RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-223ENST00000534283 AKAP12Q02952 1782 aa34.41■■■■□ 3.1
RELA-223ENST00000534283 PARD3Q8TEW0 1356 aa34.41■■■■□ 3.1
RELA-223ENST00000534283 R3HDM1Q15032 1099 aaKnown RBP34.41■■■■□ 3.1
RELA-223ENST00000534283 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.4■■■■□ 3.1
RELA-223ENST00000534283 NFAT5O94916 1531 aa34.4■■■■□ 3.1
RELA-223ENST00000534283 TMC1Q8TDI8 760 aa34.39■■■■□ 3.1
RELA-223ENST00000534283 C11orf95C9JLR9 678 aaPredicted RBP34.38■■■■□ 3.09
RELA-223ENST00000534283 NME9Q86XW9 330 aa34.38■■■■□ 3.09
RELA-223ENST00000534283 TESK2Q96S53 571 aa34.38■■■■□ 3.09
RELA-223ENST00000534283 CARD10Q9BWT7 1032 aa34.38■■■■□ 3.09
RELA-223ENST00000534283 PARP4Q9UKK3 1724 aaKnown RBP34.36■■■■□ 3.09
RELA-223ENST00000534283 DDB1Q16531 1140 aa34.36■■■■□ 3.09
RELA-223ENST00000534283 HDGFL2Q7Z4V5 671 aaPredicted RBP34.34■■■■□ 3.09
RELA-223ENST00000534283 CDCA7Q9BWT1 371 aaPredicted RBP34.34■■■■□ 3.09
RELA-223ENST00000534283 OVOS2A0A0G2JMS6 1433 aa34.32■■■■□ 3.08
RELA-223ENST00000534283 OVOS2A0A0J9YW53 1432 aa34.32■■■■□ 3.08
RELA-223ENST00000534283 OVOS2Q6IE36 1432 aa34.32■■■■□ 3.08
RELA-223ENST00000534283 ST20-MTHFSA0A0A6YYL1 179 aa34.32■■■■□ 3.08
RELA-223ENST00000534283 LRP5O75197 1615 aa34.31■■■■□ 3.08
RELA-223ENST00000534283 CSB-PGBD3P0DP91 1061 aa34.31■■■■□ 3.08
RELA-223ENST00000534283 MARCH10Q8NA82 808 aaPredicted RBP34.31■■■■□ 3.08
RELA-223ENST00000534283 MON2Q7Z3U7 1717 aa34.3■■■■□ 3.08
RELA-223ENST00000534283 TERF2IPQ9NYB0 399 aa34.3■■■■□ 3.08
RELA-223ENST00000534283 EDC4Q6P2E9 1401 aaKnown RBP34.3■■■■□ 3.08
RELA-223ENST00000534283 A0A1W2PP64 1363 aa34.29■■■■□ 3.08
RELA-223ENST00000534283 PEAK1Q9H792 1746 aa34.28■■■■□ 3.08
RELA-223ENST00000534283 ABCC6O95255 1503 aa34.27■■■■□ 3.08
RELA-223ENST00000534283 PTF1AQ7RTS3 328 aa34.27■■■■□ 3.08
RELA-223ENST00000534283 BCL9O00512 1426 aa34.27■■■■□ 3.08
RELA-223ENST00000534283 LRRC37A3O60309 1634 aa34.26■■■■□ 3.08
RELA-223ENST00000534283 CCDC7Q96M83 1385 aa34.24■■■■□ 3.07
RELA-223ENST00000534283 PLSCR1O15162 318 aa34.24■■■■□ 3.07
RELA-223ENST00000534283 BCL11BQ9C0K0 894 aaPredicted RBP34.24■■■■□ 3.07
RELA-223ENST00000534283 ERBB3P21860 1342 aa34.23■■■■□ 3.07
RELA-223ENST00000534283 USP54Q70EL1 1684 aa34.22■■■■□ 3.07
RELA-223ENST00000534283 EXOC5O00471 708 aa34.21■■■■□ 3.07
RELA-223ENST00000534283 SLC24A1O60721 1099 aa34.21■■■■□ 3.07
RELA-223ENST00000534283 NINLQ9Y2I6 1382 aa34.21■■■■□ 3.07
RELA-223ENST00000534283 NBPF14Q5TI25 921 aa34.2■■■■□ 3.07
RELA-223ENST00000534283 RREB1Q92766 1687 aa34.18■■■■□ 3.06
RELA-223ENST00000534283 NLRP2Q9NX02 1062 aa34.16■■■■□ 3.06
RELA-223ENST00000534283 PROM2Q8N271 834 aa34.15■■■■□ 3.06
RELA-223ENST00000534283 ANKRD24Q8TF21 1146 aa34.15■■■■□ 3.06
RELA-223ENST00000534283 RGPD5Q99666 1765 aa34.15■■■■□ 3.06
RELA-223ENST00000534283 NUP188Q5SRE5 1749 aa34.13■■■■□ 3.05
RELA-223ENST00000534283 IP6K1Q92551 441 aa34.12■■■■□ 3.05
RELA-223ENST00000534283 TNS2Q63HR2 1409 aa34.11■■■■□ 3.05
RELA-223ENST00000534283 WNK3Q9BYP7 1800 aa34.1■■■■□ 3.05
RELA-223ENST00000534283 USP47Q96K76 1375 aa34.1■■■■□ 3.05
RELA-223ENST00000534283 IL2RBP14784 551 aa34.09■■■■□ 3.05
RELA-223ENST00000534283 ANKRD36BQ8N2N9 1353 aa34.08■■■■□ 3.05
RELA-223ENST00000534283 KCNQ2O43526 872 aa34.07■■■■□ 3.04
RELA-223ENST00000534283 TMF1P82094 1093 aa34.07■■■■□ 3.04
RELA-223ENST00000534283 COG3Q96JB2 828 aa34.07■■■■□ 3.04
RELA-223ENST00000534283 ANO8Q9HCE9 1232 aaPredicted RBP34.07■■■■□ 3.04
RELA-223ENST00000534283 FBLN1P23142 703 aa34.05■■■■□ 3.04
RELA-223ENST00000534283 MAP3K19Q56UN5 1328 aa34.04■■■■□ 3.04
RELA-223ENST00000534283 SBF2Q86WG5 1849 aa34.04■■■■□ 3.04
RELA-223ENST00000534283 FYB1O15117 783 aa34.01■■■■□ 3.03
RELA-223ENST00000534283 TXNRD1Q16881 649 aa34.01■■■■□ 3.03
RELA-223ENST00000534283 TIMELESSQ9UNS1 1208 aa34.01■■■■□ 3.03
RELA-223ENST00000534283 RGPD3A6NKT7 1758 aaPredicted RBP34■■■■□ 3.03
RELA-223ENST00000534283 RGPD4Q7Z3J3 1758 aa34■■■■□ 3.03
RELA-223ENST00000534283 HOXC9P31274 260 aa34■■■■□ 3.03
RELA-223ENST00000534283 LTV1Q96GA3 475 aaPredicted RBP33.98■■■■□ 3.03
RELA-223ENST00000534283 LTN1O94822 1766 aa33.98■■■■□ 3.03
RELA-223ENST00000534283 ACSBG1Q96GR2 724 aa33.97■■■■□ 3.03
RELA-223ENST00000534283 SPON1Q9HCB6 807 aa33.97■■■■□ 3.03
RELA-223ENST00000534283 AMPHP49418 695 aa33.94■■■■□ 3.02
RELA-223ENST00000534283 PDGFDQ9GZP0 370 aaPredicted RBP33.94■■■■□ 3.02
RELA-223ENST00000534283 GGNBP2Q9H3C7 697 aa33.94■■■■□ 3.02
RELA-223ENST00000534283 CDCA8Q53HL2 280 aa33.93■■■■□ 3.02
RELA-223ENST00000534283 CLSPNQ9HAW4 1339 aa33.91■■■■□ 3.02
RELA-223ENST00000534283 RRS1Q15050 365 aaKnown RBP33.9■■■■□ 3.02
RELA-223ENST00000534283 CARD14Q9BXL6 1004 aa33.9■■■■□ 3.02
RELA-223ENST00000534283 SLC15A2Q16348 729 aa33.88■■■■□ 3.01
RELA-223ENST00000534283 RTL1A6NKG5 1358 aa33.87■■■■□ 3.01
RELA-223ENST00000534283 DDX54Q8TDD1 881 aaKnown RBP33.87■■■■□ 3.01
RELA-223ENST00000534283 STK32BQ9NY57 414 aa33.87■■■■□ 3.01
RELA-223ENST00000534283 NHSQ6T4R5 1651 aa33.86■■■■□ 3.01
RELA-223ENST00000534283 PCGF6Q9BYE7 350 aa33.85■■■■□ 3.01
RELA-223ENST00000534283 NBPF6Q5VWK0 638 aa33.84■■■■□ 3.01
RELA-223ENST00000534283 NBPF4Q96M43 638 aa33.84■■■■□ 3.01
RELA-223ENST00000534283 PPP1R1BQ9UD71 204 aaPredicted RBP33.81■■■■□ 3
RELA-223ENST00000534283 ZBTB7AO95365 584 aa33.8■■■■□ 3
RELA-223ENST00000534283 PTGER2P43116 358 aa33.8■■■■□ 3
RELA-223ENST00000534283 ZCRB1Q8TBF4 217 aaKnown RBP33.8■■■■□ 3
RELA-223ENST00000534283 LRRC4BQ9NT99 713 aa33.8■■■■□ 3
RELA-223ENST00000534283 CASZ1Q86V15 1759 aa33.8■■■■□ 3
RELA-223ENST00000534283 HSP90AB2PQ58FF8 381 aa33.79■■■■□ 3
RELA-223ENST00000534283 MEGF6O75095 1541 aa33.79■■■■□ 3
RELA-223ENST00000534283 FAM208AQ9UK61 1670 aaKnown RBP33.77■■■■□ 3
RELA-223ENST00000534283 INSRP06213 1382 aa33.76■■■■□ 3
RELA-223ENST00000534283 PRIM1P49642 420 aaKnown RBP33.75■■■□□ 2.99
RELA-223ENST00000534283 USHBP1Q8N6Y0 703 aa33.75■■■□□ 2.99
RELA-223ENST00000534283 ATF5Q9Y2D1 282 aaPredicted RBP33.75■■■□□ 2.99
RELA-223ENST00000534283 KIF24Q5T7B8 1368 aa33.74■■■□□ 2.99
RELA-223ENST00000534283 NSD3Q9BZ95 1437 aa33.74■■■□□ 2.99
RELA-223ENST00000534283 ZNF827Q17R98 1081 aa33.73■■■□□ 2.99
RELA-223ENST00000534283 CGNL1Q0VF96 1302 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms