RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 BRICD5Q6PL45 260 aa11.57□□□□□ -0.56
CCDC60-203ENST00000536742 BIVM-ERCC5R4GMW8 1640 aa11.57□□□□□ -0.56
CCDC60-203ENST00000536742 SPRYD7Q5W111 196 aa11.56□□□□□ -0.56
CCDC60-203ENST00000536742 FLIIQ13045 1269 aa11.55□□□□□ -0.56
CCDC60-203ENST00000536742 ZNF598Q86UK7 904 aaKnown RBP11.55□□□□□ -0.56
CCDC60-203ENST00000536742 FAM160A2Q8N612 972 aaPredicted RBP11.55□□□□□ -0.56
CCDC60-203ENST00000536742 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
CCDC60-203ENST00000536742 PCDHGC3Q9UN70 934 aa11.55□□□□□ -0.56
CCDC60-203ENST00000536742 PCDHB15Q9Y5E8 787 aa11.55□□□□□ -0.56
CCDC60-203ENST00000536742 DISP1Q96F81 1524 aa11.55□□□□□ -0.56
CCDC60-203ENST00000536742 ARHGEF12Q9NZN5 1544 aa11.55□□□□□ -0.56
CCDC60-203ENST00000536742 SRCAPQ6ZRS2 3230 aa11.54□□□□□ -0.56
CCDC60-203ENST00000536742 NUTM2BA6NNL0 878 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-203ENST00000536742 NUTM2EB1AL46 878 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-203ENST00000536742 NUTM2DQ5VT03 806 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-203ENST00000536742 POTEAQ6S8J7 498 aa11.54□□□□□ -0.56
CCDC60-203ENST00000536742 LIAT1Q6ZQX7 453 aa11.54□□□□□ -0.56
CCDC60-203ENST00000536742 NUTM2AQ8IVF1 878 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-203ENST00000536742 IQGAP2Q13576 1575 aa11.54□□□□□ -0.56
CCDC60-203ENST00000536742 KIAA0556O60303 1618 aa11.53□□□□□ -0.56
CCDC60-203ENST00000536742 HRCP23327 699 aa11.53□□□□□ -0.56
CCDC60-203ENST00000536742 RFC5P40937 340 aa11.53□□□□□ -0.56
CCDC60-203ENST00000536742 RNF19BQ6ZMZ0 732 aa11.53□□□□□ -0.56
CCDC60-203ENST00000536742 EMID1Q96A84 441 aaPredicted RBP11.53□□□□□ -0.56
CCDC60-203ENST00000536742 C6orf229H3BNL8 230 aa11.52□□□□□ -0.57
CCDC60-203ENST00000536742 CSPP1Q1MSJ5 1256 aa11.52□□□□□ -0.57
CCDC60-203ENST00000536742 MSS51Q4VC12 460 aa11.52□□□□□ -0.57
CCDC60-203ENST00000536742 ZNF697Q5TEC3 545 aa11.52□□□□□ -0.57
CCDC60-203ENST00000536742 RETREG3Q86VR2 466 aa11.52□□□□□ -0.57
CCDC60-203ENST00000536742 HLA-CQ95604 372 aa11.52□□□□□ -0.57
CCDC60-203ENST00000536742 FCF1Q9Y324 198 aaKnown RBP11.52□□□□□ -0.57
CCDC60-203ENST00000536742 DENND4BO75064 1496 aaPredicted RBP11.51□□□□□ -0.57
CCDC60-203ENST00000536742 EFCAB5A4FU69 1503 aa11.51□□□□□ -0.57
CCDC60-203ENST00000536742 ABCA9Q8IUA7 1624 aa11.51□□□□□ -0.57
CCDC60-203ENST00000536742 GUCA2AQ02747 115 aa11.51□□□□□ -0.57
CCDC60-203ENST00000536742 QPCTQ16769 361 aa11.51□□□□□ -0.57
CCDC60-203ENST00000536742 SIGLEC1Q9BZZ2 1709 aa11.51□□□□□ -0.57
CCDC60-203ENST00000536742 FHOD3Q2V2M9 1422 aa11.51□□□□□ -0.57
CCDC60-203ENST00000536742 PLA2G2CQ5R387 149 aa11.5□□□□□ -0.57
CCDC60-203ENST00000536742 DESI1Q6ICB0 168 aa11.5□□□□□ -0.57
CCDC60-203ENST00000536742 TRAF7Q6Q0C0 670 aa11.5□□□□□ -0.57
CCDC60-203ENST00000536742 USB1Q9BQ65 265 aaKnown RBP11.5□□□□□ -0.57
CCDC60-203ENST00000536742 PTPRKQ15262 1439 aa11.5□□□□□ -0.57
CCDC60-203ENST00000536742 MAGI2Q86UL8 1455 aa11.5□□□□□ -0.57
CCDC60-203ENST00000536742 ZFYVE16Q7Z3T8 1539 aa11.5□□□□□ -0.57
CCDC60-203ENST00000536742 RICTORQ6R327 1708 aa11.49□□□□□ -0.57
CCDC60-203ENST00000536742 CD2BP2O95400 341 aaKnown RBP11.49□□□□□ -0.57
CCDC60-203ENST00000536742 HELBQ8NG08 1087 aaPredicted RBP11.49□□□□□ -0.57
CCDC60-203ENST00000536742 PRDM9Q9NQV7 894 aa11.49□□□□□ -0.57
CCDC60-203ENST00000536742 ZBTB24O43167 697 aaPredicted RBP11.48□□□□□ -0.57
CCDC60-203ENST00000536742 RPIAP49247 311 aa11.48□□□□□ -0.57
CCDC60-203ENST00000536742 CABLES1Q8TDN4 633 aa11.48□□□□□ -0.57
CCDC60-203ENST00000536742 SETD1AO15047 1707 aaKnown RBP11.48□□□□□ -0.57
CCDC60-203ENST00000536742 CAMSAP1Q5T5Y3 1602 aa11.47□□□□□ -0.57
CCDC60-203ENST00000536742 APBB1O00213 710 aa11.47□□□□□ -0.57
CCDC60-203ENST00000536742 ZMYM4Q5VZL5 1548 aa11.46□□□□□ -0.57
CCDC60-203ENST00000536742 TRAPPC8Q9Y2L5 1435 aa11.46□□□□□ -0.57
CCDC60-203ENST00000536742 IGF1RP08069 1367 aa11.46□□□□□ -0.57
CCDC60-203ENST00000536742 RTL5Q5HYW3 569 aaPredicted RBP11.46□□□□□ -0.57
CCDC60-203ENST00000536742 CPS1P31327 1500 aa11.45□□□□□ -0.58
CCDC60-203ENST00000536742 PRR7Q8TB68 274 aa11.45□□□□□ -0.58
CCDC60-203ENST00000536742 PRR20EP86478 221 aa11.44□□□□□ -0.58
CCDC60-203ENST00000536742 PRR20CP86479 221 aa11.44□□□□□ -0.58
CCDC60-203ENST00000536742 PRR20DP86480 221 aa11.44□□□□□ -0.58
CCDC60-203ENST00000536742 PRR20BP86481 221 aa11.44□□□□□ -0.58
CCDC60-203ENST00000536742 PRR20AP86496 221 aa11.44□□□□□ -0.58
CCDC60-203ENST00000536742 TRIM67Q6ZTA4 783 aa11.44□□□□□ -0.58
CCDC60-203ENST00000536742 TNFRSF10AO00220 468 aa11.43□□□□□ -0.58
CCDC60-203ENST00000536742 FOXC1Q12948 553 aa11.43□□□□□ -0.58
CCDC60-203ENST00000536742 UGGT2Q9NYU1 1516 aa11.43□□□□□ -0.58
CCDC60-203ENST00000536742 MMP16P51512 607 aa11.42□□□□□ -0.58
CCDC60-203ENST00000536742 PKDCCQ504Y2 493 aa11.42□□□□□ -0.58
CCDC60-203ENST00000536742 CFAP99D6REC4 459 aa11.41□□□□□ -0.58
CCDC60-203ENST00000536742 AP1G2O75843 785 aa11.41□□□□□ -0.58
CCDC60-203ENST00000536742 MCM6Q14566 821 aa11.41□□□□□ -0.58
CCDC60-203ENST00000536742 FBXO31Q5XUX0 539 aaPredicted RBP11.41□□□□□ -0.58
CCDC60-203ENST00000536742 SYMPKQ92797 1274 aaKnown RBP11.41□□□□□ -0.58
CCDC60-203ENST00000536742 ABCA8O94911 1581 aa11.41□□□□□ -0.58
CCDC60-203ENST00000536742 C3P01024 1663 aa11.4□□□□□ -0.58
CCDC60-203ENST00000536742 ATP10AO60312 1499 aa11.4□□□□□ -0.58
CCDC60-203ENST00000536742 GDF9O60383 454 aa11.4□□□□□ -0.58
CCDC60-203ENST00000536742 DXOO77932 396 aaKnown RBP11.4□□□□□ -0.58
CCDC60-203ENST00000536742 PLA2R1Q13018 1463 aa11.39□□□□□ -0.59
CCDC60-203ENST00000536742 USP17L8P0C7I0 530 aa11.39□□□□□ -0.59
CCDC60-203ENST00000536742 C9orf84Q5VXU9 1444 aa11.39□□□□□ -0.59
CCDC60-203ENST00000536742 CCDC24Q8N4L8 307 aa11.39□□□□□ -0.59
CCDC60-203ENST00000536742 ESF1Q9H501 851 aaKnown RBP11.39□□□□□ -0.59
CCDC60-203ENST00000536742 PRM3Q9NNZ6 103 aa11.39□□□□□ -0.59
CCDC60-203ENST00000536742 DGAT1O75907 488 aa11.38□□□□□ -0.59
CCDC60-203ENST00000536742 JUNDP17535 347 aa11.38□□□□□ -0.59
CCDC60-203ENST00000536742 C14orf37Q86TY3 774 aa11.38□□□□□ -0.59
CCDC60-203ENST00000536742 CARMIL1Q5VZK9 1371 aa11.38□□□□□ -0.59
CCDC60-203ENST00000536742 LYPD8Q6UX82 237 aa11.37□□□□□ -0.59
CCDC60-203ENST00000536742 CFAP74Q9C0B2 1584 aa11.37□□□□□ -0.59
CCDC60-203ENST00000536742 ALKQ9UM73 1620 aa11.36□□□□□ -0.59
CCDC60-203ENST00000536742 FAM187AA6NFU0 413 aa11.36□□□□□ -0.59
CCDC60-203ENST00000536742 PTPRNQ16849 979 aa11.36□□□□□ -0.59
CCDC60-203ENST00000536742 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
CCDC60-203ENST00000536742 LCE2BO14633 110 aa11.35□□□□□ -0.59
CCDC60-203ENST00000536742 CTDSPL2Q05D32 466 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms