RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 EIF4A2Q14240 407 aaKnown RBP16.37■□□□□ 0.21
DDB1-209ENST00000537877 ARHGEF25Q86VW2 580 aa16.37■□□□□ 0.21
DDB1-209ENST00000537877 NGEFQ8N5V2 710 aa16.37■□□□□ 0.21
DDB1-209ENST00000537877 RUNDC1Q96C34 613 aa16.37■□□□□ 0.21
DDB1-209ENST00000537877 COL16A1Q07092 1604 aaPredicted RBP16.36■□□□□ 0.21
DDB1-209ENST00000537877 HSP90AB2PQ58FF8 381 aa16.36■□□□□ 0.21
DDB1-209ENST00000537877 IP6K1Q92551 441 aa16.36■□□□□ 0.21
DDB1-209ENST00000537877 CPDO75976 1380 aa16.35■□□□□ 0.21
DDB1-209ENST00000537877 FCHSD2O94868 740 aa16.35■□□□□ 0.21
DDB1-209ENST00000537877 CERKQ8TCT0 537 aa16.35■□□□□ 0.21
DDB1-209ENST00000537877 UBAP1LF5GYI3 381 aa16.34■□□□□ 0.21
DDB1-209ENST00000537877 CCDC146Q8IYE0 955 aa16.34■□□□□ 0.21
DDB1-209ENST00000537877 LRRC59Q96AG4 307 aaKnown RBP16.34■□□□□ 0.21
DDB1-209ENST00000537877 RSPH6AQ9H0K4 717 aa16.33■□□□□ 0.2
DDB1-209ENST00000537877 COL18A1P39060 1754 aa16.33■□□□□ 0.2
DDB1-209ENST00000537877 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
DDB1-209ENST00000537877 MAPK8IP3Q9UPT6 1336 aa16.32■□□□□ 0.2
DDB1-209ENST00000537877 FAM208AQ9UK61 1670 aaKnown RBP16.32■□□□□ 0.2
DDB1-209ENST00000537877 CAMTA1Q9Y6Y1 1673 aa16.32■□□□□ 0.2
DDB1-209ENST00000537877 IGSF1Q8N6C5 1336 aa16.31■□□□□ 0.2
DDB1-209ENST00000537877 APAF1O14727 1248 aa16.31■□□□□ 0.2
DDB1-209ENST00000537877 PLEKHF1Q96S99 279 aa16.31■□□□□ 0.2
DDB1-209ENST00000537877 KDRP35968 1356 aa16.3■□□□□ 0.2
DDB1-209ENST00000537877 NEFMP07197 916 aa16.3■□□□□ 0.2
DDB1-209ENST00000537877 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
DDB1-209ENST00000537877 ZBTB7CA1YPR0 619 aa16.29■□□□□ 0.2
DDB1-209ENST00000537877 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
DDB1-209ENST00000537877 ZC3H6P61129 1189 aaKnown RBP16.29■□□□□ 0.2
DDB1-209ENST00000537877 PIP4K2BP78356 416 aa16.29■□□□□ 0.2
DDB1-209ENST00000537877 PDE3BQ13370 1112 aa16.29■□□□□ 0.2
DDB1-209ENST00000537877 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
DDB1-209ENST00000537877 LMO7Q8WWI1 1683 aa16.29■□□□□ 0.2
DDB1-209ENST00000537877 RGPD5Q99666 1765 aa16.29■□□□□ 0.2
DDB1-209ENST00000537877 KIAA0232Q92628 1395 aa16.29■□□□□ 0.2
DDB1-209ENST00000537877 HMOX1P09601 288 aa16.28■□□□□ 0.2
DDB1-209ENST00000537877 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
DDB1-209ENST00000537877 HAP1P54257 671 aaPredicted RBP16.28■□□□□ 0.2
DDB1-209ENST00000537877 NCAPD2Q15021 1401 aa16.28■□□□□ 0.2
DDB1-209ENST00000537877 ZNF521Q96K83 1311 aa16.28■□□□□ 0.2
DDB1-209ENST00000537877 EYA1Q99502 592 aa16.27■□□□□ 0.2
DDB1-209ENST00000537877 CCDC27Q2M243 656 aa16.26■□□□□ 0.19
DDB1-209ENST00000537877 SULT6B1Q6IMI4 303 aa16.26■□□□□ 0.19
DDB1-209ENST00000537877 ERBB3P21860 1342 aa16.26■□□□□ 0.19
DDB1-209ENST00000537877 SALL2Q9Y467 1007 aaPredicted RBP16.26■□□□□ 0.19
DDB1-209ENST00000537877 SENP3-EIF4A1A0A087X0R7 540 aa16.25■□□□□ 0.19
DDB1-209ENST00000537877 AEBP1Q8IUX7 1158 aa16.25■□□□□ 0.19
DDB1-209ENST00000537877 ANKRD24Q8TF21 1146 aa16.25■□□□□ 0.19
DDB1-209ENST00000537877 LTV1Q96GA3 475 aaPredicted RBP16.25■□□□□ 0.19
DDB1-209ENST00000537877 PRDM11Q9NQV5 511 aa16.25■□□□□ 0.19
DDB1-209ENST00000537877 RGPD2P0DJD1 1756 aa16.25■□□□□ 0.19
DDB1-209ENST00000537877 COL14A1Q05707 1796 aaKnown RBP16.24■□□□□ 0.19
DDB1-209ENST00000537877 TMPOP42166 694 aaKnown RBP16.24■□□□□ 0.19
DDB1-209ENST00000537877 AXIN2Q9Y2T1 843 aa16.24■□□□□ 0.19
DDB1-209ENST00000537877 NFE2L2Q16236 605 aa16.23■□□□□ 0.19
DDB1-209ENST00000537877 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
DDB1-209ENST00000537877 CHRNA2Q15822 529 aa16.21■□□□□ 0.19
DDB1-209ENST00000537877 WWC1Q8IX03 1113 aa16.21■□□□□ 0.19
DDB1-209ENST00000537877 PHACTR3Q96KR7 559 aa16.21■□□□□ 0.19
DDB1-209ENST00000537877 RRP7AQ9Y3A4 280 aaKnown RBP16.21■□□□□ 0.19
DDB1-209ENST00000537877 DLG5Q8TDM6 1919 aa16.21■□□□□ 0.19
DDB1-209ENST00000537877 PLEKHG2Q9H7P9 1386 aa16.21■□□□□ 0.19
DDB1-209ENST00000537877 COL5A2P05997 1499 aaPredicted RBP16.21■□□□□ 0.19
DDB1-209ENST00000537877 LMOD3Q0VAK6 560 aa16.2■□□□□ 0.18
DDB1-209ENST00000537877 NEUROD2Q15784 382 aa16.2■□□□□ 0.18
DDB1-209ENST00000537877 NBPF6Q5VWK0 638 aa16.2■□□□□ 0.18
DDB1-209ENST00000537877 WDR63Q8IWG1 891 aa16.2■□□□□ 0.18
DDB1-209ENST00000537877 NBPF4Q96M43 638 aa16.2■□□□□ 0.18
DDB1-209ENST00000537877 JCADQ9P266 1359 aa16.2■□□□□ 0.18
DDB1-209ENST00000537877 RIPK4P57078 832 aa16.19■□□□□ 0.18
DDB1-209ENST00000537877 PLCH1Q4KWH8 1693 aa16.18■□□□□ 0.18
DDB1-209ENST00000537877 WDR17Q8IZU2 1322 aa16.18■□□□□ 0.18
DDB1-209ENST00000537877 E9PSI1 815 aa16.17■□□□□ 0.18
DDB1-209ENST00000537877 USHBP1Q8N6Y0 703 aa16.17■□□□□ 0.18
DDB1-209ENST00000537877 GAS2L2Q8NHY3 880 aa16.17■□□□□ 0.18
DDB1-209ENST00000537877 TRIM35Q9UPQ4 493 aa16.17■□□□□ 0.18
DDB1-209ENST00000537877 IL16Q14005 1332 aa16.17■□□□□ 0.18
DDB1-209ENST00000537877 CSB-PGBD3P0DP91 1061 aa16.16■□□□□ 0.18
DDB1-209ENST00000537877 SLFN5Q08AF3 891 aa16.16■□□□□ 0.18
DDB1-209ENST00000537877 CDCA7LQ96GN5 454 aa16.15■□□□□ 0.18
DDB1-209ENST00000537877 NLRP2Q9NX02 1062 aa16.15■□□□□ 0.18
DDB1-209ENST00000537877 NWD2Q9ULI1 1742 aa16.15■□□□□ 0.18
DDB1-209ENST00000537877 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
DDB1-209ENST00000537877 CALD1Q05682 793 aaKnown RBP16.14■□□□□ 0.17
DDB1-209ENST00000537877 NRAPQ86VF7 1730 aa16.14■□□□□ 0.17
DDB1-209ENST00000537877 PARP4Q9UKK3 1724 aaKnown RBP16.14■□□□□ 0.17
DDB1-209ENST00000537877 LRRC37A3O60309 1634 aa16.14■□□□□ 0.17
DDB1-209ENST00000537877 TRMT2AQ8IZ69 625 aaKnown RBP16.13■□□□□ 0.17
DDB1-209ENST00000537877 SPATA31A6Q5VVP1 1343 aa16.13■□□□□ 0.17
DDB1-209ENST00000537877 PKD1L3Q7Z443 1732 aa16.13■□□□□ 0.17
DDB1-209ENST00000537877 MTHFSDQ2M296 383 aaKnown RBP16.13■□□□□ 0.17
DDB1-209ENST00000537877 AMOTQ4VCS5 1084 aa16.13■□□□□ 0.17
DDB1-209ENST00000537877 DUSP27Q5VZP5 1158 aa16.13■□□□□ 0.17
DDB1-209ENST00000537877 CRB1P82279 1406 aa16.12■□□□□ 0.17
DDB1-209ENST00000537877 HTATSF1O43719 755 aaKnown RBP16.12■□□□□ 0.17
DDB1-209ENST00000537877 RAPGEF4Q8WZA2 1011 aa16.12■□□□□ 0.17
DDB1-209ENST00000537877 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
DDB1-209ENST00000537877 MAP3K5Q99683 1374 aa16.11■□□□□ 0.17
DDB1-209ENST00000537877 MEGF6O75095 1541 aa16.11■□□□□ 0.17
DDB1-209ENST00000537877 PLEKHO1Q53GL0 409 aaPredicted RBP16.11■□□□□ 0.17
DDB1-209ENST00000537877 TOM1L2Q6ZVM7 507 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms