RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 WDR17Q8IZU2 1322 aa20.49■□□□□ 0.87
PBX3-212ENST00000538998 NBPF1Q3BBV0 1214 aa20.48■□□□□ 0.87
PBX3-212ENST00000538998 ZBTB7AO95365 584 aa20.47■□□□□ 0.87
PBX3-212ENST00000538998 PTF1AQ7RTS3 328 aa20.47■□□□□ 0.87
PBX3-212ENST00000538998 PROM2Q8N271 834 aa20.47■□□□□ 0.87
PBX3-212ENST00000538998 MARCH10Q8NA82 808 aaPredicted RBP20.47■□□□□ 0.87
PBX3-212ENST00000538998 CPSF1Q10570 1443 aaKnown RBP20.46■□□□□ 0.87
PBX3-212ENST00000538998 PDGFDQ9GZP0 370 aaPredicted RBP20.46■□□□□ 0.87
PBX3-212ENST00000538998 CABP1Q9NZU7 370 aa20.46■□□□□ 0.87
PBX3-212ENST00000538998 WNK3Q9BYP7 1800 aa20.46■□□□□ 0.87
PBX3-212ENST00000538998 PTGER2P43116 358 aa20.45■□□□□ 0.86
PBX3-212ENST00000538998 STK32BQ9NY57 414 aa20.45■□□□□ 0.86
PBX3-212ENST00000538998 MYOM1P52179 1685 aa20.45■□□□□ 0.86
PBX3-212ENST00000538998 COL18A1P39060 1754 aa20.44■□□□□ 0.86
PBX3-212ENST00000538998 AXIN2Q9Y2T1 843 aa20.44■□□□□ 0.86
PBX3-212ENST00000538998 PIK3C2AO00443 1686 aa20.44■□□□□ 0.86
PBX3-212ENST00000538998 QRICH2Q9H0J4 1663 aa20.43■□□□□ 0.86
PBX3-212ENST00000538998 AKAP12Q02952 1782 aa20.43■□□□□ 0.86
PBX3-212ENST00000538998 SLC15A2Q16348 729 aa20.42■□□□□ 0.86
PBX3-212ENST00000538998 TXNRD1Q16881 649 aa20.42■□□□□ 0.86
PBX3-212ENST00000538998 ARHGEF25Q86VW2 580 aa20.42■□□□□ 0.86
PBX3-212ENST00000538998 ZNF784Q8NCA9 323 aaPredicted RBP20.42■□□□□ 0.86
PBX3-212ENST00000538998 KCNH5Q8NCM2 988 aa20.42■□□□□ 0.86
PBX3-212ENST00000538998 CARD10Q9BWT7 1032 aa20.42■□□□□ 0.86
PBX3-212ENST00000538998 ATF5Q9Y2D1 282 aaPredicted RBP20.42■□□□□ 0.86
PBX3-212ENST00000538998 EXOC5O00471 708 aa20.4■□□□□ 0.86
PBX3-212ENST00000538998 CSB-PGBD3P0DP91 1061 aa20.4■□□□□ 0.86
PBX3-212ENST00000538998 FHDC1Q9C0D6 1143 aaPredicted RBP20.4■□□□□ 0.86
PBX3-212ENST00000538998 MTFR1LQ9H019 292 aa20.4■□□□□ 0.86
PBX3-212ENST00000538998 EVC2Q86UK5 1308 aa20.39■□□□□ 0.85
PBX3-212ENST00000538998 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
PBX3-212ENST00000538998 CCDC7Q96M83 1385 aa20.38■□□□□ 0.85
PBX3-212ENST00000538998 TNS2Q63HR2 1409 aa20.37■□□□□ 0.85
PBX3-212ENST00000538998 ZNF692Q9BU19 519 aaPredicted RBP20.37■□□□□ 0.85
PBX3-212ENST00000538998 TTC21BQ7Z4L5 1316 aa20.36■□□□□ 0.85
PBX3-212ENST00000538998 TTC21AQ8NDW8 1320 aa20.36■□□□□ 0.85
PBX3-212ENST00000538998 SGIP1Q9BQI5 828 aa20.36■□□□□ 0.85
PBX3-212ENST00000538998 ABCC6O95255 1503 aa20.36■□□□□ 0.85
PBX3-212ENST00000538998 TRPM1Q7Z4N2 1603 aa20.35■□□□□ 0.85
PBX3-212ENST00000538998 SOX12O15370 315 aa20.34■□□□□ 0.85
PBX3-212ENST00000538998 NFAT5O94916 1531 aa20.33■□□□□ 0.85
PBX3-212ENST00000538998 MAP3K5Q99683 1374 aa20.33■□□□□ 0.84
PBX3-212ENST00000538998 NHSQ6T4R5 1651 aa20.32■□□□□ 0.84
PBX3-212ENST00000538998 ARXQ96QS3 562 aa20.32■□□□□ 0.84
PBX3-212ENST00000538998 RGPD5Q99666 1765 aa20.31■□□□□ 0.84
PBX3-212ENST00000538998 PAPPAQ13219 1627 aa20.3■□□□□ 0.84
PBX3-212ENST00000538998 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
PBX3-212ENST00000538998 UTRNP46939 3433 aa20.28■□□□□ 0.84
PBX3-212ENST00000538998 C1QTNF8P60827 252 aa20.28■□□□□ 0.84
PBX3-212ENST00000538998 ACSBG1Q96GR2 724 aa20.28■□□□□ 0.84
PBX3-212ENST00000538998 KTN1Q86UP2 1357 aaKnown RBP20.28■□□□□ 0.84
PBX3-212ENST00000538998 ERBB3P21860 1342 aa20.27■□□□□ 0.84
PBX3-212ENST00000538998 IL2RBP14784 551 aa20.26■□□□□ 0.83
PBX3-212ENST00000538998 NLRP2Q9NX02 1062 aa20.26■□□□□ 0.83
PBX3-212ENST00000538998 CHD4Q14839 1912 aa20.25■□□□□ 0.83
PBX3-212ENST00000538998 USP31Q70CQ4 1352 aa20.23■□□□□ 0.83
PBX3-212ENST00000538998 GPR162Q16538 588 aa20.23■□□□□ 0.83
PBX3-212ENST00000538998 ZNF827Q17R98 1081 aa20.23■□□□□ 0.83
PBX3-212ENST00000538998 L3MBTL2Q969R5 705 aa20.23■□□□□ 0.83
PBX3-212ENST00000538998 ROCK2O75116 1388 aaKnown RBP20.22■□□□□ 0.83
PBX3-212ENST00000538998 SLC16A10Q8TF71 515 aa20.22■□□□□ 0.83
PBX3-212ENST00000538998 BTAF1O14981 1849 aa20.22■□□□□ 0.83
PBX3-212ENST00000538998 LRRC4BQ9NT99 713 aa20.21■□□□□ 0.83
PBX3-212ENST00000538998 USP54Q70EL1 1684 aa20.21■□□□□ 0.83
PBX3-212ENST00000538998 MON2Q7Z3U7 1717 aa20.21■□□□□ 0.83
PBX3-212ENST00000538998 SLC27A3Q5K4L6 730 aa20.2■□□□□ 0.82
PBX3-212ENST00000538998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.2■□□□□ 0.82
PBX3-212ENST00000538998 POLD1P28340 1107 aa20.19■□□□□ 0.82
PBX3-212ENST00000538998 ANKRD24Q8TF21 1146 aa20.19■□□□□ 0.82
PBX3-212ENST00000538998 AKT1S1Q96B36 256 aa20.19■□□□□ 0.82
PBX3-212ENST00000538998 GIGYF1O75420 1035 aaPredicted RBP20.17■□□□□ 0.82
PBX3-212ENST00000538998 NME9Q86XW9 330 aa20.16■□□□□ 0.82
PBX3-212ENST00000538998 KLHL34Q8N239 644 aa20.16■□□□□ 0.82
PBX3-212ENST00000538998 SBNO2Q9Y2G9 1366 aa20.16■□□□□ 0.82
PBX3-212ENST00000538998 QSER1Q2KHR3 1735 aa20.16■□□□□ 0.82
PBX3-212ENST00000538998 PNPLA7Q6ZV29 1317 aa20.15■□□□□ 0.82
PBX3-212ENST00000538998 LTN1O94822 1766 aa20.15■□□□□ 0.82
PBX3-212ENST00000538998 CD163L1Q9NR16 1453 aa20.14■□□□□ 0.81
PBX3-212ENST00000538998 HDGFL2Q7Z4V5 671 aaPredicted RBP20.13■□□□□ 0.81
PBX3-212ENST00000538998 PELP1Q8IZL8 1130 aaKnown RBP20.13■□□□□ 0.81
PBX3-212ENST00000538998 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
PBX3-212ENST00000538998 COL24A1Q17RW2 1714 aa20.13■□□□□ 0.81
PBX3-212ENST00000538998 EDC4Q6P2E9 1401 aaKnown RBP20.12■□□□□ 0.81
PBX3-212ENST00000538998 DDX54Q8TDD1 881 aaKnown RBP20.12■□□□□ 0.81
PBX3-212ENST00000538998 TMC1Q8TDI8 760 aa20.1■□□□□ 0.81
PBX3-212ENST00000538998 ANKRD36BQ8N2N9 1353 aa20.09■□□□□ 0.81
PBX3-212ENST00000538998 NLGN2Q8NFZ4 835 aa20.09■□□□□ 0.81
PBX3-212ENST00000538998 IP6K1Q92551 441 aa20.09■□□□□ 0.81
PBX3-212ENST00000538998 SYTL4Q96C24 671 aaPredicted RBP20.09■□□□□ 0.81
PBX3-212ENST00000538998 FAM208AQ9UK61 1670 aaKnown RBP20.09■□□□□ 0.81
PBX3-212ENST00000538998 GRIN3BO60391 1043 aa20.08■□□□□ 0.81
PBX3-212ENST00000538998 TERF2IPQ9NYB0 399 aa20.08■□□□□ 0.81
PBX3-212ENST00000538998 IFFO2Q5TF58 517 aa20.07■□□□□ 0.8
PBX3-212ENST00000538998 SIN3AQ96ST3 1273 aa20.07■□□□□ 0.8
PBX3-212ENST00000538998 SHANK3Q9BYB0 1731 aa20.07■□□□□ 0.8
PBX3-212ENST00000538998 PRIM1P49642 420 aaKnown RBP20.06■□□□□ 0.8
PBX3-212ENST00000538998 KCNQ4P56696 695 aa20.06■□□□□ 0.8
PBX3-212ENST00000538998 SLC12A5Q9H2X9 1139 aa20.06■□□□□ 0.8
PBX3-212ENST00000538998 TUBGCP6Q96RT7 1819 aa20.05■□□□□ 0.8
PBX3-212ENST00000538998 LTV1Q96GA3 475 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms