RNA–Protein interactions for RNA: ENST00000536297.1

CLPB-207, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-207ENST00000536297 PPP1R1BQ9UD71 204 aaPredicted RBP12.11□□□□□ -0.47
CLPB-207ENST00000536297 EVC2Q86UK5 1308 aa12.11□□□□□ -0.47
CLPB-207ENST00000536297 ZEB1P37275 1124 aaPredicted RBP12.1□□□□□ -0.47
CLPB-207ENST00000536297 TRPM1Q7Z4N2 1603 aa12.1□□□□□ -0.47
CLPB-207ENST00000536297 CPSF1Q10570 1443 aaKnown RBP12.1□□□□□ -0.47
CLPB-207ENST00000536297 WDR17Q8IZU2 1322 aa12.1□□□□□ -0.47
CLPB-207ENST00000536297 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
CLPB-207ENST00000536297 KCNQ2O43526 872 aa12.09□□□□□ -0.47
CLPB-207ENST00000536297 MARCH10Q8NA82 808 aaPredicted RBP12.09□□□□□ -0.47
CLPB-207ENST00000536297 ANO8Q9HCE9 1232 aaPredicted RBP12.09□□□□□ -0.47
CLPB-207ENST00000536297 RGPD3A6NKT7 1758 aaPredicted RBP12.09□□□□□ -0.47
CLPB-207ENST00000536297 AKAP12Q02952 1782 aa12.09□□□□□ -0.47
CLPB-207ENST00000536297 RGPD4Q7Z3J3 1758 aa12.09□□□□□ -0.47
CLPB-207ENST00000536297 TTC21BQ7Z4L5 1316 aa12.09□□□□□ -0.47
CLPB-207ENST00000536297 PLSCR1O15162 318 aa12.08□□□□□ -0.48
CLPB-207ENST00000536297 CSB-PGBD3P0DP91 1061 aa12.08□□□□□ -0.48
CLPB-207ENST00000536297 YY1P25490 414 aa12.08□□□□□ -0.48
CLPB-207ENST00000536297 SIN3AQ96ST3 1273 aa12.08□□□□□ -0.48
CLPB-207ENST00000536297 NEUROD1Q13562 356 aa12.07□□□□□ -0.48
CLPB-207ENST00000536297 ARHGEF25Q86VW2 580 aa12.07□□□□□ -0.48
CLPB-207ENST00000536297 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
CLPB-207ENST00000536297 PDGFDQ9GZP0 370 aaPredicted RBP12.07□□□□□ -0.48
CLPB-207ENST00000536297 ROCK2O75116 1388 aaKnown RBP12.06□□□□□ -0.48
CLPB-207ENST00000536297 CASZ1Q86V15 1759 aa12.06□□□□□ -0.48
CLPB-207ENST00000536297 PROM2Q8N271 834 aa12.06□□□□□ -0.48
CLPB-207ENST00000536297 KCNH5Q8NCM2 988 aa12.06□□□□□ -0.48
CLPB-207ENST00000536297 ZNF692Q9BU19 519 aaPredicted RBP12.06□□□□□ -0.48
CLPB-207ENST00000536297 CDCA7Q9BWT1 371 aaPredicted RBP12.05□□□□□ -0.48
CLPB-207ENST00000536297 CARD10Q9BWT7 1032 aa12.05□□□□□ -0.48
CLPB-207ENST00000536297 NFAT5O94916 1531 aa12.05□□□□□ -0.48
CLPB-207ENST00000536297 TTC21AQ8NDW8 1320 aa12.05□□□□□ -0.48
CLPB-207ENST00000536297 KTN1Q86UP2 1357 aaKnown RBP12.05□□□□□ -0.48
CLPB-207ENST00000536297 NINLQ9Y2I6 1382 aa12.05□□□□□ -0.48
CLPB-207ENST00000536297 EXOC5O00471 708 aa12.04□□□□□ -0.48
CLPB-207ENST00000536297 ZBTB7AO95365 584 aa12.04□□□□□ -0.48
CLPB-207ENST00000536297 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
CLPB-207ENST00000536297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLPB-207ENST00000536297 MON2Q7Z3U7 1717 aa12.03□□□□□ -0.48
CLPB-207ENST00000536297 TXNRD1Q16881 649 aa12.02□□□□□ -0.49
CLPB-207ENST00000536297 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
CLPB-207ENST00000536297 MYOM1P52179 1685 aa12.02□□□□□ -0.49
CLPB-207ENST00000536297 BCL9O00512 1426 aa12.02□□□□□ -0.49
CLPB-207ENST00000536297 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
CLPB-207ENST00000536297 STK32BQ9NY57 414 aa12.01□□□□□ -0.49
CLPB-207ENST00000536297 CCDC7Q96M83 1385 aa12.01□□□□□ -0.49
CLPB-207ENST00000536297 LTN1O94822 1766 aa12□□□□□ -0.49
CLPB-207ENST00000536297 NME9Q86XW9 330 aa12□□□□□ -0.49
CLPB-207ENST00000536297 TMC1Q8TDI8 760 aa12□□□□□ -0.49
CLPB-207ENST00000536297 NLRP2Q9NX02 1062 aa12□□□□□ -0.49
CLPB-207ENST00000536297 TNS2Q63HR2 1409 aa12□□□□□ -0.49
CLPB-207ENST00000536297 NHSQ6T4R5 1651 aa12□□□□□ -0.49
CLPB-207ENST00000536297 PTGER2P43116 358 aa11.99□□□□□ -0.49
CLPB-207ENST00000536297 SLC15A2Q16348 729 aa11.99□□□□□ -0.49
CLPB-207ENST00000536297 ABCC6O95255 1503 aa11.99□□□□□ -0.49
CLPB-207ENST00000536297 CD163L1Q9NR16 1453 aa11.98□□□□□ -0.49
CLPB-207ENST00000536297 ERBB3P21860 1342 aa11.98□□□□□ -0.49
CLPB-207ENST00000536297 USP54Q70EL1 1684 aa11.97□□□□□ -0.49
CLPB-207ENST00000536297 USP31Q70CQ4 1352 aa11.97□□□□□ -0.49
CLPB-207ENST00000536297 SBNO2Q9Y2G9 1366 aa11.97□□□□□ -0.49
CLPB-207ENST00000536297 ANKRD24Q8TF21 1146 aa11.97□□□□□ -0.49
CLPB-207ENST00000536297 CARD11Q9BXL7 1154 aa11.97□□□□□ -0.49
CLPB-207ENST00000536297 SLC12A5Q9H2X9 1139 aa11.97□□□□□ -0.49
CLPB-207ENST00000536297 BTAF1O14981 1849 aa11.96□□□□□ -0.49
CLPB-207ENST00000536297 IL2RBP14784 551 aa11.96□□□□□ -0.49
CLPB-207ENST00000536297 FHDC1Q9C0D6 1143 aaPredicted RBP11.96□□□□□ -0.49
CLPB-207ENST00000536297 HDGFL2Q7Z4V5 671 aaPredicted RBP11.95□□□□□ -0.5
CLPB-207ENST00000536297 MTFR1LQ9H019 292 aa11.95□□□□□ -0.5
CLPB-207ENST00000536297 PAPPAQ13219 1627 aa11.94□□□□□ -0.5
CLPB-207ENST00000536297 LTV1Q96GA3 475 aaPredicted RBP11.94□□□□□ -0.5
CLPB-207ENST00000536297 SYT17Q9BSW7 474 aa11.94□□□□□ -0.5
CLPB-207ENST00000536297 KAT6BQ8WYB5 2073 aa11.94□□□□□ -0.5
CLPB-207ENST00000536297 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
CLPB-207ENST00000536297 CLSPNQ9HAW4 1339 aa11.93□□□□□ -0.5
CLPB-207ENST00000536297 ZNF827Q17R98 1081 aa11.93□□□□□ -0.5
CLPB-207ENST00000536297 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
CLPB-207ENST00000536297 SGIP1Q9BQI5 828 aa11.93□□□□□ -0.5
CLPB-207ENST00000536297 A0A1W2PP64 1363 aa11.92□□□□□ -0.5
CLPB-207ENST00000536297 ARXQ96QS3 562 aa11.92□□□□□ -0.5
CLPB-207ENST00000536297 LRRC4BQ9NT99 713 aa11.92□□□□□ -0.5
CLPB-207ENST00000536297 TERF2IPQ9NYB0 399 aa11.92□□□□□ -0.5
CLPB-207ENST00000536297 ZNF784Q8NCA9 323 aaPredicted RBP11.91□□□□□ -0.5
CLPB-207ENST00000536297 FBLN1P23142 703 aa11.9□□□□□ -0.5
CLPB-207ENST00000536297 KCNQ4P56696 695 aa11.9□□□□□ -0.5
CLPB-207ENST00000536297 IP6K1Q92551 441 aa11.9□□□□□ -0.5
CLPB-207ENST00000536297 KLHL34Q8N239 644 aa11.89□□□□□ -0.51
CLPB-207ENST00000536297 SYTL4Q96C24 671 aaPredicted RBP11.89□□□□□ -0.51
CLPB-207ENST00000536297 FAM208AQ9UK61 1670 aaKnown RBP11.89□□□□□ -0.51
CLPB-207ENST00000536297 RGPD2P0DJD1 1756 aa11.89□□□□□ -0.51
CLPB-207ENST00000536297 TONSLQ96HA7 1378 aa11.89□□□□□ -0.51
CLPB-207ENST00000536297 DOT1LQ8TEK3 1739 aa11.89□□□□□ -0.51
CLPB-207ENST00000536297 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
CLPB-207ENST00000536297 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
CLPB-207ENST00000536297 CHD4Q14839 1912 aa11.88□□□□□ -0.51
CLPB-207ENST00000536297 MAP3K19Q56UN5 1328 aa11.87□□□□□ -0.51
CLPB-207ENST00000536297 AMPHP49418 695 aa11.87□□□□□ -0.51
CLPB-207ENST00000536297 PRIM1P49642 420 aaKnown RBP11.87□□□□□ -0.51
CLPB-207ENST00000536297 COG3Q96JB2 828 aa11.87□□□□□ -0.51
CLPB-207ENST00000536297 QSER1Q2KHR3 1735 aa11.86□□□□□ -0.51
CLPB-207ENST00000536297 SHANK3Q9BYB0 1731 aa11.86□□□□□ -0.51
CLPB-207ENST00000536297 ST20-MTHFSA0A0A6YYL1 179 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms