RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-215	ENST00000533946	BARGIN	Q6ZT62	677 aa		13.58	□□□□□ -0.24
SSBP3-215	ENST00000533946	MYOM1	P52179	1685 aa		13.58	□□□□□ -0.24
SSBP3-215	ENST00000533946	OVOS2	A0A0J9YW53	1432 aa		13.57	□□□□□ -0.24
SSBP3-215	ENST00000533946	CRB1	P82279	1406 aa		13.57	□□□□□ -0.24
SSBP3-215	ENST00000533946	OVOS2	Q6IE36	1432 aa		13.57	□□□□□ -0.24
SSBP3-215	ENST00000533946	EDC4	Q6P2E9	1401 aa	Known RBP	13.57	□□□□□ -0.24
SSBP3-215	ENST00000533946	TOM1L2	Q6ZVM7	507 aa		13.57	□□□□□ -0.24
SSBP3-215	ENST00000533946	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.57	□□□□□ -0.24
SSBP3-215	ENST00000533946	WNK3	Q9BYP7	1800 aa		13.57	□□□□□ -0.24
SSBP3-215	ENST00000533946	LRRC37A3	O60309	1634 aa		13.57	□□□□□ -0.24
SSBP3-215	ENST00000533946	PARP4	Q9UKK3	1724 aa	Known RBP	13.56	□□□□□ -0.24
SSBP3-215	ENST00000533946	RGPD2	P0DJD1	1756 aa		13.56	□□□□□ -0.24
SSBP3-215	ENST00000533946	PSD	A5PKW4	1024 aa	Predicted RBP	13.56	□□□□□ -0.24
SSBP3-215	ENST00000533946	C11orf95	C9JLR9	678 aa	Predicted RBP	13.56	□□□□□ -0.24
SSBP3-215	ENST00000533946	EZH2	Q15910	746 aa	Known RBP	13.56	□□□□□ -0.24
SSBP3-215	ENST00000533946	GGNBP2	Q9H3C7	697 aa		13.56	□□□□□ -0.24
SSBP3-215	ENST00000533946	WDR17	Q8IZU2	1322 aa		13.56	□□□□□ -0.24
SSBP3-215	ENST00000533946	PEAK1	Q9H792	1746 aa		13.56	□□□□□ -0.24
SSBP3-215	ENST00000533946	MARCH10	Q8NA82	808 aa	Predicted RBP	13.55	□□□□□ -0.24
SSBP3-215	ENST00000533946	TERF2IP	Q9NYB0	399 aa		13.55	□□□□□ -0.24
SSBP3-215	ENST00000533946	FYB1	O15117	783 aa		13.54	□□□□□ -0.24
SSBP3-215	ENST00000533946	HSPA5	P11021	654 aa	Known RBP	13.54	□□□□□ -0.24
SSBP3-215	ENST00000533946	CCDC125	Q86Z20	511 aa		13.54	□□□□□ -0.24
SSBP3-215	ENST00000533946	KCNH5	Q8NCM2	988 aa		13.54	□□□□□ -0.24
SSBP3-215	ENST00000533946	LTV1	Q96GA3	475 aa	Predicted RBP	13.54	□□□□□ -0.24
SSBP3-215	ENST00000533946	PUS7	Q96PZ0	661 aa	Known RBP	13.54	□□□□□ -0.24
SSBP3-215	ENST00000533946	DISP2	A7MBM2	1401 aa		13.54	□□□□□ -0.24
SSBP3-215	ENST00000533946	RGPD1	P0DJD0	1748 aa		13.53	□□□□□ -0.24
SSBP3-215	ENST00000533946	SBF2	Q86WG5	1849 aa		13.53	□□□□□ -0.24
SSBP3-215	ENST00000533946	TMF1	P82094	1093 aa		13.53	□□□□□ -0.24
SSBP3-215	ENST00000533946	RRS1	Q15050	365 aa	Known RBP	13.53	□□□□□ -0.24
SSBP3-215	ENST00000533946	CSB-PGBD3	P0DP91	1061 aa		13.52	□□□□□ -0.25
SSBP3-215	ENST00000533946	PDE3B	Q13370	1112 aa		13.52	□□□□□ -0.25
SSBP3-215	ENST00000533946	CAMKK2	Q96RR4	588 aa		13.52	□□□□□ -0.25
SSBP3-215	ENST00000533946	POLR3GL	Q9BT43	218 aa		13.52	□□□□□ -0.25
SSBP3-215	ENST00000533946	MAP3K19	Q56UN5	1328 aa		13.52	□□□□□ -0.25
SSBP3-215	ENST00000533946	CLSPN	Q9HAW4	1339 aa		13.52	□□□□□ -0.25
SSBP3-215	ENST00000533946	ANKRD36B	Q8N2N9	1353 aa		13.52	□□□□□ -0.25
SSBP3-215	ENST00000533946	ANKRD24	Q8TF21	1146 aa		13.51	□□□□□ -0.25
SSBP3-215	ENST00000533946	CARD10	Q9BWT7	1032 aa		13.51	□□□□□ -0.25
SSBP3-215	ENST00000533946	ERBB3	P21860	1342 aa		13.5	□□□□□ -0.25
SSBP3-215	ENST00000533946	APBA3	O96018	575 aa		13.5	□□□□□ -0.25
SSBP3-215	ENST00000533946	FAM196A	Q6ZSG2	479 aa		13.5	□□□□□ -0.25
SSBP3-215	ENST00000533946	NLRP2	Q9NX02	1062 aa		13.5	□□□□□ -0.25
SSBP3-215	ENST00000533946	THRAP3	Q9Y2W1	955 aa	Known RBP	13.5	□□□□□ -0.25
SSBP3-215	ENST00000533946	KCNQ2	O43526	872 aa		13.49	□□□□□ -0.25
SSBP3-215	ENST00000533946	SF3B2	Q13435	895 aa	Known RBP	13.49	□□□□□ -0.25
SSBP3-215	ENST00000533946	DDB1	Q16531	1140 aa		13.49	□□□□□ -0.25
SSBP3-215	ENST00000533946	TIMELESS	Q9UNS1	1208 aa		13.49	□□□□□ -0.25
SSBP3-215	ENST00000533946	KIF20B	Q96Q89	1820 aa		13.48	□□□□□ -0.25
SSBP3-215	ENST00000533946	HOXC9	P31274	260 aa		13.48	□□□□□ -0.25
SSBP3-215	ENST00000533946	BAG6	P46379	1132 aa		13.48	□□□□□ -0.25
SSBP3-215	ENST00000533946	R3HDM1	Q15032	1099 aa	Known RBP	13.48	□□□□□ -0.25
SSBP3-215	ENST00000533946	USHBP1	Q8N6Y0	703 aa		13.48	□□□□□ -0.25
SSBP3-215	ENST00000533946	IP6K1	Q92551	441 aa		13.48	□□□□□ -0.25
SSBP3-215	ENST00000533946	COG3	Q96JB2	828 aa		13.48	□□□□□ -0.25
SSBP3-215	ENST00000533946	NSD3	Q9BZ95	1437 aa		13.47	□□□□□ -0.25
SSBP3-215	ENST00000533946	PROM2	Q8N271	834 aa		13.47	□□□□□ -0.25
SSBP3-215	ENST00000533946	NUP188	Q5SRE5	1749 aa		13.47	□□□□□ -0.25
SSBP3-215	ENST00000533946	FAM208A	Q9UK61	1670 aa	Known RBP	13.47	□□□□□ -0.25
SSBP3-215	ENST00000533946	HSP90AB2P	Q58FF8	381 aa		13.46	□□□□□ -0.25
SSBP3-215	ENST00000533946	ACSBG1	Q96GR2	724 aa		13.46	□□□□□ -0.25
SSBP3-215	ENST00000533946	EMILIN1	Q9Y6C2	1016 aa		13.46	□□□□□ -0.25
SSBP3-215	ENST00000533946	RREB1	Q92766	1687 aa		13.46	□□□□□ -0.26
SSBP3-215	ENST00000533946	NINL	Q9Y2I6	1382 aa		13.45	□□□□□ -0.26
SSBP3-215	ENST00000533946	NBPF6	Q5VWK0	638 aa		13.45	□□□□□ -0.26
SSBP3-215	ENST00000533946	NBPF4	Q96M43	638 aa		13.45	□□□□□ -0.26
SSBP3-215	ENST00000533946	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.45	□□□□□ -0.26
SSBP3-215	ENST00000533946	ABCC6	O95255	1503 aa		13.44	□□□□□ -0.26
SSBP3-215	ENST00000533946	OVOS2	A0A0G2JMS6	1433 aa		13.44	□□□□□ -0.26
SSBP3-215	ENST00000533946	SHANK3	Q9BYB0	1731 aa		13.44	□□□□□ -0.26
SSBP3-215	ENST00000533946	AMPH	P49418	695 aa		13.43	□□□□□ -0.26
SSBP3-215	ENST00000533946	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.43	□□□□□ -0.26	8e-7	■■■■□ 25.5
SSBP3-215	ENST00000533946	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.43	□□□□□ -0.26
SSBP3-215	ENST00000533946	MEGF6	O75095	1541 aa		13.43	□□□□□ -0.26
SSBP3-215	ENST00000533946	TNS2	Q63HR2	1409 aa		13.42	□□□□□ -0.26
SSBP3-215	ENST00000533946	EXOC5	O00471	708 aa		13.42	□□□□□ -0.26
SSBP3-215	ENST00000533946	TNNT2	P45379	298 aa	Predicted RBP	13.42	□□□□□ -0.26
SSBP3-215	ENST00000533946	PANK3	Q9H999	370 aa		13.42	□□□□□ -0.26
SSBP3-215	ENST00000533946	KAT6B	Q8WYB5	2073 aa		13.42	□□□□□ -0.26
SSBP3-215	ENST00000533946	CCDC7	Q96M83	1385 aa		13.42	□□□□□ -0.26
SSBP3-215	ENST00000533946	IL2RB	P14784	551 aa		13.41	□□□□□ -0.26
SSBP3-215	ENST00000533946	MAP2	P11137	1827 aa	Known RBP	13.41	□□□□□ -0.26
SSBP3-215	ENST00000533946	KCNQ4	P56696	695 aa		13.4	□□□□□ -0.26
SSBP3-215	ENST00000533946	DDX54	Q8TDD1	881 aa	Known RBP	13.4	□□□□□ -0.26
SSBP3-215	ENST00000533946	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.4	□□□□□ -0.26
SSBP3-215	ENST00000533946	PPM1G	O15355	546 aa	Predicted RBP	13.38	□□□□□ -0.27
SSBP3-215	ENST00000533946	CDCA8	Q53HL2	280 aa		13.38	□□□□□ -0.27
SSBP3-215	ENST00000533946	POLK	Q9UBT6	870 aa		13.38	□□□□□ -0.27
SSBP3-215	ENST00000533946	BTAF1	O14981	1849 aa		13.38	□□□□□ -0.27
SSBP3-215	ENST00000533946	NHS	Q6T4R5	1651 aa		13.37	□□□□□ -0.27
SSBP3-215	ENST00000533946	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.37	□□□□□ -0.27
SSBP3-215	ENST00000533946	KIF7	Q2M1P5	1343 aa		13.37	□□□□□ -0.27
SSBP3-215	ENST00000533946	SLC24A1	O60721	1099 aa		13.36	□□□□□ -0.27
SSBP3-215	ENST00000533946	BCL9	O00512	1426 aa		13.36	□□□□□ -0.27
SSBP3-215	ENST00000533946	ANKRD26	Q9UPS8	1709 aa		13.36	□□□□□ -0.27
SSBP3-215	ENST00000533946	INSR	P06213	1382 aa		13.35	□□□□□ -0.27
SSBP3-215	ENST00000533946	TXNRD1	Q16881	649 aa		13.35	□□□□□ -0.27
SSBP3-215	ENST00000533946	LRRC4B	Q9NT99	713 aa		13.35	□□□□□ -0.27
SSBP3-215	ENST00000533946	DOT1L	Q8TEK3	1739 aa		13.35	□□□□□ -0.27

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