RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CGNL1Q0VF96 1302 aa18.06■□□□□ 0.48
CHFR-216ENST00000538235 MAP3K19Q56UN5 1328 aa18.06■□□□□ 0.48
CHFR-216ENST00000538235 ZBTB7CA1YPR0 619 aa18.05■□□□□ 0.48
CHFR-216ENST00000538235 RRS1Q15050 365 aaKnown RBP18.05■□□□□ 0.48
CHFR-216ENST00000538235 COG3Q96JB2 828 aa18.05■□□□□ 0.48
CHFR-216ENST00000538235 SMG6Q86US8 1419 aaKnown RBP18.05■□□□□ 0.48
CHFR-216ENST00000538235 UNC5CLQ8IV45 518 aa18.04■□□□□ 0.48
CHFR-216ENST00000538235 NSD2O96028 1365 aa18.04■□□□□ 0.48
CHFR-216ENST00000538235 LRRC37A3O60309 1634 aa18.03■□□□□ 0.48
CHFR-216ENST00000538235 KCNH5Q8NCM2 988 aa18.03■□□□□ 0.48
CHFR-216ENST00000538235 SHANK3Q9BYB0 1731 aa18.03■□□□□ 0.48
CHFR-216ENST00000538235 PARP4Q9UKK3 1724 aaKnown RBP18.02■□□□□ 0.48
CHFR-216ENST00000538235 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.48
CHFR-216ENST00000538235 RGPD1P0DJD0 1748 aa18.01■□□□□ 0.47
CHFR-216ENST00000538235 ZNF772Q68DY9 489 aaPredicted RBP18.01■□□□□ 0.47
CHFR-216ENST00000538235 QTRT2Q9H974 415 aaKnown RBP18.01■□□□□ 0.47
CHFR-216ENST00000538235 VPS72Q15906 364 aa18■□□□□ 0.47
CHFR-216ENST00000538235 LARP1Q6PKG0 1096 aaKnown RBP18■□□□□ 0.47
CHFR-216ENST00000538235 NPC1L1Q9UHC9 1359 aa18■□□□□ 0.47
CHFR-216ENST00000538235 CC2D1BQ5T0F9 858 aaKnown RBP17.99■□□□□ 0.47
CHFR-216ENST00000538235 STRN4Q9NRL3 753 aa17.99■□□□□ 0.47
CHFR-216ENST00000538235 KNSTRNQ9Y448 316 aa17.99■□□□□ 0.47
CHFR-216ENST00000538235 RTL1A6NKG5 1358 aa17.99■□□□□ 0.47
CHFR-216ENST00000538235 CDK12Q9NYV4 1490 aaPredicted RBP17.99■□□□□ 0.47
CHFR-216ENST00000538235 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
CHFR-216ENST00000538235 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
CHFR-216ENST00000538235 BLMP54132 1417 aaPredicted RBP17.98■□□□□ 0.47
CHFR-216ENST00000538235 HOXC9P31274 260 aa17.98■□□□□ 0.47
CHFR-216ENST00000538235 TNNT2P45379 298 aaPredicted RBP17.98■□□□□ 0.47
CHFR-216ENST00000538235 TRPC5Q9UL62 973 aaPredicted RBP17.98■□□□□ 0.47
CHFR-216ENST00000538235 COL3A1P02461 1466 aaPredicted RBP17.98■□□□□ 0.47
CHFR-216ENST00000538235 ERBB3P21860 1342 aa17.98■□□□□ 0.47
CHFR-216ENST00000538235 DDX10Q13206 875 aaKnown RBP17.97■□□□□ 0.47
CHFR-216ENST00000538235 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
CHFR-216ENST00000538235 CRB1P82279 1406 aa17.97■□□□□ 0.47
CHFR-216ENST00000538235 SPATA31A1Q5TZJ5 1347 aa17.97■□□□□ 0.47
CHFR-216ENST00000538235 CNGB1Q14028 1251 aaPredicted RBP17.96■□□□□ 0.47
CHFR-216ENST00000538235 GJD4Q96KN9 370 aaPredicted RBP17.96■□□□□ 0.47
CHFR-216ENST00000538235 DISP2A7MBM2 1401 aa17.96■□□□□ 0.47
CHFR-216ENST00000538235 WDR17Q8IZU2 1322 aa17.96■□□□□ 0.46
CHFR-216ENST00000538235 IP6K1Q92551 441 aa17.95■□□□□ 0.46
CHFR-216ENST00000538235 FLT4P35916 1363 aa17.94■□□□□ 0.46
CHFR-216ENST00000538235 ZNF316A6NFI3 1004 aaPredicted RBP17.94■□□□□ 0.46
CHFR-216ENST00000538235 RBM6P78332 1123 aaKnown RBP17.94■□□□□ 0.46
CHFR-216ENST00000538235 HSP90AB2PQ58FF8 381 aa17.94■□□□□ 0.46
CHFR-216ENST00000538235 NCAPD2Q15021 1401 aa17.93■□□□□ 0.46
CHFR-216ENST00000538235 EP400Q96L91 3159 aa17.93■□□□□ 0.46
CHFR-216ENST00000538235 INSRP06213 1382 aa17.92■□□□□ 0.46
CHFR-216ENST00000538235 PARD3Q8TEW0 1356 aa17.92■□□□□ 0.46
CHFR-216ENST00000538235 RXRBP28702 533 aa17.92■□□□□ 0.46
CHFR-216ENST00000538235 MORC1Q86VD1 984 aa17.92■□□□□ 0.46
CHFR-216ENST00000538235 ANKRD24Q8TF21 1146 aa17.92■□□□□ 0.46
CHFR-216ENST00000538235 PKD1L3Q7Z443 1732 aa17.91■□□□□ 0.46
CHFR-216ENST00000538235 MEGF6O75095 1541 aa17.91■□□□□ 0.46
CHFR-216ENST00000538235 KIF24Q5T7B8 1368 aa17.91■□□□□ 0.46
CHFR-216ENST00000538235 AMPHP49418 695 aa17.9■□□□□ 0.46
CHFR-216ENST00000538235 FAM98CQ17RN3 349 aaKnown RBP17.9■□□□□ 0.46
CHFR-216ENST00000538235 LTV1Q96GA3 475 aaPredicted RBP17.9■□□□□ 0.46
CHFR-216ENST00000538235 USP35Q9P2H5 1018 aa17.9■□□□□ 0.46
CHFR-216ENST00000538235 SBF2Q86WG5 1849 aa17.9■□□□□ 0.46
CHFR-216ENST00000538235 CCDC9Q9Y3X0 531 aaKnown RBP17.89■□□□□ 0.45
CHFR-216ENST00000538235 ONECUT3O60422 494 aaPredicted RBP17.88■□□□□ 0.45
CHFR-216ENST00000538235 TNS1Q9HBL0 1735 aaKnown RBP17.87■□□□□ 0.45
CHFR-216ENST00000538235 EVA1CP58658 441 aa17.87■□□□□ 0.45
CHFR-216ENST00000538235 USHBP1Q8N6Y0 703 aa17.87■□□□□ 0.45
CHFR-216ENST00000538235 PPM1GO15355 546 aaPredicted RBP17.86■□□□□ 0.45
CHFR-216ENST00000538235 NBPF6Q5VWK0 638 aa17.86■□□□□ 0.45
CHFR-216ENST00000538235 TOM1L2Q6ZVM7 507 aa17.86■□□□□ 0.45
CHFR-216ENST00000538235 NBPF4Q96M43 638 aa17.86■□□□□ 0.45
CHFR-216ENST00000538235 CARD10Q9BWT7 1032 aa17.86■□□□□ 0.45
CHFR-216ENST00000538235 EIF4A2Q14240 407 aaKnown RBP17.85■□□□□ 0.45
CHFR-216ENST00000538235 SEPT12Q8IYM1 358 aa17.85■□□□□ 0.45
CHFR-216ENST00000538235 TOGARAM1Q9Y4F4 1720 aa17.85■□□□□ 0.45
CHFR-216ENST00000538235 VIRMAQ69YN4 1812 aaKnown RBP17.84■□□□□ 0.45
CHFR-216ENST00000538235 CSB-PGBD3P0DP91 1061 aa17.84■□□□□ 0.45
CHFR-216ENST00000538235 PPP2R1AP30153 589 aa17.84■□□□□ 0.45
CHFR-216ENST00000538235 MTHFSP49914 203 aa17.84■□□□□ 0.45
CHFR-216ENST00000538235 BARGINQ6ZT62 677 aa17.84■□□□□ 0.45
CHFR-216ENST00000538235 TCP11L2Q8N4U5 519 aa17.84■□□□□ 0.45
CHFR-216ENST00000538235 TNS2Q63HR2 1409 aa17.83■□□□□ 0.45
CHFR-216ENST00000538235 NLRP2Q9NX02 1062 aa17.83■□□□□ 0.44
CHFR-216ENST00000538235 DOT1LQ8TEK3 1739 aa17.83■□□□□ 0.44
CHFR-216ENST00000538235 FAM182BQ5T319 152 aa17.82■□□□□ 0.44
CHFR-216ENST00000538235 EYA1Q99502 592 aa17.81■□□□□ 0.44
CHFR-216ENST00000538235 OVOS2A0A0G2JMS6 1433 aa17.81■□□□□ 0.44
CHFR-216ENST00000538235 IGSF1Q8N6C5 1336 aa17.8■□□□□ 0.44
CHFR-216ENST00000538235 IL13P35225 146 aa17.79■□□□□ 0.44
CHFR-216ENST00000538235 AEBP1Q8IUX7 1158 aa17.79■□□□□ 0.44
CHFR-216ENST00000538235 THRAP3Q9Y2W1 955 aaKnown RBP17.79■□□□□ 0.44
CHFR-216ENST00000538235 NHSQ6T4R5 1651 aa17.77■□□□□ 0.44
CHFR-216ENST00000538235 ITGB4P16144 1822 aa17.76■□□□□ 0.43
CHFR-216ENST00000538235 KDRP35968 1356 aa17.76■□□□□ 0.43
CHFR-216ENST00000538235 A0A0G2JS52 829 aa17.75■□□□□ 0.43
CHFR-216ENST00000538235 MYT1Q01538 1121 aa17.75■□□□□ 0.43
CHFR-216ENST00000538235 PRKRIP1Q9H875 184 aaPredicted RBP17.75■□□□□ 0.43
CHFR-216ENST00000538235 IL2RBP14784 551 aa17.74■□□□□ 0.43
CHFR-216ENST00000538235 KRT27Q7Z3Y8 459 aa17.74■□□□□ 0.43
CHFR-216ENST00000538235 MARCH10Q8NA82 808 aaPredicted RBP17.74■□□□□ 0.43
CHFR-216ENST00000538235 BTAF1O14981 1849 aa17.73■□□□□ 0.43
CHFR-216ENST00000538235 DLG5Q8TDM6 1919 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms