□□ 2.54
SCARB1-206ENST00000539320 PTF1AQ7RTS3 328 aa30.94■■■□□ 2.54
SCARB1-206ENST00000539320 PLSCR1O15162 318 aa30.93■■■□□ 2.54
SCARB1-206ENST00000539320 HOXC9P31274 260 aa30.93■■■□□ 2.54
SCARB1-206ENST00000539320 AMPHP49418 695 aa30.93■■■□□ 2.54
SCARB1-206ENST00000539320 LTV1Q96GA3 475 aaPredicted RBP30.93■■■□□ 2.54
SCARB1-206ENST00000539320 CCER1Q8TC90 406 aaPredicted RBP30.92■■■□□ 2.54
SCARB1-206ENST00000539320 FBLN1P23142 703 aa30.91■■■□□ 2.54
SCARB1-206ENST00000539320 NHSQ6T4R5 1651 aa30.9■■■□□ 2.54
SCARB1-206ENST00000539320 NSD3Q9BZ95 1437 aa30.9■■■□□ 2.54
SCARB1-206ENST00000539320 RRS1Q15050 365 aaKnown RBP30.88■■■□□ 2.53
SCARB1-206ENST00000539320 CARD14Q9BXL6 1004 aa30.84■■■□□ 2.53
SCARB1-206ENST00000539320 SMG6Q86US8 1419 aaKnown RBP30.82■■■□□ 2.52
SCARB1-206ENST00000539320 RGPD2P0DJD1 1756 aa30.82■■■□□ 2.52
SCARB1-206ENST00000539320 KCNQ2O43526 872 aa30.82■■■□□ 2.52
SCARB1-206ENST00000539320 ACSBG1Q96GR2 724 aa30.82■■■□□ 2.52
SCARB1-206ENST00000539320 ANO8Q9HCE9 1232 aaPredicted RBP30.81■■■□□ 2.52
SCARB1-206ENST00000539320 EIF4G2P78344 907 aaKnown RBP eCLIP30.8■■■□□ 2.522e-9■■■■□ 23.9
SCARB1-206ENST00000539320 FLT4P35916 1363 aa30.79■■■□□ 2.52
SCARB1-206ENST00000539320 KIF24Q5T7B8 1368 aa30.79■■■□□ 2.52
SCARB1-206ENST00000539320 MEGF6O75095 1541 aa30.78■■■□□ 2.52
SCARB1-206ENST00000539320 PROM2Q8N271 834 aa30.78■■■□□ 2.52
SCARB1-206ENST00000539320 INSRP06213 1382 aa30.78■■■□□ 2.52
SCARB1-206ENST00000539320 TXNRD1Q16881 649 aa30.77■■■□□ 2.52
SCARB1-206ENST00000539320 POLR3GLQ9BT43 218 aa30.77■■■□□ 2.52
SCARB1-206ENST00000539320 BTAF1O14981 1849 aa30.77■■■□□ 2.52
SCARB1-206ENST00000539320 KAT6BQ8WYB5 2073 aa30.77■■■□□ 2.52
SCARB1-206ENST00000539320 HSPA5P11021 654 aaKnown RBP30.76■■■□□ 2.51
SCARB1-206ENST00000539320 CGNL1Q0VF96 1302 aa30.74■■■□□ 2.51
SCARB1-206ENST00000539320 SHANK3Q9BYB0 1731 aa30.74■■■□□ 2.51
SCARB1-206ENST00000539320 DDX54Q8TDD1 881 aaKnown RBP30.74■■■□□ 2.51
SCARB1-206ENST00000539320 HSP90AB2PQ58FF8 381 aa30.73■■■□□ 2.51
SCARB1-206ENST00000539320 NBPF6Q5VWK0 638 aa30.73■■■□□ 2.51
SCARB1-206ENST00000539320 NBPF4Q96M43 638 aa30.73■■■□□ 2.51
SCARB1-206ENST00000539320 ANKRD26Q9UPS8 1709 aa30.71■■■□□ 2.51
SCARB1-206ENST00000539320 USHBP1Q8N6Y0 703 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms