RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 CAMKK2Q96RR4 588 aa13.75□□□□□ -0.21
CHD4-207ENST00000537634 NFAT5O94916 1531 aa13.74□□□□□ -0.21
CHD4-207ENST00000537634 OVOS2A0A0G2JMS6 1433 aa13.74□□□□□ -0.21
CHD4-207ENST00000537634 OVOS2A0A0J9YW53 1432 aa13.74□□□□□ -0.21
CHD4-207ENST00000537634 OVOS2Q6IE36 1432 aa13.74□□□□□ -0.21
CHD4-207ENST00000537634 WDR17Q8IZU2 1322 aa13.74□□□□□ -0.21
CHD4-207ENST00000537634 C11orf95C9JLR9 678 aaPredicted RBP13.74□□□□□ -0.21
CHD4-207ENST00000537634 ARHGEF25Q86VW2 580 aa13.74□□□□□ -0.21
CHD4-207ENST00000537634 ABCC6O95255 1503 aa13.74□□□□□ -0.21
CHD4-207ENST00000537634 SRCAPQ6ZRS2 3230 aa13.73□□□□□ -0.21
CHD4-207ENST00000537634 NUP188Q5SRE5 1749 aa13.73□□□□□ -0.21
CHD4-207ENST00000537634 PEAK1Q9H792 1746 aa13.73□□□□□ -0.21
CHD4-207ENST00000537634 USP54Q70EL1 1684 aa13.73□□□□□ -0.21
CHD4-207ENST00000537634 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
CHD4-207ENST00000537634 CSB-PGBD3P0DP91 1061 aa13.72□□□□□ -0.21
CHD4-207ENST00000537634 DDB1Q16531 1140 aa13.72□□□□□ -0.21
CHD4-207ENST00000537634 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHD4-207ENST00000537634 TMC1Q8TDI8 760 aa13.72□□□□□ -0.21
CHD4-207ENST00000537634 HDGFL2Q7Z4V5 671 aaPredicted RBP13.71□□□□□ -0.21
CHD4-207ENST00000537634 CDCA7Q9BWT1 371 aaPredicted RBP13.71□□□□□ -0.21
CHD4-207ENST00000537634 CD163L1Q9NR16 1453 aa13.71□□□□□ -0.21
CHD4-207ENST00000537634 SBF2Q86WG5 1849 aa13.71□□□□□ -0.22
CHD4-207ENST00000537634 LTN1O94822 1766 aa13.71□□□□□ -0.22
CHD4-207ENST00000537634 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
CHD4-207ENST00000537634 RGPD3A6NKT7 1758 aaPredicted RBP13.7□□□□□ -0.22
CHD4-207ENST00000537634 RGPD4Q7Z3J3 1758 aa13.7□□□□□ -0.22
CHD4-207ENST00000537634 USP31Q70CQ4 1352 aa13.7□□□□□ -0.22
CHD4-207ENST00000537634 NBPF14Q5TI25 921 aa13.69□□□□□ -0.22
CHD4-207ENST00000537634 NME9Q86XW9 330 aa13.69□□□□□ -0.22
CHD4-207ENST00000537634 CARD10Q9BWT7 1032 aa13.69□□□□□ -0.22
CHD4-207ENST00000537634 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
CHD4-207ENST00000537634 CCDC7Q96M83 1385 aa13.69□□□□□ -0.22
CHD4-207ENST00000537634 SLC12A5Q9H2X9 1139 aa13.68□□□□□ -0.22
CHD4-207ENST00000537634 A0A1W2PP64 1363 aa13.68□□□□□ -0.22
CHD4-207ENST00000537634 PUS7Q96PZ0 661 aaKnown RBP13.67□□□□□ -0.22
CHD4-207ENST00000537634 TRIM26Q12899 539 aaPredicted RBP13.66□□□□□ -0.22
CHD4-207ENST00000537634 MARCH10Q8NA82 808 aaPredicted RBP13.66□□□□□ -0.22
CHD4-207ENST00000537634 NINLQ9Y2I6 1382 aa13.66□□□□□ -0.22
CHD4-207ENST00000537634 BCL9O00512 1426 aa13.65□□□□□ -0.22
CHD4-207ENST00000537634 TNS2Q63HR2 1409 aa13.65□□□□□ -0.22
CHD4-207ENST00000537634 BCL11BQ9C0K0 894 aaPredicted RBP13.65□□□□□ -0.22
CHD4-207ENST00000537634 ERBB3P21860 1342 aa13.64□□□□□ -0.23
CHD4-207ENST00000537634 ST20-MTHFSA0A0A6YYL1 179 aa13.64□□□□□ -0.23
CHD4-207ENST00000537634 EXOC5O00471 708 aa13.64□□□□□ -0.23
CHD4-207ENST00000537634 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
CHD4-207ENST00000537634 NLRP2Q9NX02 1062 aa13.64□□□□□ -0.23
CHD4-207ENST00000537634 PLSCR1O15162 318 aa13.63□□□□□ -0.23
CHD4-207ENST00000537634 TESK2Q96S53 571 aa13.63□□□□□ -0.23
CHD4-207ENST00000537634 ANKRD24Q8TF21 1146 aa13.62□□□□□ -0.23
CHD4-207ENST00000537634 FAM208AQ9UK61 1670 aaKnown RBP13.62□□□□□ -0.23
CHD4-207ENST00000537634 NHSQ6T4R5 1651 aa13.61□□□□□ -0.23
CHD4-207ENST00000537634 PTF1AQ7RTS3 328 aa13.61□□□□□ -0.23
CHD4-207ENST00000537634 IL2RBP14784 551 aa13.6□□□□□ -0.23
CHD4-207ENST00000537634 ANKRD36BQ8N2N9 1353 aa13.59□□□□□ -0.23
CHD4-207ENST00000537634 USP47Q96K76 1375 aa13.59□□□□□ -0.23
CHD4-207ENST00000537634 COG3Q96JB2 828 aa13.59□□□□□ -0.23
CHD4-207ENST00000537634 TMF1P82094 1093 aa13.58□□□□□ -0.24
CHD4-207ENST00000537634 IP6K1Q92551 441 aa13.58□□□□□ -0.24
CHD4-207ENST00000537634 SPON1Q9HCB6 807 aa13.58□□□□□ -0.24
CHD4-207ENST00000537634 ANO8Q9HCE9 1232 aaPredicted RBP13.58□□□□□ -0.24
CHD4-207ENST00000537634 CASZ1Q86V15 1759 aa13.58□□□□□ -0.24
CHD4-207ENST00000537634 KCNQ2O43526 872 aa13.57□□□□□ -0.24
CHD4-207ENST00000537634 PPP1R1BQ9UD71 204 aaPredicted RBP13.57□□□□□ -0.24
CHD4-207ENST00000537634 TXNRD1Q16881 649 aa13.56□□□□□ -0.24
CHD4-207ENST00000537634 PROM2Q8N271 834 aa13.56□□□□□ -0.24
CHD4-207ENST00000537634 LTV1Q96GA3 475 aaPredicted RBP13.56□□□□□ -0.24
CHD4-207ENST00000537634 ACSBG1Q96GR2 724 aa13.56□□□□□ -0.24
CHD4-207ENST00000537634 MAP3K19Q56UN5 1328 aa13.56□□□□□ -0.24
CHD4-207ENST00000537634 BTAF1O14981 1849 aa13.55□□□□□ -0.24
CHD4-207ENST00000537634 AMPHP49418 695 aa13.55□□□□□ -0.24
CHD4-207ENST00000537634 STK32BQ9NY57 414 aa13.55□□□□□ -0.24
CHD4-207ENST00000537634 KAT6BQ8WYB5 2073 aa13.55□□□□□ -0.24
CHD4-207ENST00000537634 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
CHD4-207ENST00000537634 CDCA8Q53HL2 280 aa13.54□□□□□ -0.24
CHD4-207ENST00000537634 RTL1A6NKG5 1358 aa13.54□□□□□ -0.24
CHD4-207ENST00000537634 HOXC9P31274 260 aa13.53□□□□□ -0.24
CHD4-207ENST00000537634 RGPD2P0DJD1 1756 aa13.53□□□□□ -0.24
CHD4-207ENST00000537634 MYOM1P52179 1685 aa13.52□□□□□ -0.25
CHD4-207ENST00000537634 PAPPAQ13219 1627 aa13.51□□□□□ -0.25
CHD4-207ENST00000537634 SMG6Q86US8 1419 aaKnown RBP13.51□□□□□ -0.25
CHD4-207ENST00000537634 FYB1O15117 783 aa13.51□□□□□ -0.25
CHD4-207ENST00000537634 FBLN1P23142 703 aa13.51□□□□□ -0.25
CHD4-207ENST00000537634 SLC15A2Q16348 729 aa13.51□□□□□ -0.25
CHD4-207ENST00000537634 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
CHD4-207ENST00000537634 PDGFDQ9GZP0 370 aaPredicted RBP13.51□□□□□ -0.25
CHD4-207ENST00000537634 GGNBP2Q9H3C7 697 aa13.51□□□□□ -0.25
CHD4-207ENST00000537634 DOT1LQ8TEK3 1739 aa13.5□□□□□ -0.25
CHD4-207ENST00000537634 ZBTB7AO95365 584 aa13.5□□□□□ -0.25
CHD4-207ENST00000537634 RRS1Q15050 365 aaKnown RBP13.5□□□□□ -0.25
CHD4-207ENST00000537634 TIMELESSQ9UNS1 1208 aa13.5□□□□□ -0.25
CHD4-207ENST00000537634 SHANK3Q9BYB0 1731 aa13.5□□□□□ -0.25
CHD4-207ENST00000537634 CLSPNQ9HAW4 1339 aa13.49□□□□□ -0.25
CHD4-207ENST00000537634 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
CHD4-207ENST00000537634 MEGF6O75095 1541 aa13.49□□□□□ -0.25
CHD4-207ENST00000537634 NSD3Q9BZ95 1437 aa13.47□□□□□ -0.25
CHD4-207ENST00000537634 ZCRB1Q8TBF4 217 aaKnown RBP13.47□□□□□ -0.25
CHD4-207ENST00000537634 SYTL4Q96C24 671 aaPredicted RBP13.47□□□□□ -0.25
CHD4-207ENST00000537634 PCGF6Q9BYE7 350 aa13.47□□□□□ -0.25
CHD4-207ENST00000537634 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
CHD4-207ENST00000537634 FLT4P35916 1363 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms