RNA–Protein interactions for RNA: ENST00000539172.5

PMFBP1-209, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

APPRIS ALT2 TSL 4

Gene PMFBP1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-209ENST00000539172 ZNF592Q92610 1267 aa10.1□□□□□ -0.79
PMFBP1-209ENST00000539172 PKD2L1Q9P0L9 805 aa10.09□□□□□ -0.79
PMFBP1-209ENST00000539172 ATP9BO43861 1147 aa10.08□□□□□ -0.8
PMFBP1-209ENST00000539172 SKIP12755 728 aa10.08□□□□□ -0.8
PMFBP1-209ENST00000539172 LMOD1P29536 600 aaPredicted RBP10.08□□□□□ -0.8
PMFBP1-209ENST00000539172 VASH1Q7L8A9 365 aaPredicted RBP10.08□□□□□ -0.8
PMFBP1-209ENST00000539172 RNF135Q8IUD6 432 aa10.08□□□□□ -0.8
PMFBP1-209ENST00000539172 CCDC85AQ96PX6 553 aaPredicted RBP10.08□□□□□ -0.8
PMFBP1-209ENST00000539172 KCTD15Q96SI1 283 aaPredicted RBP10.08□□□□□ -0.8
PMFBP1-209ENST00000539172 ESPNB1AK53 854 aa10.07□□□□□ -0.8
PMFBP1-209ENST00000539172 RAB15P59190 212 aa10.07□□□□□ -0.8
PMFBP1-209ENST00000539172 NBPF20Q3BBV1 942 aa10.07□□□□□ -0.8
PMFBP1-209ENST00000539172 CDK15Q96Q40 435 aa10.07□□□□□ -0.8
PMFBP1-209ENST00000539172 MAFBQ9Y5Q3 323 aaPredicted RBP10.07□□□□□ -0.8
PMFBP1-209ENST00000539172 GRM5P41594 1212 aa10.06□□□□□ -0.8
PMFBP1-209ENST00000539172 DEPDC4Q8N2C3 294 aa10.06□□□□□ -0.8
PMFBP1-209ENST00000539172 CDV3Q9UKY7 258 aaKnown RBP10.06□□□□□ -0.8
PMFBP1-209ENST00000539172 MAP4K5Q9Y4K4 846 aa10.06□□□□□ -0.8
PMFBP1-209ENST00000539172 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.05□□□□□ -0.8
PMFBP1-209ENST00000539172 PLPP7Q8NBV4 271 aa10.05□□□□□ -0.8
PMFBP1-209ENST00000539172 NFATC2IPQ8NCF5 419 aa10.05□□□□□ -0.8
PMFBP1-209ENST00000539172 CHIC2Q9UKJ5 165 aa10.05□□□□□ -0.8
PMFBP1-209ENST00000539172 USP17L5A8MUK1 530 aa10.04□□□□□ -0.8
PMFBP1-209ENST00000539172 TNFRSF10AO00220 468 aa10.04□□□□□ -0.8
PMFBP1-209ENST00000539172 GDF9O60383 454 aa10.04□□□□□ -0.8
PMFBP1-209ENST00000539172 INTS6LQ5JSJ4 861 aaKnown RBP10.04□□□□□ -0.8
PMFBP1-209ENST00000539172 TRAF7Q6Q0C0 670 aa10.04□□□□□ -0.8
PMFBP1-209ENST00000539172 MPNDQ8N594 471 aa10.04□□□□□ -0.8
PMFBP1-209ENST00000539172 USP17L3A6NCW0 530 aa10.03□□□□□ -0.8
PMFBP1-209ENST00000539172 USP17L4A6NCW7 530 aa10.03□□□□□ -0.8
PMFBP1-209ENST00000539172 FSHRP23945 695 aa10.03□□□□□ -0.8
PMFBP1-209ENST00000539172 CDCA8Q53HL2 280 aa10.03□□□□□ -0.8
PMFBP1-209ENST00000539172 USP17L2Q6R6M4 530 aa10.03□□□□□ -0.8
PMFBP1-209ENST00000539172 TRIM67Q6ZTA4 783 aa10.03□□□□□ -0.8
PMFBP1-209ENST00000539172 USP17L1Q7RTZ2 530 aa10.03□□□□□ -0.8
PMFBP1-209ENST00000539172 CDCA7Q9BWT1 371 aaPredicted RBP10.03□□□□□ -0.8
PMFBP1-209ENST00000539172 ALDH1A1P00352 501 aa10.02□□□□□ -0.81
PMFBP1-209ENST00000539172 SRPK2P78362 688 aaKnown RBP10.02□□□□□ -0.81
PMFBP1-209ENST00000539172 NCOA4Q13772 614 aa10.02□□□□□ -0.81
PMFBP1-209ENST00000539172 RNF20Q5VTR2 975 aa10.02□□□□□ -0.81
PMFBP1-209ENST00000539172 ERVH48-1M5A8F1 160 aa10.01□□□□□ -0.81
PMFBP1-209ENST00000539172 ADH1CP00326 375 aa10.01□□□□□ -0.81
PMFBP1-209ENST00000539172 SEPT12Q8IYM1 358 aa10.01□□□□□ -0.81
PMFBP1-209ENST00000539172 DOLKQ9UPQ8 538 aa10.01□□□□□ -0.81
PMFBP1-209ENST00000539172 PCDHB11Q9Y5F2 797 aa10.01□□□□□ -0.81
PMFBP1-209ENST00000539172 NR3C2P08235 984 aa10□□□□□ -0.81
PMFBP1-209ENST00000539172 PLEKHM2Q8IWE5 1019 aa10□□□□□ -0.81
PMFBP1-209ENST00000539172 TMPRSS4Q9NRS4 437 aa10□□□□□ -0.81
PMFBP1-209ENST00000539172 J3QL48 77 aa9.99□□□□□ -0.81
PMFBP1-209ENST00000539172 MAP7D1Q3KQU3 841 aa9.99□□□□□ -0.81
PMFBP1-209ENST00000539172 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
PMFBP1-209ENST00000539172 KANK4Q5T7N3 995 aaPredicted RBP9.99□□□□□ -0.81
PMFBP1-209ENST00000539172 SNIP1Q8TAD8 396 aaKnown RBP9.99□□□□□ -0.81
PMFBP1-209ENST00000539172 PBXIP1Q96AQ6 731 aa9.99□□□□□ -0.81
PMFBP1-209ENST00000539172 NR5A1Q13285 461 aa9.98□□□□□ -0.81
PMFBP1-209ENST00000539172 TTC24A2A3L6 582 aaPredicted RBP9.97□□□□□ -0.81
PMFBP1-209ENST00000539172 SCTRP47872 440 aa9.97□□□□□ -0.81
PMFBP1-209ENST00000539172 EML3Q32P44 896 aa9.97□□□□□ -0.81
PMFBP1-209ENST00000539172 CYP4X1Q8N118 509 aa9.97□□□□□ -0.81
PMFBP1-209ENST00000539172 ARXQ96QS3 562 aa9.97□□□□□ -0.81
PMFBP1-209ENST00000539172 VRTNQ9H8Y1 702 aa9.97□□□□□ -0.81
PMFBP1-209ENST00000539172 TOR4AQ9NXH8 423 aa9.97□□□□□ -0.81
PMFBP1-209ENST00000539172 MKRN1Q9UHC7 482 aaKnown RBP9.97□□□□□ -0.81
PMFBP1-209ENST00000539172 NNTQ13423 1086 aa9.96□□□□□ -0.82
PMFBP1-209ENST00000539172 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.82
PMFBP1-209ENST00000539172 CCDC116Q8IYX3 515 aa9.96□□□□□ -0.82
PMFBP1-209ENST00000539172 WASF2Q9Y6W5 498 aa9.96□□□□□ -0.82
PMFBP1-209ENST00000539172 LZTS3O60299 673 aaPredicted RBP9.95□□□□□ -0.82
PMFBP1-209ENST00000539172 PPP1R15AO75807 674 aaPredicted RBP9.95□□□□□ -0.82
PMFBP1-209ENST00000539172 RGS20O76081 388 aa9.94□□□□□ -0.82
PMFBP1-209ENST00000539172 SMPD1P17405 629 aa9.94□□□□□ -0.82
PMFBP1-209ENST00000539172 PRR20EP86478 221 aa9.94□□□□□ -0.82
PMFBP1-209ENST00000539172 PRR20CP86479 221 aa9.94□□□□□ -0.82
PMFBP1-209ENST00000539172 PRR20DP86480 221 aa9.94□□□□□ -0.82
PMFBP1-209ENST00000539172 PRR20BP86481 221 aa9.94□□□□□ -0.82
PMFBP1-209ENST00000539172 PRR20AP86496 221 aa9.94□□□□□ -0.82
PMFBP1-209ENST00000539172 ZNF784Q8NCA9 323 aaPredicted RBP9.94□□□□□ -0.82
PMFBP1-209ENST00000539172 CYLDQ9NQC7 956 aa9.94□□□□□ -0.82
PMFBP1-209ENST00000539172 DHX9Q08211 1270 aaKnown RBP9.93□□□□□ -0.82
PMFBP1-209ENST00000539172 CCDC125Q86Z20 511 aa9.93□□□□□ -0.82
PMFBP1-209ENST00000539172 HOMEZQ8IX15 550 aa9.93□□□□□ -0.82
PMFBP1-209ENST00000539172 NOD1Q9Y239 953 aa9.93□□□□□ -0.82
PMFBP1-209ENST00000539172 USP4Q13107 963 aa9.92□□□□□ -0.82
PMFBP1-209ENST00000539172 CRTC2Q53ET0 693 aaPredicted RBP9.92□□□□□ -0.82
PMFBP1-209ENST00000539172 PDZRN3Q9UPQ7 1066 aa9.92□□□□□ -0.82
PMFBP1-209ENST00000539172 ACIN1Q9UKV3 1341 aaKnown RBP9.91□□□□□ -0.82
PMFBP1-209ENST00000539172 ATP5J2-PTCD1G3V325 749 aa9.91□□□□□ -0.82
PMFBP1-209ENST00000539172 LILRA1O75019 489 aa9.91□□□□□ -0.82
PMFBP1-209ENST00000539172 RASA1P20936 1047 aa9.91□□□□□ -0.82
PMFBP1-209ENST00000539172 ERVK-9P63128 1117 aa9.91□□□□□ -0.82
PMFBP1-209ENST00000539172 CLDN10P78369 228 aa9.91□□□□□ -0.82
PMFBP1-209ENST00000539172 ATG7O95352 703 aa9.9□□□□□ -0.82
PMFBP1-209ENST00000539172 ADD1P35611 737 aaKnown RBP9.9□□□□□ -0.82
PMFBP1-209ENST00000539172 CC2D2BQ6DHV5 1058 aa9.9□□□□□ -0.82
PMFBP1-209ENST00000539172 OGFOD1Q8N543 542 aa9.9□□□□□ -0.82
PMFBP1-209ENST00000539172 RETREG2Q8NC44 543 aa9.9□□□□□ -0.82
PMFBP1-209ENST00000539172 HPS1Q92902 700 aa9.9□□□□□ -0.82
PMFBP1-209ENST00000539172 KLF16Q9BXK1 252 aaPredicted RBP9.9□□□□□ -0.82
PMFBP1-209ENST00000539172 KIAA1024Q9UPX6 916 aa9.9□□□□□ -0.82
PMFBP1-209ENST00000539172 PCDHGA11Q9Y5H2 935 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms