RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 WDR17Q8IZU2 1322 aa26.15■■□□□ 1.78
CTSB-233ENST00000534636 TMC1Q8TDI8 760 aa26.15■■□□□ 1.78
CTSB-233ENST00000534636 OVOS2A0A0G2JMS6 1433 aa26.14■■□□□ 1.78
CTSB-233ENST00000534636 OVOS2A0A0J9YW53 1432 aa26.14■■□□□ 1.78
CTSB-233ENST00000534636 OVOS2Q6IE36 1432 aa26.14■■□□□ 1.78
CTSB-233ENST00000534636 CSB-PGBD3P0DP91 1061 aa26.14■■□□□ 1.78
CTSB-233ENST00000534636 ARHGEF25Q86VW2 580 aa26.14■■□□□ 1.78
CTSB-233ENST00000534636 NFAT5O94916 1531 aa26.14■■□□□ 1.77
CTSB-233ENST00000534636 ABCC6O95255 1503 aa26.14■■□□□ 1.77
CTSB-233ENST00000534636 HDGFL2Q7Z4V5 671 aaPredicted RBP26.13■■□□□ 1.77
CTSB-233ENST00000534636 CAMKK2Q96RR4 588 aa26.13■■□□□ 1.77
CTSB-233ENST00000534636 RREB1Q92766 1687 aa26.12■■□□□ 1.77
CTSB-233ENST00000534636 R3HDM1Q15032 1099 aaKnown RBP26.12■■□□□ 1.77
CTSB-233ENST00000534636 DDB1Q16531 1140 aa26.12■■□□□ 1.77
CTSB-233ENST00000534636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.12■■□□□ 1.77
CTSB-233ENST00000534636 USP54Q70EL1 1684 aa26.12■■□□□ 1.77
CTSB-233ENST00000534636 CDCA7Q9BWT1 371 aaPredicted RBP26.11■■□□□ 1.77
CTSB-233ENST00000534636 AXIN2Q9Y2T1 843 aa26.11■■□□□ 1.77
CTSB-233ENST00000534636 PEAK1Q9H792 1746 aa26.09■■□□□ 1.77
CTSB-233ENST00000534636 CD163L1Q9NR16 1453 aa26.09■■□□□ 1.77
CTSB-233ENST00000534636 NUP188Q5SRE5 1749 aa26.08■■□□□ 1.77
CTSB-233ENST00000534636 TRIM26Q12899 539 aaPredicted RBP26.08■■□□□ 1.77
CTSB-233ENST00000534636 TERF2IPQ9NYB0 399 aa26.08■■□□□ 1.77
CTSB-233ENST00000534636 USP31Q70CQ4 1352 aa26.07■■□□□ 1.76
CTSB-233ENST00000534636 LTN1O94822 1766 aa26.07■■□□□ 1.76
CTSB-233ENST00000534636 SBF2Q86WG5 1849 aa26.07■■□□□ 1.76
CTSB-233ENST00000534636 EDC4Q6P2E9 1401 aaKnown RBP26.07■■□□□ 1.76
CTSB-233ENST00000534636 CARD10Q9BWT7 1032 aa26.06■■□□□ 1.76
CTSB-233ENST00000534636 NBPF14Q5TI25 921 aa26.05■■□□□ 1.76
CTSB-233ENST00000534636 PUS7Q96PZ0 661 aaKnown RBP26.05■■□□□ 1.76
CTSB-233ENST00000534636 CCDC7Q96M83 1385 aa26.05■■□□□ 1.76
CTSB-233ENST00000534636 RGPD3A6NKT7 1758 aaPredicted RBP26.05■■□□□ 1.76
CTSB-233ENST00000534636 RGPD4Q7Z3J3 1758 aa26.05■■□□□ 1.76
CTSB-233ENST00000534636 NME9Q86XW9 330 aa26.04■■□□□ 1.76
CTSB-233ENST00000534636 SLC12A5Q9H2X9 1139 aa26.04■■□□□ 1.76
CTSB-233ENST00000534636 NINLQ9Y2I6 1382 aa26.04■■□□□ 1.76
CTSB-233ENST00000534636 SLC24A1O60721 1099 aa26.03■■□□□ 1.76
CTSB-233ENST00000534636 A0A1W2PP64 1363 aa26.03■■□□□ 1.76
CTSB-233ENST00000534636 ERBB3P21860 1342 aa25.98■■□□□ 1.75
CTSB-233ENST00000534636 ST20-MTHFSA0A0A6YYL1 179 aa25.98■■□□□ 1.75
CTSB-233ENST00000534636 BCL9O00512 1426 aa25.97■■□□□ 1.75
CTSB-233ENST00000534636 TNS2Q63HR2 1409 aa25.97■■□□□ 1.75
CTSB-233ENST00000534636 EXOC5O00471 708 aa25.97■■□□□ 1.75
CTSB-233ENST00000534636 BCL11BQ9C0K0 894 aaPredicted RBP25.97■■□□□ 1.75
CTSB-233ENST00000534636 MARCH10Q8NA82 808 aaPredicted RBP25.96■■□□□ 1.75
CTSB-233ENST00000534636 TESK2Q96S53 571 aa25.96■■□□□ 1.75
CTSB-233ENST00000534636 NLRP2Q9NX02 1062 aa25.96■■□□□ 1.75
CTSB-233ENST00000534636 PLSCR1O15162 318 aa25.94■■□□□ 1.74
CTSB-233ENST00000534636 FAM208AQ9UK61 1670 aaKnown RBP25.92■■□□□ 1.74
CTSB-233ENST00000534636 ANKRD24Q8TF21 1146 aa25.91■■□□□ 1.74
CTSB-233ENST00000534636 USP47Q96K76 1375 aa25.91■■□□□ 1.74
CTSB-233ENST00000534636 COG3Q96JB2 828 aa25.9■■□□□ 1.74
CTSB-233ENST00000534636 IL2RBP14784 551 aa25.89■■□□□ 1.74
CTSB-233ENST00000534636 TMF1P82094 1093 aa25.89■■□□□ 1.74
CTSB-233ENST00000534636 ANKRD36BQ8N2N9 1353 aa25.89■■□□□ 1.74
CTSB-233ENST00000534636 KAT6BQ8WYB5 2073 aa25.89■■□□□ 1.73
CTSB-233ENST00000534636 NHSQ6T4R5 1651 aa25.87■■□□□ 1.73
CTSB-233ENST00000534636 PTF1AQ7RTS3 328 aa25.86■■□□□ 1.73
CTSB-233ENST00000534636 IP6K1Q92551 441 aa25.85■■□□□ 1.73
CTSB-233ENST00000534636 CDCA8Q53HL2 280 aa25.83■■□□□ 1.73
CTSB-233ENST00000534636 SPON1Q9HCB6 807 aa25.83■■□□□ 1.73
CTSB-233ENST00000534636 LTV1Q96GA3 475 aaPredicted RBP25.82■■□□□ 1.72
CTSB-233ENST00000534636 PPP1R1BQ9UD71 204 aaPredicted RBP25.82■■□□□ 1.72
CTSB-233ENST00000534636 AMPHP49418 695 aa25.81■■□□□ 1.72
CTSB-233ENST00000534636 ANO8Q9HCE9 1232 aaPredicted RBP25.8■■□□□ 1.72
CTSB-233ENST00000534636 KIF20BQ96Q89 1820 aa25.79■■□□□ 1.72
CTSB-233ENST00000534636 KCNQ2O43526 872 aa25.79■■□□□ 1.72
CTSB-233ENST00000534636 TXNRD1Q16881 649 aa25.79■■□□□ 1.72
CTSB-233ENST00000534636 ACSBG1Q96GR2 724 aa25.79■■□□□ 1.72
CTSB-233ENST00000534636 MAP3K19Q56UN5 1328 aa25.79■■□□□ 1.72
CTSB-233ENST00000534636 CASZ1Q86V15 1759 aa25.78■■□□□ 1.72
CTSB-233ENST00000534636 STK32BQ9NY57 414 aa25.78■■□□□ 1.72
CTSB-233ENST00000534636 BTAF1O14981 1849 aa25.78■■□□□ 1.72
CTSB-233ENST00000534636 RTL1A6NKG5 1358 aa25.78■■□□□ 1.72
CTSB-233ENST00000534636 HOXC9P31274 260 aa25.77■■□□□ 1.72
CTSB-233ENST00000534636 PROM2Q8N271 834 aa25.76■■□□□ 1.71
CTSB-233ENST00000534636 TIMELESSQ9UNS1 1208 aa25.76■■□□□ 1.71
CTSB-233ENST00000534636 RGPD2P0DJD1 1756 aa25.74■■□□□ 1.71
CTSB-233ENST00000534636 SMG6Q86US8 1419 aaKnown RBP25.74■■□□□ 1.71
CTSB-233ENST00000534636 CLSPNQ9HAW4 1339 aa25.74■■□□□ 1.71
CTSB-233ENST00000534636 GGNBP2Q9H3C7 697 aa25.73■■□□□ 1.71
CTSB-233ENST00000534636 DDX54Q8TDD1 881 aaKnown RBP25.72■■□□□ 1.71
CTSB-233ENST00000534636 FYB1O15117 783 aa25.71■■□□□ 1.71
CTSB-233ENST00000534636 MYOM1P52179 1685 aa25.71■■□□□ 1.71
CTSB-233ENST00000534636 FBLN1P23142 703 aa25.7■■□□□ 1.7
CTSB-233ENST00000534636 RRS1Q15050 365 aaKnown RBP25.7■■□□□ 1.7
CTSB-233ENST00000534636 SLC15A2Q16348 729 aa25.7■■□□□ 1.7
CTSB-233ENST00000534636 PCGF6Q9BYE7 350 aa25.7■■□□□ 1.7
CTSB-233ENST00000534636 DCAF8L1A6NGE4 600 aa25.68■■□□□ 1.7
CTSB-233ENST00000534636 ZBTB7AO95365 584 aa25.67■■□□□ 1.7
CTSB-233ENST00000534636 DOT1LQ8TEK3 1739 aa25.67■■□□□ 1.7
CTSB-233ENST00000534636 SHANK3Q9BYB0 1731 aa25.66■■□□□ 1.7
CTSB-233ENST00000534636 PAPPAQ13219 1627 aa25.66■■□□□ 1.7
CTSB-233ENST00000534636 NSD3Q9BZ95 1437 aa25.65■■□□□ 1.7
CTSB-233ENST00000534636 MEGF6O75095 1541 aa25.65■■□□□ 1.7
CTSB-233ENST00000534636 SYTL4Q96C24 671 aaPredicted RBP25.65■■□□□ 1.7
CTSB-233ENST00000534636 FLT4P35916 1363 aa25.65■■□□□ 1.7
CTSB-233ENST00000534636 ZCRB1Q8TBF4 217 aaKnown RBP25.64■■□□□ 1.7
CTSB-233ENST00000534636 PDGFDQ9GZP0 370 aaPredicted RBP25.64■■□□□ 1.7
CTSB-233ENST00000534636 KIF24Q5T7B8 1368 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms