RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 LRRCC1Q9C099 1032 aa13.79□□□□□ -0.2
TNC-211ENST00000537320 TNRQ92752 1358 aa13.78□□□□□ -0.2
TNC-211ENST00000537320 PRAG1Q86YV5 1406 aa13.78□□□□□ -0.2
TNC-211ENST00000537320 TRIM29Q14134 588 aa13.78□□□□□ -0.2
TNC-211ENST00000537320 IFT57Q9NWB7 429 aa13.78□□□□□ -0.2
TNC-211ENST00000537320 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
TNC-211ENST00000537320 CHD1LQ86WJ1 897 aa13.78□□□□□ -0.2
TNC-211ENST00000537320 SIL1Q9H173 461 aa13.78□□□□□ -0.2
TNC-211ENST00000537320 RALYLQ86SE5 291 aaKnown RBP13.78□□□□□ -0.2
TNC-211ENST00000537320 ABCC11Q96J66 1382 aa13.77□□□□□ -0.2
TNC-211ENST00000537320 FBXW7Q969H0 707 aa13.77□□□□□ -0.2
TNC-211ENST00000537320 NSD2O96028 1365 aa13.77□□□□□ -0.21
TNC-211ENST00000537320 AMER1Q5JTC6 1135 aaPredicted RBP13.76□□□□□ -0.21
TNC-211ENST00000537320 VPS53Q5VIR6 699 aa13.76□□□□□ -0.21
TNC-211ENST00000537320 SRGAP3O43295 1099 aa13.76□□□□□ -0.21
TNC-211ENST00000537320 NEK4P51957 841 aa13.76□□□□□ -0.21
TNC-211ENST00000537320 NKTRP30414 1462 aaKnown RBP13.76□□□□□ -0.21
TNC-211ENST00000537320 RAD21O60216 631 aa13.76□□□□□ -0.21
TNC-211ENST00000537320 ACEP12821 1306 aa13.75□□□□□ -0.21
TNC-211ENST00000537320 FBLN1P23142 703 aa13.75□□□□□ -0.21
TNC-211ENST00000537320 CCDC27Q2M243 656 aa13.75□□□□□ -0.21
TNC-211ENST00000537320 ERICH2A1L162 156 aa13.75□□□□□ -0.21
TNC-211ENST00000537320 NFKBIBQ15653 356 aa13.75□□□□□ -0.21
TNC-211ENST00000537320 RPAP2Q8IXW5 612 aaPredicted RBP13.75□□□□□ -0.21
TNC-211ENST00000537320 FOSBP53539 338 aa13.75□□□□□ -0.21
TNC-211ENST00000537320 PSMA5P28066 241 aa13.74□□□□□ -0.21
TNC-211ENST00000537320 ABCC10Q5T3U5 1492 aa13.74□□□□□ -0.21
TNC-211ENST00000537320 TEX14Q8IWB6 1497 aa13.74□□□□□ -0.21
TNC-211ENST00000537320 BECN2A8MW95 431 aa13.74□□□□□ -0.21
TNC-211ENST00000537320 TAF7Q15545 349 aaPredicted RBP13.74□□□□□ -0.21
TNC-211ENST00000537320 BICD2Q8TD16 824 aa13.74□□□□□ -0.21
TNC-211ENST00000537320 FYB1O15117 783 aa13.74□□□□□ -0.21
TNC-211ENST00000537320 ALDH1L2Q3SY69 923 aa13.74□□□□□ -0.21
TNC-211ENST00000537320 CNNM1Q9NRU3 951 aa13.74□□□□□ -0.21
TNC-211ENST00000537320 GOLGA6L19H0YKK7 550 aa13.73□□□□□ -0.21
TNC-211ENST00000537320 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
TNC-211ENST00000537320 SHANK2Q9UPX8 1470 aa13.73□□□□□ -0.21
TNC-211ENST00000537320 PIP4K2BP78356 416 aa13.73□□□□□ -0.21
TNC-211ENST00000537320 IL1RAPL2Q9NP60 686 aa13.73□□□□□ -0.21
TNC-211ENST00000537320 TBC1D2BQ9UPU7 963 aa13.73□□□□□ -0.21
TNC-211ENST00000537320 UHRF1BP1LA0JNW5 1464 aa13.73□□□□□ -0.21
TNC-211ENST00000537320 HIP1O00291 1037 aa13.73□□□□□ -0.21
TNC-211ENST00000537320 RABEP1Q15276 862 aa13.73□□□□□ -0.21
TNC-211ENST00000537320 ABCA5Q8WWZ7 1642 aa13.73□□□□□ -0.21
TNC-211ENST00000537320 ABCC2Q92887 1545 aa13.72□□□□□ -0.21
TNC-211ENST00000537320 DHX16O60231 1041 aaKnown RBP13.72□□□□□ -0.21
TNC-211ENST00000537320 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
TNC-211ENST00000537320 MAP4K4O95819 1239 aaPredicted RBP13.72□□□□□ -0.21
TNC-211ENST00000537320 PBRM1Q86U86 1689 aa13.72□□□□□ -0.21
TNC-211ENST00000537320 AMOTQ4VCS5 1084 aa13.72□□□□□ -0.21
TNC-211ENST00000537320 MPRIPQ6WCQ1 1025 aa13.71□□□□□ -0.21
TNC-211ENST00000537320 TESK2Q96S53 571 aa13.71□□□□□ -0.21
TNC-211ENST00000537320 EXOC6BQ9Y2D4 811 aa13.71□□□□□ -0.21
TNC-211ENST00000537320 CCDC158Q5M9N0 1113 aa13.71□□□□□ -0.21
TNC-211ENST00000537320 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.71□□□□□ -0.22
TNC-211ENST00000537320 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.22
TNC-211ENST00000537320 AACSQ86V21 672 aa13.7□□□□□ -0.22
TNC-211ENST00000537320 TTC21BQ7Z4L5 1316 aa13.7□□□□□ -0.22
TNC-211ENST00000537320 TTC39AQ5SRH9 613 aa13.7□□□□□ -0.22
TNC-211ENST00000537320 TPD52L1Q16890 204 aaPredicted RBP13.7□□□□□ -0.22
TNC-211ENST00000537320 CCDC57Q2TAC2 916 aa13.7□□□□□ -0.22
TNC-211ENST00000537320 KRT28Q7Z3Y7 464 aa13.7□□□□□ -0.22
TNC-211ENST00000537320 SKAP1Q86WV1 359 aa13.7□□□□□ -0.22
TNC-211ENST00000537320 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.69□□□□□ -0.22
TNC-211ENST00000537320 PES1O00541 588 aaKnown RBP13.69□□□□□ -0.22
TNC-211ENST00000537320 RIMS2Q9UQ26 1411 aa13.69□□□□□ -0.22
TNC-211ENST00000537320 F6X3S4 739 aa13.69□□□□□ -0.22
TNC-211ENST00000537320 LRPPRCP42704 1394 aaKnown RBP13.69□□□□□ -0.22
TNC-211ENST00000537320 FAM83GA6ND36 823 aa13.69□□□□□ -0.22
TNC-211ENST00000537320 TRIM27P14373 513 aa13.69□□□□□ -0.22
TNC-211ENST00000537320 MCM2P49736 904 aa13.69□□□□□ -0.22
TNC-211ENST00000537320 DNMT1P26358 1616 aaKnown RBP13.69□□□□□ -0.22
TNC-211ENST00000537320 PZPP20742 1482 aa13.69□□□□□ -0.22
TNC-211ENST00000537320 SAFBQ15424 915 aaKnown RBP eCLIP13.68□□□□□ -0.22
TNC-211ENST00000537320 ASXL1Q8IXJ9 1541 aa13.68□□□□□ -0.22
TNC-211ENST00000537320 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.68□□□□□ -0.22
TNC-211ENST00000537320 HSP90AB2PQ58FF8 381 aa13.67□□□□□ -0.22
TNC-211ENST00000537320 CCDC85AQ96PX6 553 aaPredicted RBP13.66□□□□□ -0.22
TNC-211ENST00000537320 MPHOSPH8Q99549 860 aa13.66□□□□□ -0.22
TNC-211ENST00000537320 CEP126Q9P2H0 1117 aa13.66□□□□□ -0.22
TNC-211ENST00000537320 NUTM1Q86Y26 1132 aa13.66□□□□□ -0.22
TNC-211ENST00000537320 MBIPQ9NS73 344 aa13.66□□□□□ -0.22
TNC-211ENST00000537320 PARD3Q8TEW0 1356 aa13.66□□□□□ -0.22
TNC-211ENST00000537320 CCDC73Q6ZRK6 1079 aa13.66□□□□□ -0.22
TNC-211ENST00000537320 STARD3NLO95772 234 aa13.65□□□□□ -0.22
TNC-211ENST00000537320 HMGB2P26583 209 aaKnown RBP13.65□□□□□ -0.22
TNC-211ENST00000537320 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
TNC-211ENST00000537320 PPIP5K1Q6PFW1 1433 aa13.65□□□□□ -0.22
TNC-211ENST00000537320 SMARCA5O60264 1052 aaPredicted RBP13.65□□□□□ -0.22
TNC-211ENST00000537320 LARP1Q6PKG0 1096 aaKnown RBP13.65□□□□□ -0.22
TNC-211ENST00000537320 TMOD3Q9NYL9 352 aa13.65□□□□□ -0.22
TNC-211ENST00000537320 SAMD9Q5K651 1589 aa13.65□□□□□ -0.22
TNC-211ENST00000537320 KDM4AO75164 1064 aa13.65□□□□□ -0.22
TNC-211ENST00000537320 FKBP4Q02790 459 aaKnown RBP eCLIP13.65□□□□□ -0.22
TNC-211ENST00000537320 CYP46A1Q9Y6A2 500 aa13.65□□□□□ -0.22
TNC-211ENST00000537320 SART3Q15020 963 aaKnown RBP13.64□□□□□ -0.23
TNC-211ENST00000537320 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
TNC-211ENST00000537320 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.64□□□□□ -0.23
TNC-211ENST00000537320 GNL3LQ9NVN8 582 aaKnown RBP13.64□□□□□ -0.23
TNC-211ENST00000537320 MTMR7Q9Y216 660 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms