RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 MAP4K5Q9Y4K4 846 aa5.94□□□□□ -1.46
SNHG1-202ENST00000535689 V9GY48 417 aaPredicted RBP5.94□□□□□ -1.46
SNHG1-202ENST00000535689 CC2D2AQ9P2K1 1620 aa5.93□□□□□ -1.46
SNHG1-202ENST00000535689 ATP9BO43861 1147 aa5.93□□□□□ -1.46
SNHG1-202ENST00000535689 SLC19A1P41440 591 aa5.93□□□□□ -1.46
SNHG1-202ENST00000535689 USP4Q13107 963 aa5.93□□□□□ -1.46
SNHG1-202ENST00000535689 EML3Q32P44 896 aa5.93□□□□□ -1.46
SNHG1-202ENST00000535689 PTCRAQ6ISU1 281 aaPredicted RBP5.93□□□□□ -1.46
SNHG1-202ENST00000535689 CARD14Q9BXL6 1004 aa5.93□□□□□ -1.46
SNHG1-202ENST00000535689 VRTNQ9H8Y1 702 aa5.93□□□□□ -1.46
SNHG1-202ENST00000535689 BICRAQ9NZM4 1560 aa5.93□□□□□ -1.46
SNHG1-202ENST00000535689 POM121CA8CG34 1229 aa5.92□□□□□ -1.46
SNHG1-202ENST00000535689 ATP5J2-PTCD1G3V325 749 aa5.92□□□□□ -1.46
SNHG1-202ENST00000535689 CSB-PGBD3P0DP91 1061 aa5.92□□□□□ -1.46
SNHG1-202ENST00000535689 SKIP12755 728 aa5.92□□□□□ -1.46
SNHG1-202ENST00000535689 PDIA4P13667 645 aaKnown RBP5.92□□□□□ -1.46
SNHG1-202ENST00000535689 SH3BP2P78314 561 aa5.92□□□□□ -1.46
SNHG1-202ENST00000535689 LINC01559Q495D7 138 aa5.92□□□□□ -1.46
SNHG1-202ENST00000535689 B4GALNT3Q6L9W6 998 aa5.92□□□□□ -1.46
SNHG1-202ENST00000535689 VASH1Q7L8A9 365 aaPredicted RBP5.92□□□□□ -1.46
SNHG1-202ENST00000535689 PALM3A6NDB9 673 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-202ENST00000535689 MYCP01106 439 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-202ENST00000535689 RFX1P22670 979 aa5.91□□□□□ -1.46
SNHG1-202ENST00000535689 LMOD1P29536 600 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-202ENST00000535689 ERFEQ4G0M1 354 aa5.91□□□□□ -1.46
SNHG1-202ENST00000535689 LARP1Q6PKG0 1096 aaKnown RBP5.91□□□□□ -1.46
SNHG1-202ENST00000535689 TRIM67Q6ZTA4 783 aa5.91□□□□□ -1.46
SNHG1-202ENST00000535689 PLEKHM2Q8IWE5 1019 aa5.91□□□□□ -1.46
SNHG1-202ENST00000535689 TFIP11Q9UBB9 837 aaKnown RBP5.91□□□□□ -1.46
SNHG1-202ENST00000535689 NOD1Q9Y239 953 aa5.91□□□□□ -1.46
SNHG1-202ENST00000535689 NR5A1Q13285 461 aa5.9□□□□□ -1.46
SNHG1-202ENST00000535689 RC3H1Q5TC82 1133 aaKnown RBP5.9□□□□□ -1.46
SNHG1-202ENST00000535689 SPRYD7Q5W111 196 aa5.9□□□□□ -1.46
SNHG1-202ENST00000535689 ZNF598Q86UK7 904 aaKnown RBP5.9□□□□□ -1.46
SNHG1-202ENST00000535689 C1QTNF2Q9BXJ5 285 aa5.9□□□□□ -1.46
SNHG1-202ENST00000535689 TNFRSF10AO00220 468 aa5.89□□□□□ -1.47
SNHG1-202ENST00000535689 WNT7AO00755 349 aa5.89□□□□□ -1.47
SNHG1-202ENST00000535689 LCE2BO14633 110 aa5.89□□□□□ -1.47
SNHG1-202ENST00000535689 GFRA3O60609 400 aa5.89□□□□□ -1.47
SNHG1-202ENST00000535689 GPR37L1O60883 481 aa5.89□□□□□ -1.47
SNHG1-202ENST00000535689 ZNF697Q5TEC3 545 aa5.89□□□□□ -1.47
SNHG1-202ENST00000535689 Q6ZNB5 142 aa5.89□□□□□ -1.47
SNHG1-202ENST00000535689 KCTD15Q96SI1 283 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-202ENST00000535689 PGPEP1Q9NXJ5 209 aa5.89□□□□□ -1.47
SNHG1-202ENST00000535689 DOLKQ9UPQ8 538 aa5.89□□□□□ -1.47
SNHG1-202ENST00000535689 USTQ9Y2C2 406 aa5.89□□□□□ -1.47
SNHG1-202ENST00000535689 PLPP7Q8NBV4 271 aa5.88□□□□□ -1.47
SNHG1-202ENST00000535689 FOXJ1Q92949 421 aa5.88□□□□□ -1.47
SNHG1-202ENST00000535689 CDK15Q96Q40 435 aa5.88□□□□□ -1.47
SNHG1-202ENST00000535689 C1orf115Q9H7X2 142 aa5.88□□□□□ -1.47
SNHG1-202ENST00000535689 WASF2Q9Y6W5 498 aa5.88□□□□□ -1.47
SNHG1-202ENST00000535689 USP17L5A8MUK1 530 aa5.87□□□□□ -1.47
SNHG1-202ENST00000535689 FOXC1Q12948 553 aa5.87□□□□□ -1.47
SNHG1-202ENST00000535689 ARID5BQ14865 1188 aa5.87□□□□□ -1.47
SNHG1-202ENST00000535689 KCTD17Q8N5Z5 321 aa5.87□□□□□ -1.47
SNHG1-202ENST00000535689 PDZRN3Q9UPQ7 1066 aa5.87□□□□□ -1.47
SNHG1-202ENST00000535689 MAFBQ9Y5Q3 323 aaPredicted RBP5.87□□□□□ -1.47
SNHG1-202ENST00000535689 EMILIN1Q9Y6C2 1016 aa5.87□□□□□ -1.47
SNHG1-202ENST00000535689 USP17L3A6NCW0 530 aa5.86□□□□□ -1.47
SNHG1-202ENST00000535689 USP17L4A6NCW7 530 aa5.86□□□□□ -1.47
SNHG1-202ENST00000535689 FAM196BA6NMK8 535 aa5.86□□□□□ -1.47
SNHG1-202ENST00000535689 ATG7O95352 703 aa5.86□□□□□ -1.47
SNHG1-202ENST00000535689 ELOAQ14241 798 aaKnown RBP5.86□□□□□ -1.47
SNHG1-202ENST00000535689 LAPTM4AQ15012 233 aa5.86□□□□□ -1.47
SNHG1-202ENST00000535689 USP17L2Q6R6M4 530 aa5.86□□□□□ -1.47
SNHG1-202ENST00000535689 USP17L1Q7RTZ2 530 aa5.86□□□□□ -1.47
SNHG1-202ENST00000535689 CYP4X1Q8N118 509 aa5.86□□□□□ -1.47
SNHG1-202ENST00000535689 EIF4G1Q04637 1599 aaKnown RBP5.85□□□□□ -1.47
SNHG1-202ENST00000535689 TTC24A2A3L6 582 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-202ENST00000535689 ESPNB1AK53 854 aa5.85□□□□□ -1.47
SNHG1-202ENST00000535689 GDF9O60383 454 aa5.85□□□□□ -1.47
SNHG1-202ENST00000535689 TBC1D9Q6ZT07 1266 aa5.85□□□□□ -1.47
SNHG1-202ENST00000535689 CCDC116Q8IYX3 515 aa5.85□□□□□ -1.47
SNHG1-202ENST00000535689 PHTF2Q8N3S3 785 aa5.85□□□□□ -1.47
SNHG1-202ENST00000535689 LARGE2Q8N3Y3 721 aa5.85□□□□□ -1.47
SNHG1-202ENST00000535689 SNIP1Q8TAD8 396 aaKnown RBP5.85□□□□□ -1.47
SNHG1-202ENST00000535689 ADAMTS19Q8TE59 1207 aa5.85□□□□□ -1.47
SNHG1-202ENST00000535689 PKD2L1Q9P0L9 805 aa5.85□□□□□ -1.47
SNHG1-202ENST00000535689 MKRN1Q9UHC7 482 aaKnown RBP5.85□□□□□ -1.47
SNHG1-202ENST00000535689 CHIC2Q9UKJ5 165 aa5.85□□□□□ -1.47
SNHG1-202ENST00000535689 MTMR7Q9Y216 660 aa5.85□□□□□ -1.47
SNHG1-202ENST00000535689 CUX2O14529 1486 aa5.84□□□□□ -1.47
SNHG1-202ENST00000535689 GIGYF1O75420 1035 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-202ENST00000535689 ADH1CP00326 375 aa5.84□□□□□ -1.47
SNHG1-202ENST00000535689 RASA1P20936 1047 aa5.84□□□□□ -1.47
SNHG1-202ENST00000535689 MYT1Q01538 1121 aa5.84□□□□□ -1.47
SNHG1-202ENST00000535689 ESCO1Q5FWF5 840 aa5.84□□□□□ -1.47
SNHG1-202ENST00000535689 CFAP70Q5T0N1 1121 aa5.84□□□□□ -1.47
SNHG1-202ENST00000535689 CDCA7Q9BWT1 371 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-202ENST00000535689 PCDHB11Q9Y5F2 797 aa5.84□□□□□ -1.47
SNHG1-202ENST00000535689 ZBTB7CA1YPR0 619 aa5.83□□□□□ -1.48
SNHG1-202ENST00000535689 NRG2O14511 850 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-202ENST00000535689 BACH1O14867 736 aa5.83□□□□□ -1.48
SNHG1-202ENST00000535689 PSME1Q06323 249 aa5.83□□□□□ -1.48
SNHG1-202ENST00000535689 NCOA4Q13772 614 aa5.83□□□□□ -1.48
SNHG1-202ENST00000535689 OXLD1Q5BKU9 147 aa5.83□□□□□ -1.48
SNHG1-202ENST00000535689 CC2D2BQ6DHV5 1058 aa5.83□□□□□ -1.48
SNHG1-202ENST00000535689 CYP2U1Q7Z449 544 aa5.83□□□□□ -1.48
SNHG1-202ENST00000535689 FAM200AQ8TCP9 573 aa5.83□□□□□ -1.48
SNHG1-202ENST00000535689 UCN2Q96RP3 112 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms