RNA–Protein interactions for RNA: ENST00000534903.1

NPIPB3-206, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-206ENST00000534903 PSDA5PKW4 1024 aaPredicted RBP7.27□□□□□ -1.25
NPIPB3-206ENST00000534903 PDE3BQ13370 1112 aa7.27□□□□□ -1.25
NPIPB3-206ENST00000534903 NUDCQ9Y266 331 aa7.27□□□□□ -1.25
NPIPB3-206ENST00000534903 COL3A1P02461 1466 aaPredicted RBP7.26□□□□□ -1.25
NPIPB3-206ENST00000534903 NGEFQ8N5V2 710 aa7.26□□□□□ -1.25
NPIPB3-206ENST00000534903 NUDT16Q96DE0 195 aaKnown RBP7.26□□□□□ -1.25
NPIPB3-206ENST00000534903 CFAP53Q96M91 514 aa7.26□□□□□ -1.25
NPIPB3-206ENST00000534903 CABP1Q9NZU7 370 aa7.26□□□□□ -1.25
NPIPB3-206ENST00000534903 ATF5Q9Y2D1 282 aaPredicted RBP7.26□□□□□ -1.25
NPIPB3-206ENST00000534903 CCDC61Q9Y6R9 512 aa7.26□□□□□ -1.25
NPIPB3-206ENST00000534903 PRR36Q9H6K5 1346 aa7.26□□□□□ -1.25
NPIPB3-206ENST00000534903 USP54Q70EL1 1684 aa7.25□□□□□ -1.25
NPIPB3-206ENST00000534903 LHX8Q68G74 356 aa7.25□□□□□ -1.25
NPIPB3-206ENST00000534903 KRT27Q7Z3Y8 459 aa7.25□□□□□ -1.25
NPIPB3-206ENST00000534903 SEPT12Q8IYM1 358 aa7.25□□□□□ -1.25
NPIPB3-206ENST00000534903 ORAI2Q96SN7 254 aa7.25□□□□□ -1.25
NPIPB3-206ENST00000534903 ZBTB12Q9Y330 459 aaPredicted RBP7.25□□□□□ -1.25
NPIPB3-206ENST00000534903 NPHP3Q7Z494 1330 aa7.25□□□□□ -1.25
NPIPB3-206ENST00000534903 AATKQ6ZMQ8 1374 aa7.24□□□□□ -1.25
NPIPB3-206ENST00000534903 COL22A1Q8NFW1 1626 aaPredicted RBP7.24□□□□□ -1.25
NPIPB3-206ENST00000534903 SLIT2O94813 1529 aa7.24□□□□□ -1.25
NPIPB3-206ENST00000534903 PLEKHG3A1L390 1219 aa7.24□□□□□ -1.25
NPIPB3-206ENST00000534903 FYB1O15117 783 aa7.24□□□□□ -1.25
NPIPB3-206ENST00000534903 VPS72Q15906 364 aa7.24□□□□□ -1.25
NPIPB3-206ENST00000534903 ZNF692Q9BU19 519 aaPredicted RBP7.24□□□□□ -1.25
NPIPB3-206ENST00000534903 ADAMTS8Q9UP79 889 aa7.24□□□□□ -1.25
NPIPB3-206ENST00000534903 SUPT16HQ9Y5B9 1047 aaKnown RBP7.24□□□□□ -1.25
NPIPB3-206ENST00000534903 USP6P35125 1406 aa7.24□□□□□ -1.25
NPIPB3-206ENST00000534903 R3HDM1Q15032 1099 aaKnown RBP7.23□□□□□ -1.25
NPIPB3-206ENST00000534903 ERICH6BQ5W0A0 696 aa7.23□□□□□ -1.25
NPIPB3-206ENST00000534903 GGNBP2Q9H3C7 697 aa7.23□□□□□ -1.25
NPIPB3-206ENST00000534903 OVOS2A0A0J9YW53 1432 aa7.23□□□□□ -1.25
NPIPB3-206ENST00000534903 OVOS2Q6IE36 1432 aa7.23□□□□□ -1.25
NPIPB3-206ENST00000534903 GLI3P10071 1580 aa7.22□□□□□ -1.25
NPIPB3-206ENST00000534903 SSH2Q76I76 1423 aa7.22□□□□□ -1.25
NPIPB3-206ENST00000534903 MTHFSP49914 203 aa7.22□□□□□ -1.25
NPIPB3-206ENST00000534903 TTC21AQ8NDW8 1320 aa7.22□□□□□ -1.25
NPIPB3-206ENST00000534903 ZNF521Q96K83 1311 aa7.22□□□□□ -1.25
NPIPB3-206ENST00000534903 RGPD8O14715 1765 aaPredicted RBP7.21□□□□□ -1.25
NPIPB3-206ENST00000534903 DISP2A7MBM2 1401 aa7.21□□□□□ -1.25
NPIPB3-206ENST00000534903 TNNT2P45379 298 aaPredicted RBP7.21□□□□□ -1.26
NPIPB3-206ENST00000534903 EN1Q05925 392 aaPredicted RBP7.21□□□□□ -1.26
NPIPB3-206ENST00000534903 PIK3C2AO00443 1686 aa7.21□□□□□ -1.26
NPIPB3-206ENST00000534903 RNF123Q5XPI4 1314 aa7.21□□□□□ -1.26
NPIPB3-206ENST00000534903 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.21□□□□□ -1.26
NPIPB3-206ENST00000534903 KIF1AQ12756 1690 aa7.2□□□□□ -1.26
NPIPB3-206ENST00000534903 FKBP8Q14318 412 aa7.2□□□□□ -1.26
NPIPB3-206ENST00000534903 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.2□□□□□ -1.26
NPIPB3-206ENST00000534903 RUNDC1Q96C34 613 aa7.2□□□□□ -1.26
NPIPB3-206ENST00000534903 COG3Q96JB2 828 aa7.2□□□□□ -1.26
NPIPB3-206ENST00000534903 FOXD4L1Q9NU39 408 aa7.2□□□□□ -1.26
NPIPB3-206ENST00000534903 ACEP12821 1306 aa7.2□□□□□ -1.26
NPIPB3-206ENST00000534903 TTC21BQ7Z4L5 1316 aa7.2□□□□□ -1.26
NPIPB3-206ENST00000534903 MAP2P11137 1827 aaKnown RBP7.2□□□□□ -1.26
NPIPB3-206ENST00000534903 USP31Q70CQ4 1352 aa7.2□□□□□ -1.26
NPIPB3-206ENST00000534903 PXDNQ92626 1479 aa7.19□□□□□ -1.26
NPIPB3-206ENST00000534903 FOXO3O43524 673 aa7.19□□□□□ -1.26
NPIPB3-206ENST00000534903 ESCO1Q5FWF5 840 aa7.19□□□□□ -1.26
NPIPB3-206ENST00000534903 NME9Q86XW9 330 aa7.19□□□□□ -1.26
NPIPB3-206ENST00000534903 MARF1Q9Y4F3 1742 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-206ENST00000534903 SENP3-EIF4A1A0A087X0R7 540 aa7.18□□□□□ -1.26
NPIPB3-206ENST00000534903 C19orf67A6NJJ6 358 aa7.18□□□□□ -1.26
NPIPB3-206ENST00000534903 GABBR2O75899 941 aa7.18□□□□□ -1.26
NPIPB3-206ENST00000534903 CCDC146Q8IYE0 955 aa7.18□□□□□ -1.26
NPIPB3-206ENST00000534903 PELP1Q8IZL8 1130 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-206ENST00000534903 CAMKK2Q96RR4 588 aa7.18□□□□□ -1.26
NPIPB3-206ENST00000534903 PNNQ9H307 717 aaKnown RBP7.18□□□□□ -1.26
NPIPB3-206ENST00000534903 SPATA31A3Q5VYP0 1347 aa7.18□□□□□ -1.26
NPIPB3-206ENST00000534903 APAF1O14727 1248 aa7.17□□□□□ -1.26
NPIPB3-206ENST00000534903 DIAPH1O60610 1272 aaKnown RBP7.17□□□□□ -1.26
NPIPB3-206ENST00000534903 C1QTNF8P60827 252 aa7.17□□□□□ -1.26
NPIPB3-206ENST00000534903 GOLGA2Q08379 1002 aa7.17□□□□□ -1.26
NPIPB3-206ENST00000534903 CCDC27Q2M243 656 aa7.17□□□□□ -1.26
NPIPB3-206ENST00000534903 ZNF784Q8NCA9 323 aaPredicted RBP7.17□□□□□ -1.26
NPIPB3-206ENST00000534903 POLKQ9UBT6 870 aa7.17□□□□□ -1.26
NPIPB3-206ENST00000534903 CCDC9Q9Y3X0 531 aaKnown RBP7.17□□□□□ -1.26
NPIPB3-206ENST00000534903 KIF24Q5T7B8 1368 aa7.17□□□□□ -1.26
NPIPB3-206ENST00000534903 RGPD1P0DJD0 1748 aa7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 PEAK1Q9H792 1746 aa7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 E9PSI1 815 aa7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 U2AF1L5P0DN76 240 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 U2AF1Q01081 240 aaKnown RBP eCLIP7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 EZH2Q15910 746 aaKnown RBP7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 DUSP27Q5VZP5 1158 aa7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 NGDNQ8NEJ9 315 aaKnown RBP7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 SPON1Q9HCB6 807 aa7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 RCAN3Q9UKA8 241 aa7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 SALL2Q9Y467 1007 aaPredicted RBP7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 MAPK8IP3Q9UPT6 1336 aa7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 PHRF1Q9P1Y6 1649 aaKnown RBP7.16□□□□□ -1.26
NPIPB3-206ENST00000534903 A0A0G2JS52 829 aa7.15□□□□□ -1.26
NPIPB3-206ENST00000534903 NUTM2FA1L443 756 aa7.15□□□□□ -1.26
NPIPB3-206ENST00000534903 KCNQ2O43526 872 aa7.15□□□□□ -1.26
NPIPB3-206ENST00000534903 HAP1P54257 671 aaPredicted RBP7.15□□□□□ -1.26
NPIPB3-206ENST00000534903 RRP1P56182 461 aaKnown RBP7.15□□□□□ -1.26
NPIPB3-206ENST00000534903 MYT1Q01538 1121 aa7.15□□□□□ -1.26
NPIPB3-206ENST00000534903 XPCQ01831 940 aaPredicted RBP7.15□□□□□ -1.26
NPIPB3-206ENST00000534903 SLFN5Q08AF3 891 aa7.15□□□□□ -1.26
NPIPB3-206ENST00000534903 NBPF14Q5TI25 921 aa7.15□□□□□ -1.26
NPIPB3-206ENST00000534903 TRMT2AQ8IZ69 625 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms