RNA–Protein interactions for RNA: ENST00000538051.5

LMO3-219, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-219ENST00000538051 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
LMO3-219ENST00000538051 TNNT2P45379 298 aaPredicted RBP16.62■□□□□ 0.25
LMO3-219ENST00000538051 CNGB1Q14028 1251 aaPredicted RBP16.62■□□□□ 0.25
LMO3-219ENST00000538051 ARHGEF25Q86VW2 580 aa16.62■□□□□ 0.25
LMO3-219ENST00000538051 MAP3K19Q56UN5 1328 aa16.62■□□□□ 0.25
LMO3-219ENST00000538051 RGS12O14924 1447 aa16.62■□□□□ 0.25
LMO3-219ENST00000538051 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
LMO3-219ENST00000538051 USP21Q9UK80 565 aa16.61■□□□□ 0.25
LMO3-219ENST00000538051 FAM208AQ9UK61 1670 aaKnown RBP16.61■□□□□ 0.25
LMO3-219ENST00000538051 PEAK1Q9H792 1746 aa16.6■□□□□ 0.25
LMO3-219ENST00000538051 AMPHP49418 695 aa16.6■□□□□ 0.25
LMO3-219ENST00000538051 IP6K1Q92551 441 aa16.6■□□□□ 0.25
LMO3-219ENST00000538051 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
LMO3-219ENST00000538051 DIAPH1O60610 1272 aaKnown RBP16.59■□□□□ 0.25
LMO3-219ENST00000538051 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.25
LMO3-219ENST00000538051 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
LMO3-219ENST00000538051 PLEKHG2Q9H7P9 1386 aa16.59■□□□□ 0.25
LMO3-219ENST00000538051 RRS1Q15050 365 aaKnown RBP16.58■□□□□ 0.24
LMO3-219ENST00000538051 EMILIN1Q9Y6C2 1016 aa16.58■□□□□ 0.24
LMO3-219ENST00000538051 COL18A1P39060 1754 aa16.57■□□□□ 0.24
LMO3-219ENST00000538051 HAP1P54257 671 aaPredicted RBP16.57■□□□□ 0.24
LMO3-219ENST00000538051 TRPC5Q9UL62 973 aaPredicted RBP16.57■□□□□ 0.24
LMO3-219ENST00000538051 COL14A1Q05707 1796 aaKnown RBP16.56■□□□□ 0.24
LMO3-219ENST00000538051 HOXC9P31274 260 aa16.56■□□□□ 0.24
LMO3-219ENST00000538051 NGEFQ8N5V2 710 aa16.56■□□□□ 0.24
LMO3-219ENST00000538051 RGPD1P0DJD0 1748 aa16.56■□□□□ 0.24
LMO3-219ENST00000538051 LMO7Q8WWI1 1683 aa16.56■□□□□ 0.24
LMO3-219ENST00000538051 KIAA0232Q92628 1395 aa16.54■□□□□ 0.24
LMO3-219ENST00000538051 PPM1GO15355 546 aaPredicted RBP16.54■□□□□ 0.24
LMO3-219ENST00000538051 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
LMO3-219ENST00000538051 IL13P35225 146 aa16.53■□□□□ 0.24
LMO3-219ENST00000538051 CCDC184Q52MB2 194 aa16.53■□□□□ 0.24
LMO3-219ENST00000538051 PRDM11Q9NQV5 511 aa16.53■□□□□ 0.24
LMO3-219ENST00000538051 NWD2Q9ULI1 1742 aa16.53■□□□□ 0.24
LMO3-219ENST00000538051 CAMTA1Q9Y6Y1 1673 aa16.53■□□□□ 0.24
LMO3-219ENST00000538051 SOX12O15370 315 aa16.52■□□□□ 0.24
LMO3-219ENST00000538051 FCHSD2O94868 740 aa16.52■□□□□ 0.24
LMO3-219ENST00000538051 FNBP4Q8N3X1 1017 aaPredicted RBP16.52■□□□□ 0.24
LMO3-219ENST00000538051 NCAPD2Q15021 1401 aa16.52■□□□□ 0.23
LMO3-219ENST00000538051 KDRP35968 1356 aa16.51■□□□□ 0.23
LMO3-219ENST00000538051 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
LMO3-219ENST00000538051 HSP90AB2PQ58FF8 381 aa16.51■□□□□ 0.23
LMO3-219ENST00000538051 ERBB3P21860 1342 aa16.5■□□□□ 0.23
LMO3-219ENST00000538051 IGSF1Q8N6C5 1336 aa16.5■□□□□ 0.23
LMO3-219ENST00000538051 FBLN1P23142 703 aa16.5■□□□□ 0.23
LMO3-219ENST00000538051 ZC3H6P61129 1189 aaKnown RBP16.5■□□□□ 0.23
LMO3-219ENST00000538051 CABLES1Q8TDN4 633 aa16.5■□□□□ 0.23
LMO3-219ENST00000538051 NEFMP07197 916 aa16.49■□□□□ 0.23
LMO3-219ENST00000538051 FAM9BQ8IZU0 186 aa16.49■□□□□ 0.23
LMO3-219ENST00000538051 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
LMO3-219ENST00000538051 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
LMO3-219ENST00000538051 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
LMO3-219ENST00000538051 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
LMO3-219ENST00000538051 ATRNO75882 1429 aa16.47■□□□□ 0.23
LMO3-219ENST00000538051 RGPD5Q99666 1765 aa16.47■□□□□ 0.23
LMO3-219ENST00000538051 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
LMO3-219ENST00000538051 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
LMO3-219ENST00000538051 PLCH1Q4KWH8 1693 aa16.46■□□□□ 0.23
LMO3-219ENST00000538051 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
LMO3-219ENST00000538051 RUNDC1Q96C34 613 aa16.46■□□□□ 0.23
LMO3-219ENST00000538051 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
LMO3-219ENST00000538051 GJD4Q96KN9 370 aaPredicted RBP16.45■□□□□ 0.22
LMO3-219ENST00000538051 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.45■□□□□ 0.22
LMO3-219ENST00000538051 SLIT2O94813 1529 aa16.44■□□□□ 0.22
LMO3-219ENST00000538051 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
LMO3-219ENST00000538051 BCL9LQ86UU0 1499 aa16.43■□□□□ 0.22
LMO3-219ENST00000538051 NRAPQ86VF7 1730 aa16.43■□□□□ 0.22
LMO3-219ENST00000538051 CCDC125Q86Z20 511 aa16.43■□□□□ 0.22
LMO3-219ENST00000538051 EYA1Q99502 592 aa16.43■□□□□ 0.22
LMO3-219ENST00000538051 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
LMO3-219ENST00000538051 AXIN2Q9Y2T1 843 aa16.43■□□□□ 0.22
LMO3-219ENST00000538051 FAM83GA6ND36 823 aa16.42■□□□□ 0.22
LMO3-219ENST00000538051 CRB1P82279 1406 aa16.42■□□□□ 0.22
LMO3-219ENST00000538051 ZBTB7CA1YPR0 619 aa16.41■□□□□ 0.22
LMO3-219ENST00000538051 UNC5CLQ8IV45 518 aa16.41■□□□□ 0.22
LMO3-219ENST00000538051 PLEKHF1Q96S99 279 aa16.41■□□□□ 0.22
LMO3-219ENST00000538051 CARD10Q9BWT7 1032 aa16.41■□□□□ 0.22
LMO3-219ENST00000538051 ZBED9Q6R2W3 1325 aa16.41■□□□□ 0.22
LMO3-219ENST00000538051 CHRNA2Q15822 529 aa16.4■□□□□ 0.22
LMO3-219ENST00000538051 CCDC27Q2M243 656 aa16.4■□□□□ 0.22
LMO3-219ENST00000538051 SULT6B1Q6IMI4 303 aa16.4■□□□□ 0.22
LMO3-219ENST00000538051 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.4■□□□□ 0.22
LMO3-219ENST00000538051 CCDC9Q9Y3X0 531 aaKnown RBP16.4■□□□□ 0.22
LMO3-219ENST00000538051 PARP4Q9UKK3 1724 aaKnown RBP16.39■□□□□ 0.21
LMO3-219ENST00000538051 CSB-PGBD3P0DP91 1061 aa16.39■□□□□ 0.21
LMO3-219ENST00000538051 EVA1CP58658 441 aa16.39■□□□□ 0.21
LMO3-219ENST00000538051 BTG4Q9NY30 223 aa16.39■□□□□ 0.21
LMO3-219ENST00000538051 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
LMO3-219ENST00000538051 PRKAR2BP31323 418 aa16.38■□□□□ 0.21
LMO3-219ENST00000538051 LMOD3Q0VAK6 560 aa16.38■□□□□ 0.21
LMO3-219ENST00000538051 AMOTQ4VCS5 1084 aa16.38■□□□□ 0.21
LMO3-219ENST00000538051 NBPF6Q5VWK0 638 aa16.38■□□□□ 0.21
LMO3-219ENST00000538051 NBPF4Q96M43 638 aa16.38■□□□□ 0.21
LMO3-219ENST00000538051 CDCA7Q9BWT1 371 aaPredicted RBP16.38■□□□□ 0.21
LMO3-219ENST00000538051 THRAP3Q9Y2W1 955 aaKnown RBP16.38■□□□□ 0.21
LMO3-219ENST00000538051 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
LMO3-219ENST00000538051 SF3B2Q13435 895 aaKnown RBP16.37■□□□□ 0.21
LMO3-219ENST00000538051 GAS2L2Q8NHY3 880 aa16.37■□□□□ 0.21
LMO3-219ENST00000538051 LTV1Q96GA3 475 aaPredicted RBP16.37■□□□□ 0.21
LMO3-219ENST00000538051 PDE3BQ13370 1112 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms