RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SOS2Q07890 1332 aaPredicted RBP17.07■□□□□ 0.32
CDK5RAP3-202ENST00000536708 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
CDK5RAP3-202ENST00000536708 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
CDK5RAP3-202ENST00000536708 CABLES1Q8TDN4 633 aa17.06■□□□□ 0.32
CDK5RAP3-202ENST00000536708 B4GALNT3Q6L9W6 998 aa17.06■□□□□ 0.32
CDK5RAP3-202ENST00000536708 COL16A1Q07092 1604 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-202ENST00000536708 HSP90AB2PQ58FF8 381 aa17.05■□□□□ 0.32
CDK5RAP3-202ENST00000536708 FLT4P35916 1363 aa17.05■□□□□ 0.32
CDK5RAP3-202ENST00000536708 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
CDK5RAP3-202ENST00000536708 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-202ENST00000536708 DIAPH1O60610 1272 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-202ENST00000536708 PIP4K2BP78356 416 aa17.04■□□□□ 0.32
CDK5RAP3-202ENST00000536708 GCP02774 474 aa17.03■□□□□ 0.32
CDK5RAP3-202ENST00000536708 U2AF1L5P0DN76 240 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-202ENST00000536708 U2AF1Q01081 240 aaKnown RBP eCLIP17.03■□□□□ 0.326e-9■■■□□ 17
CDK5RAP3-202ENST00000536708 IQSEC2Q5JU85 1478 aa17.03■□□□□ 0.32
CDK5RAP3-202ENST00000536708 ARHGEF10O15013 1369 aa17.02■□□□□ 0.32
CDK5RAP3-202ENST00000536708 SALL2Q9Y467 1007 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-202ENST00000536708 COL18A1P39060 1754 aa17.01■□□□□ 0.31
CDK5RAP3-202ENST00000536708 IL13P35225 146 aa17.01■□□□□ 0.31
CDK5RAP3-202ENST00000536708 AMPHP49418 695 aa17.01■□□□□ 0.31
CDK5RAP3-202ENST00000536708 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-202ENST00000536708 HOXC9P31274 260 aa17■□□□□ 0.31
CDK5RAP3-202ENST00000536708 UBAP1LF5GYI3 381 aa17■□□□□ 0.31
CDK5RAP3-202ENST00000536708 KCNH5Q8NCM2 988 aa17■□□□□ 0.31
CDK5RAP3-202ENST00000536708 RTL1A6NKG5 1358 aa16.99■□□□□ 0.31
CDK5RAP3-202ENST00000536708 HMOX1P09601 288 aa16.99■□□□□ 0.31
CDK5RAP3-202ENST00000536708 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-202ENST00000536708 COL22A1Q8NFW1 1626 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-202ENST00000536708 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
CDK5RAP3-202ENST00000536708 TOM1O60784 492 aa16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 ARHGEF25Q86VW2 580 aa16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 CERKQ8TCT0 537 aa16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 LTV1Q96GA3 475 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 APAF1O14727 1248 aa16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 AEBP1Q8IUX7 1158 aa16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
CDK5RAP3-202ENST00000536708 KIAA0232Q92628 1395 aa16.96■□□□□ 0.31
CDK5RAP3-202ENST00000536708 LMO7Q8WWI1 1683 aa16.95■□□□□ 0.3
CDK5RAP3-202ENST00000536708 RRP1P56182 461 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-202ENST00000536708 RRP7AQ9Y3A4 280 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-202ENST00000536708 RSPH6AQ9H0K4 717 aa16.95■□□□□ 0.3
CDK5RAP3-202ENST00000536708 AXIN2Q9Y2T1 843 aa16.95■□□□□ 0.3
CDK5RAP3-202ENST00000536708 CAMTA1Q9Y6Y1 1673 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 CHRNA2Q15822 529 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 ERICH6Q7L0X2 663 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 CCDC136Q96JN2 1154 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 PLEKHF1Q96S99 279 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 RCAN3Q9UKA8 241 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
CDK5RAP3-202ENST00000536708 IP6K1Q92551 441 aa16.93■□□□□ 0.3
CDK5RAP3-202ENST00000536708 RUNDC1Q96C34 613 aa16.93■□□□□ 0.3
CDK5RAP3-202ENST00000536708 TCP11L2Q8N4U5 519 aa16.92■□□□□ 0.3
CDK5RAP3-202ENST00000536708 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 USHBP1Q8N6Y0 703 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 ABCC6O95255 1503 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 IGSF1Q8N6C5 1336 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 FAM208AQ9UK61 1670 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 SULT6B1Q6IMI4 303 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 LRRC59Q96AG4 307 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 EYA1Q99502 592 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 CPDO75976 1380 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-202ENST00000536708 PHACTR3Q96KR7 559 aa16.9■□□□□ 0.3
CDK5RAP3-202ENST00000536708 MAPK8IP3Q9UPT6 1336 aa16.89■□□□□ 0.29
CDK5RAP3-202ENST00000536708 PLCH1Q4KWH8 1693 aa16.89■□□□□ 0.29
CDK5RAP3-202ENST00000536708 KDRP35968 1356 aa16.89■□□□□ 0.29
CDK5RAP3-202ENST00000536708 FCHSD2O94868 740 aa16.88■□□□□ 0.29
CDK5RAP3-202ENST00000536708 ANKRD24Q8TF21 1146 aa16.88■□□□□ 0.29
CDK5RAP3-202ENST00000536708 ERBB3P21860 1342 aa16.88■□□□□ 0.29
CDK5RAP3-202ENST00000536708 CDCA7LQ96GN5 454 aa16.88■□□□□ 0.29
CDK5RAP3-202ENST00000536708 PRDM11Q9NQV5 511 aa16.88■□□□□ 0.29
CDK5RAP3-202ENST00000536708 ZNF521Q96K83 1311 aa16.87■□□□□ 0.29
CDK5RAP3-202ENST00000536708 NBPF6Q5VWK0 638 aa16.87■□□□□ 0.29
CDK5RAP3-202ENST00000536708 NBPF4Q96M43 638 aa16.87■□□□□ 0.29
CDK5RAP3-202ENST00000536708 COL14A1Q05707 1796 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-202ENST00000536708 COL5A2P05997 1499 aaPredicted RBP16.85■□□□□ 0.29
CDK5RAP3-202ENST00000536708 VIRMAQ69YN4 1812 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-202ENST00000536708 NCAPD2Q15021 1401 aa16.84■□□□□ 0.29
CDK5RAP3-202ENST00000536708 TMPOP42166 694 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-202ENST00000536708 WWC1Q8IX03 1113 aa16.83■□□□□ 0.28
CDK5RAP3-202ENST00000536708 EXOC6Q8TAG9 804 aa16.83■□□□□ 0.28
CDK5RAP3-202ENST00000536708 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
CDK5RAP3-202ENST00000536708 FAM83GA6ND36 823 aa16.82■□□□□ 0.28
CDK5RAP3-202ENST00000536708 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-202ENST00000536708 TRIM35Q9UPQ4 493 aa16.81■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NUTM2BA6NNL0 878 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NUTM2EB1AL46 878 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 RIPK4P57078 832 aa16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NUTM2AQ8IVF1 878 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 ADAMTS2O95450 1211 aa16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NLRP2Q9NX02 1062 aa16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 MEGF6O75095 1541 aa16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NEFMP07197 916 aa16.79■□□□□ 0.28
CDK5RAP3-202ENST00000536708 CSB-PGBD3P0DP91 1061 aa16.79■□□□□ 0.28
CDK5RAP3-202ENST00000536708 THUMPD2Q9BTF0 503 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-202ENST00000536708 LRP6O75581 1613 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms